Plant-like substitutions in the large-subunit carboxy terminus of Chlamydomonas Rubisco increase CO

BMC Plant Biology

Volumn 8, Issue , 2008, Pages

  Satagopan, Sriram ^a,c   Spreitzer, Robert J ^b  

^a OHIO STATE UNIVERSITY   (United States)

^b UNIVERSITY OF NEBRASKA LINCOLN   (United States)

^c DUPONT COMPANY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALGAE; CHLAMYDOMONAS; CHLAMYDOMONAS REINHARDTII; MAGNOLIOPHYTA;

CARBON DIOXIDE; HOLOENZYME; MUTANT PROTEIN; OXYGEN; PROTEIN SUBUNIT; RIBULOSEBISPHOSPHATE CARBOXYLASE;

AMINO ACID SUBSTITUTION; ANIMAL; ARTICLE; CHEMISTRY; CHLAMYDOMONAS; ENZYME STABILITY; ENZYMOLOGY; GENETICS; ISOLATION AND PURIFICATION; KINETICS; METABOLISM; MUTATION; PHENOTYPE; PLANT; PROTEIN SECONDARY STRUCTURE; STRUCTURE ACTIVITY RELATION;

AMINO ACID SUBSTITUTION; ANIMALS; CARBON DIOXIDE; CHLAMYDOMONAS; ENZYME STABILITY; HOLOENZYMES; KINETICS; MUTANT PROTEINS; MUTATION; OXYGEN; PHENOTYPE; PLANTS; PROTEIN STRUCTURE, SECONDARY; PROTEIN SUBUNITS; RIBULOSE-BISPHOSPHATE CARBOXYLASE; STRUCTURE-ACTIVITY RELATIONSHIP;

EID: 50849139535     PISSN: None     EISSN: 14712229     Source Type: Journal    
DOI: 10.1186/1471-2229-8-85     Document Type: Article

References (30)

