Fast registration-based automatic segmentation of serial section images for high-resolution 3-D plant seed modeling

2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI

Volumn , Issue , 2008, Pages 352-355

  Bollenbeck, F ^a   Seiffert, U ^a  

^a LEIBNIZ INSTITUTE OF PLANT GENETICS AND CROP PLANT RESEARCH IPK   (Germany)

Author keywords

Biomedical microscopy; Image registration; Image segmentation; Modeling

Indexed keywords

DEFORMATION; IMAGE SEGMENTATION;

BIOMEDICAL IMAGING; BIOMEDICAL MICROSCOPY; HIGH RESOLUTIONS; IMAGE REGISTRATION; MODELING;

THREE DIMENSIONAL;

EID: 51049084200     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/ISBI.2008.4541005     Document Type: Conference Paper

References (12)

1. M. Ringwald, R.A. Baldock, J. Bard, M.H. Kaufman, J.T. Eppig, J.E. Richardson, J.H. Nadeau, and D. Davidson, "A Database for Mouse Development," Science, vol. 265, pp. 2033-2034, 1994.
2. K. Rein, M. Zöckler, M. T. Mader, C. Grubeland, and M. Heisenberg, "The Drosophila Standard Brain," Current Biology, vol. 12, no. 3, pp. 227-231(5), 2002.
3. W. Pereanu and V. Hartenstein, "Digital three-dimensional models of Drosophila development," Cur. Opin. Genet. Dev., vol. 14, pp. 382-391, 2004.
4. B.M. Dawant, S.L. Hartmann, J.P. Thirion, F. Maes, D. Vandermeulen, and P. Demaerel, "Automatic 3-d Segmentation of Internal Structures of the Head in MR Images using a Combination of Similarity and Free-Form Transformations," Medical Imaging, vol. 18, no. 10, pp. 909-916, 1999.
5. C. Baillard, P. Hellier, and C. Barillot, "Segmentation of Brain 3D MR Images using Level Sets and Dense Registration," Medical Image Analysis, vol. 5, no. 3, pp. 185-194, 2001.
6. J. Modersitzki, Numerical Methods for Image Registration, Numerical Mathematics and Scientific Computation. Oxford University Press, 2004.
7. C. Broit, Optimal Registration of Deformed Images, Ph.D. thesis, 1981.
8. B. Fischer and J. Modersitzki, "Fast Diffusion Registration," in Inverse Problems, Image Analysis, and Medical Imaging, M.Z. Nashed and O. Scherzer, Eds., Contemporary Mathematics 313. AMS, 2002.
9. B. Fischer and J. Modersitzki, "FLIRT: A Flexible Image Registration Toolbox," in Biomedical Image Registration, Philadelphia, PA, USA, 2003, LNCS, pp. 261-270, Springer, Heidelberg.
10. C. Brüss, F. Bollenbeck, F.-M. Schleif, W. Weschke, T. Villmann, and U. Seiffert, "Fuzzy Image Segmentation with Fuzzy Labelled Neural Gas," in Proc. of the 14th European Symposium on Artificial Neural Networks ESANN, 2006.
11. S. Haykin, Neural Networks: A Comprehensive Foundation, Prentice Hall PTR, 1998.
12. V. Vapnik, The Nature of Statistical Learning, Springer Verlag, New York, 1995.