Application of GGE biplot analysis to evaluate genotype (G), environment (E) and GxE interaction on Pinus radiata: A case study

New Zealand Journal of Forestry Science

Volumn 38, Issue 1, 2008, Pages 132-142

  Ding, M ^a   Tier, B ^a   Yan, W ^b   Wu, Harry X ^c   Powell, M B ^d   McRae, T A ^d  

^a UNIVERSITY OF NEW ENGLAND   (Australia)

^b OTTAWA RESEARCH AND DEVELOPMENT CENTRE   (Canada)

^c CSIRO   (Australia)

^d Southern Tree Breeding Association   (Australia)

Author keywords

GGE biplot; GxE interaction; Pinus radiata; Principal component analysis

Indexed keywords

CHROMOSOMES;

GENETIC CORRELATION; GGE BIPLOT; GXE INTERACTION; MULTI-ENVIRONMENTS; OVERLAPPING CLUSTERS; PINUS RADIATA; TEST ENVIRONMENT; VISUAL EXAMINATION;

PRINCIPAL COMPONENT ANALYSIS;

ADAPTATION; CONFERENCE PROCEEDING; CONIFEROUS TREE; GENETIC ANALYSIS; GENOTYPE; PRINCIPAL COMPONENT ANALYSIS; TESTING METHOD;

PINUS RADIATA;

EID: 50849089326     PISSN: 00480134     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Conference Paper

References (27)

1. ADES, P.K.; GARNIER-GÉRÉ, P.-H. 1997: Making sense of provenance x environment interaction in Pinus radiata. Pp. 113-119 in Burdon, R.D.; Moore, J.M. (Ed.) "IUFRO '97 Genetics of Radiata Pine". Proceedings of NZ FRI-IUFRO Conference 1-4 December and Workshop 5 December, Rotorua, New Zealand. FRI Bulletin No.203.
2. BURDON, R.D. 1977: Genetic correlation as a concept for studying genotype-environment interaction in forest tree breeding. Silvae Genetica 26(5-6): 168-175.
3. BUTRÓN, A.; VELASCO, P.; ORDÁS, A.; MALVAR, R.A. 2004: Yield evaluation of maize cultivars across environments with different levels of pink stem borer infestation. Crop Science 44: 741-747.
4. COOPER, M.; HAMMER, G.L. 1996: "Plant Adaptation and Crop Improvement". CAB International, Wallingford.
5. CROSSA, J.; CORNELIUS, P.L.; YAN, W. 2002: Biplots of linear-bilinear models for studying crossover genotype x environment interaction. Crop Science 42: 136-144.
6. DEHGHANI, H.A.; EBADI; YOUSEFI, A. 2006: Biplot analysis of genotype by environment interaction for barley yield in Iran. Agronomy Journal 98: 388-393.
7. DELACY, I.H.; BASFORD, K.E.; COOPER, M.; BULL, J.K. 1996: Analysis of multi-environment trials - an historical perspective. In Cooper, M.; Hammer, G.L. (Ed.) "Plant Adaptation and Crop Improvement". CAB Iinternational.
8. DIAS, C.T. DOS S.; KRZANOWSKIB, W.J. 2003: Model selection and cross validation in additive main effect and multiplicative interaction models. Crop Science 43: 865-873.
9. EBERHART, S.A.; RUSSEL, W.A. 1966: Stability parameters for comparing varieties. Crop Science 6: 36-40.
10. FINLAY, K.W.; WILKINSON, G.N. 1963: The analysis of adaptation in a plant breeding programme. Australian Journal of Agricultural Research 14: 742-754.
11. GABRIEL, K.R. 1971: The biplot graphic of matrices with application to principal component analysis. Biometrics 58: 453-467.
12. GAUCH, H.G. 1992: "Statistical Analysis of Regional Yield Trials: AMMI Analysis of Factorial Designs". Elsevier, Amsterdam, Netherlands.
13. JOHNSON, G.R.; BURDON, R.D. 1990: Family-site interaction in Pinus radiata: implications for progeny testing strategy and regionalized breeding in New Zealand. Silvae Genetica 39: 55-62.
14. KAYA, Y.M.; AKCURA; TANER, S. 2006: GGE-biplot analysis of multi-environment yield trials in bread wheat. Turkish Journal of Agriculture & Forestry 30: 325-337.
15. KROONENBERG, P.M. 1995: "Introduction to Biplots for GxE Tables". University of Queensland, Brisbane.
16. MA, B.L.; YAN, W.; DWYER, L.M.; FRÉGEAU-REID, J.; VOLDENG, H.D.; DION, Y.; NASS, H. 2004: Graphic analysis of genotype, environment, nitrogen fertilizer, and their interaction on spring wheat yield. Agronomy Journal 96: 169-180.
17. PERKINS, J.M.; JINKS, J.L. 1968: Environmental and genotype-environmental interactions and physical measures of the environment. Heredity 25: 29-40.
18. SAS INSTITUTE INC. 1999: "SAS Language and Procedures". Usage 2, Version 6.
19. WU, H.X.; MATHESON, A.C. 2005: Genotype by environment interactions in an Australia-wide radiata pine diallel mating experiment: implications for regionalized breeding. Forest Science 51: 29-40.
20. YAMADA, Y. 1962: Genotype x environment interaction and genetic correlation of the same trait under different environments. Japanese Journal of Genetics 37: 498-509.
21. YAN, W. 2002: Singular-value partitioning in biplot analysis of multienvironment trial data. Agronomy Journal 94: 990-996.
22. YAN, W.; HUNT, L.A. 2001: Genetic and environmental causes of genotype by environment interaction for winter wheat yield in Ontario. Crop Science 41: 19-25.
23. YAN, W.; MA, B.L. 2006: "Model Diagnosis and GGE Biplot Analysis". Eastern Cereal and Oilseed Research Centre, Agriculture and Agri-food Canada. 39 p.
24. YAN, W.; RAJCAN, I.R. 2002: Biplot analysis of test sites and trait relations of soybean in Ontario. Canadian Journal of Plant Science 42: 11-20.
25. YAN, W.; TINKER, N.A. 2005: An integrated biplot analysis system for displaying, interpreting, and exploring genotype x environment interaction. Crop Science 45: 1004-1016.
26. YAN, W.; HUNT, L.A.; SHENG, Q.; SZLAVNICSA, Z. 2000: Cultivar evaluation and mega-environment investigation based on the GGE biplot. Crop Science 40: 597-605.
27. ZOBEL, R.W.; WRIGHT, M.J.; GAUCH, H.G. 1988: Statistical analysis of a yield trial. Agronomy Journal 80: 388-393.