Automatic summarization of changes in image sequences using algorithmic information theory

2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI

Volumn , Issue , 2008, Pages 859-862

  Cohen, Andrew R ^a   Bjornsson, Christopher ^a   Chen, Ying ^a   Banker, Gary ^b   Ladi, Ena ^c   Robey, Ellen ^c   Temple, Sally ^d   Roysam, Badrinath ^a  

^a RENSSELAER POLYTECHNIC INSTITUTE   (United States)

^b OREGON HEALTH AND SCIENCE UNIVERSITY   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

^d ALBANY MEDICAL COLLEGE   (United States)

Author keywords

Algorithmic information theory; Algorithmic statistics; Clustering; Gap statistic; Information distance

Indexed keywords

CLUSTERING ALGORITHMS; INFORMATION THEORY; NEURONS; PAINTING; SPECIFICATIONS; TECHNICAL PRESENTATIONS;

ALGORITHMIC INFORMATION THEORY; ALGORITHMIC STATISTICS; CLUSTERING; GAP STATISTIC; INFORMATION DISTANCE;

STATISTICAL METHODS;

EID: 51049088823     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/ISBI.2008.4541132     Document Type: Conference Paper

References (21)

1. Bennett, C.H., et al., Information distance. Information Theory, IEEE Transactions on, 1998. 44(4): p. 1407-1423.
2. Cilibrasi, R. and P.M.B. Vitanyi, Clustering by compression. Information Theory, IEEE Transactions on, 2005. 51(4): p. 1523-1545.
3. Li, M., et al., The similarity metric. Information Theory, IEEE Transactions on, 2004. 50(12): p. 3250-3264.
4. Gacs, P., J. Tromp, and P. Vitanyi, Algorithmic statistics. IEEE Trans. Inform. Theory, 2001. 47(6): p. 2443-2463.
5. Vereshchagin, N.K. and P.M.B. Vitanyi, Kolmogorov's structure functions and model selection. Information Theory, IEEE Transactions on, 2004. 50(12): p. 3265-3290.
6. Vitanyi, P., Meaningful information. IEEE Trans. Inform. Th., 2006. 52(10): p. 4617-4626.
7. Cover, T.M. and J.A. Thomas, Elements of Information Theory. 1991: John Wiley.
8. Al-Kofahi, O., et al., Automated semantic analysis of changes in image sequences of neurons in culture. Biomedical Engineering, IEEE Transactions on, 2006. 53(6): p. 1109-1123.
9. Al-Kofahi, O., et al., Automated cell lineage tracing: a high-throughput method to analyze cell proliferative behavior developed using mouse neural stem cells. Cell Cycle, 2006. 5(3): p. 327-335.
10. Narasimha-Iyer, H., et al., Integrated Analysis of Vascular and Non-Vascular Changes from Color Retinal Fundus Image Sequences. IEEE Transactions on Biomedical Engineering, 2007. 54(8): p. 1436-45.
11. Stauffer, C. and W.E.L. Grimson, Learning patterns of activity using real-time tracking. Pattern Analysis and Machine Intelligence, IEEE Transactions on, 2000. 22(8): p. 747-757.
12. Medioni, G., et al., Event detection and analysis from video streams. Pattern Analysis and Machine Intelligence, IEEE Transactions on, 2001. 23(8): p. 873 - 889.
13. Yianilos, P.N., Normalized Forms for Two Common Metrics 1991, The NEC Research Institute, Technical Report: Princeton, New Jersey.
14. Ng, A.Y., M. Jordan, and Y. Weiss, On Spectral Clustering: Analysis and an algorithm. Advances in Neural Information Processing Systems 14, 2002.
15. Tibshirani, R., G. Walther, and T. Hastie, Estimating the number of clusters in a dataset via the gap statistic. Journal of the Royal Statistical Society, 2001. 63: p. 411-423.
16. Chen, L. and M.T. Ozsu. Multi-scale histograms for answering queries over time series data. in Data Engineering, 2004. Proceedings. 20th International Conference on. 2004.
17. Lin, J., Keogh, E., Lonardi, S. & Chiu, B, A Symbolic Representation of Time Series, with Implications for Streaming Algorithms. Data Mining and Knowledge Discovery Journal., To appear.
18. Chew, V., Confidence, Prediction, and Tolerance Regions for the Multivariate Normal Distribution. Journal of the American Statistical Association, 1966. 61(315): p. 605-617.
19. Pudil, P., et al., Floating search methods for feature selection with nonmonotonic criterion functions. Pattern Recognition, 1994. 2: p. 279-283 vol.2.
20. Jacobson, G., B. Schnapp, and G.A. Banker, A change in the selective translocation of the Kinesin-1 motor domain marks the initial specification of the axon. Neuron 2006. 49: p. 797-804.
21. Chen, Y., et al., Automated 5-D Analysis of Cell Migration and Interaction in the Thymic Cortex from Time-Lapse Sequences of 3-D Multi-channel Multi-photon Images. In review, 2007.