1. Rubisco: Structure, regulatory interactions, and possibilities for a better enzyme. RJ Spreitzer ME Salvucci, Annu Rev Plant Biol 2002 53 449 475 12221984
2. Regulation of soybean net photosynthetic CO 2 fixation by the interaction of CO 2, O 2, and ribulose 1,5-diphosphate carboxylase. WA Laing WL Ogren RL Hageman, Plant Physiol 1974 54 678 685 16658951
3. Species variation in the specificity of ribulose biphosphate carboxylase/oxygenase. DB Jordan WL Ogren, Nature 1981 291 513 515
4. Genetic engineering of Rubisco. RJ Spreitzer, The Molecular Biology of Chloroplasts and Mitochondria in Chlamydomonas Dordrecht, Kluwer Academic Publishers, Rochaix JD, Goldschmidt-Clermont M, Merchant S, 1998 515 527
5. Role of the small subunit in ribulose-1,5-bisphosphate carboxylase/oxygenase. RJ Spreitzer, Arch Biochem Biophys 2003 414 141 149 12781765
6. Assessment of structural and functional divergence far from the large subunit active site of ribulose-1,5-bisphosphate carboxylase/oxygenase. YC Du SR Peddi RJ Spreitzer, J Biol Chem 2003 278 49401 49405 14506244
7. Phylogenetic engineering at an interface between large and small subunits imparts land-plant kinetic properties to algal Rubisco. RJ Spreitzer SR Peddi S Satagopan, Proc Natl Acad Sci USA 2005 102 17225 17230 16282373
8. Structural framework for catalysis and regulation in ribulose-1,5- bisphosphate carboxylase/oxygenase. I Andersson TC Taylor, Arch Biochem Biophys 2003 414 130 140 12781764
9. First crystal structure of Rubisco from a green alga, Chlamydomonas reinhardtii. TC Taylor A Backlund K Bjorhall RJ Spreitzer I Andersson, J Biol Chem 2001 276 48159 48164 11641402
10. Large structures at high resolution: The 1.6 crystal structure of spinach ribulose-1,5-bisphosphate carboxylase/oxygenase complexed with 2-carboxyarabinitol bisphosphate. I Andersson, J Mol Biol 1996 259 160 174 8648644
11. The transition between the open and closed states of Rubisco is triggered by the inter-phosphate distance of the bound bisphosphate. AP Duff TJ Andrews PM Curmi, J Mol Biol 2000 298 903 916 10801357
12. Substitutions at the Asp-473 latch residue of Chlamydomonas ribulosebisphosphate carboxylase/oxygenase cause decreases in carboxylation efficiency and CO 2 /O 2 specificity. S Satagopan RJ Spreitzer, J Biol Chem 2004 279 14240 14244 14734540
13. Site-specific mutations in a loop region of the C-terminal domain of the large subunit of ribulose bisphosphate carboxylase/oxygenase that influence substrate partitioning. S Gutteridge DF Rhoades C Herrmann, J Biol Chem 1993 268 7818 7824 8463309
14. Dependence of catalysis and CO 2 /O 2 specificity of Rubisco on the carboxy terminus of the large subunit at different temperatures. G Zhu RG Jensen HJ Bohnert GF Wildner J Schlitter, Photosynth Res 1998 57 71 79
15. Photosynthesis-deficient mutants of Chlamydomonas reinhardtii with associated light-sensitive phenotypes. RJ Spreitzer L Mets, Plant Physiol 1981 67 565 569 16661715
16. The role of structural intersubunit microheterogeneity in the regulation of the activity in hysteresis of ribulose 1,5-bisphosphate carboxylase/ oxygenase. K Uemura N Shibata M Anwaruzzaman M Fujiwara T Higuchi H Kobayashi Y Kai A Yokota, J Biochem 2000 128 591 599 11011141
17. The X-ray structure of Synechococcus ribulose-bisphosphate carboxylase/oxygenase-activated quaternary complex at 2.2- resolution. J Newman S Gutteridge, J Biol Chem 1993 268 25876 25886 8245022
18. Bioinformatic tools uncover the C-terminal strand of Rubisco's large subunit as hot-spot for specificity-enhancing mutations. C Burisch GF Wildner J Schlitter, FEBS Lett 2007 581 741 748 17274986
19. Chimeric small subunits influence catalysis without causing global conformational changes in the crystal structure of ribulose-1,5-bisphosphate carboxylase/oxygenase. S Karkehabadi SR Peddi M Anwaruzzaman TC Taylor A Cederlund T Genkov I Andersson RJ Spreitzer, Biochemistry 2005 44 9851 9861 16026157
20. Enhancing photosynthesis by improving Rubisco carboxylase activity and specificity, and Rubisco activase thermostability through DNA shuffling. G Zhu I Kurek T True X Zhang M Majundar L Liu M Lassner, Photosynthesis: Fundamental Aspects to Global Perspectives Lawrence, KS, Allen Press, Van der Est A, Bruce D, 2005 841 843
21. Suppressor mutations in the chloroplast-encoded large subunit improve the thermal stability of wild-type ribulose-1,5-bisphosphate carboxylase/oxygenase. YC Du RJ Spreitzer, J Biol Chem 2000 275 19844 19847 10779514
22. Development of the particle inflow gun for DNA delivery to plant cells. JJ Finer P Vain MW Jones MD McMullen, Plant Cell Rep 1992 11 323 328
23. Directed mutagenesis of chloroplast ribulosebisphosphate carboxylase/oxygenase: Substitutions at large subunit asparagine 123 and serine 379 decrease CO 2 /O 2 specificity. G Zhu RJ Spreitzer, J Biol Chem 1994 269 3952 3956 8307949
24. Electrophoretic analysis of chloroplast proteins. NH Chua, Methods Enzymol 1980 69 434 446
25. Complementing substitutions within loop regions 2 and 3 of the /-barrel active site influence the CO 2 /O 2 specificity of chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase. G Thow G Zhu RJ Spreitzer, Biochemistry 1994 33 5109 5114 8172885
26. Heteroplasmic suppression of an amber mutation in the Chlamydomonas chloroplast gene that encodes the large subunit of ribulosebisphosphate carboxylase/oxygenase. RJ Spreitzer CJ Chastain, Curr Genet 1987 11 611 616
27. Reduced CO 2 /O 2 specificity of ribulose-bisphosphate carboxylase/oxygenase in a temperature-sensitive chloroplast mutant of Chlamydomonas. Z Chen CJ Chastain SR Al-Abed R Chollet RJ Spreitzer, Proc Natl Acad Sci USA 1988 85 4696 4699 3133659
28. A sensitive assay procedure for simultaneous determination of ribulose-1,5-bisphosphate carboxylase and oxygenase activities. DB Jordan WL Ogren, Plant Physiol 1981 67 237 245 16661654
29. Biochemical and genetic analysis of an RuBP carboxylase/oxygenase- deficient mutant and revertants of Chlamydomonas reinhardtii. RJ Spreitzer DB Jordan WL Ogren, FEBS Lett 1982 148 117 121
30. Thermal instability of ribulose-1,5-bisphosphate carboxylase/oxygenase from a temperature-conditional chloroplast mutant of Chlamydomonas reinhardtii. Z Chen S Hong RJ Spreitzer, Plant Physiol 1993 101 1189 1194 12231772