Identification of the genetic determinants of Salmonella enterica serotype Typhimurium that may regulate the expression of the type 1 fimbriae in response to solid agar and static broth culture conditions

BMC Microbiology

Volumn 8, Issue , 2008, Pages

  Chuang, Yin Ching ^a   Wang, Ke Chuan ^b   Chen, Yi Tseng ^b   Yang, Chia Huei ^b   Men, Shang Chin ^b   Fan, Chia Chun ^b   Chang, Li Huan ^b   Yeh, Kuang Sheng ^b,c  

^a CHI MEI MEDICAL CENTER   (Taiwan)

^b TAIPEI MEDICAL UNIVERSITY   (Taiwan)

^c TAIPEI MEDICAL UNIVERSITY   (Taiwan)

Author keywords

[No Author keywords available]

Indexed keywords

AGAR; OLIGONUCLEOTIDE; BACTERIAL ANTIGEN; BACTERIAL PROTEIN; FIMBRIA PROTEIN; FLAVINE MONONUCLEOTIDE REDUCTASE; SEF21 PROTEIN, SALMONELLA ENTERITIDIS;

AGGLUTINATION TEST; ARTICLE; BACTERIAL GENE; BACTERIAL STRAIN; BACTERIUM CULTURE; BACTERIUM MUTANT; CONTROLLED STUDY; FIMBRIA; GENE FUNCTION; GENE INSERTION; GENE SEQUENCE; GENETIC COMPLEMENTATION; GENETIC SCREENING; MOLECULAR CLONING; MUTAGENESIS; NONHUMAN; OPEN READING FRAME; PHENOTYPE; PLASMID; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SALMONELLA TYPHIMURIUM; TRANSPOSON; YEAST; CHEMISTRY; CULTURE MEDIUM; GENE EXPRESSION; GENE EXPRESSION REGULATION; GENE LIBRARY; GENETIC TRANSCRIPTION; GENETICS; METABOLISM; ULTRASTRUCTURE;

SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM;

ANTIGENS, BACTERIAL; BACTERIAL PROTEINS; CULTURE MEDIA; DNA TRANSPOSABLE ELEMENTS; FIMBRIAE PROTEINS; FIMBRIAE, BACTERIAL; FMN REDUCTASE; GENE EXPRESSION; GENE LIBRARY; GENETIC COMPLEMENTATION TEST; MUTAGENESIS, INSERTIONAL; PHENOTYPE; SALMONELLA TYPHIMURIUM; TRANSCRIPTION, GENETIC;

EID: 50649109390     PISSN: 14712180     EISSN: 14712180     Source Type: Journal    
DOI: 10.1186/1471-2180-8-126     Document Type: Article

References (61)

1. Epidemiology of food-borne disease: a worldwide review. EC Todd, World Health Stat Q 1997 50 30 50 9282385
2. Proteinaceous bacterial adhesins and their receptors. GW Jones RE Isaacson, Crit Rev Microbiol 1983 10 229 260 10.3109/10408418209113564 6138214
3. Non-flagellar filamentous appendages ("fimbriae") and haemagglutinating activity in Bacterium coli. JP Duguid IW Smith G Dempster PN Edmunds, J Pathol Bacteriol 1995 70 335 348 10.1002/path.1700700210
4. Fimbriae and adhesive properties in Salmonella. JP Duguid ES Anderson I Campbell, J Pathol Bacteriol 1966 92 107 138 10.1002/path.1700920113 5334095
5. The structure, function, synthesis and genetic control of bacterial pili and a molecular model of DNA and RNA transport in gram negative bacteria. CC Brinton Jr., Trans N Y Acad Sci 1965 27 1003 1054 5318403
6. Fimbriae and adhesive properties in dysentery bacilli. JP Duguid RR Gillies, J Pathol Bacteriol 1957 74 397 411 10.1002/path.1700740218
7. Type 1 fimbriae of Salmonella enterica serovar Typhimurium bind to enterocytes and contribute to colonization of swine in vivo. C Althouse S Patterson P Fedorka-Cray RE Isaacson, Infect Immun 2003 71 6446 6452 14573666 10.1128/IAI.71.11.6446-6452.2003
8. Molecular basis for the enterocyte tropism exhibited by Salmonella typhimurium type 1 fimbriae. K Thankavel AH Shah MS Cohen T Ikeda RG Lorenz R Curtiss III SN Abraham, J Biol Chem 1999 274 5797 5809 10.1074/jbc.274.9.5797 10026202
9. Multiple fimbrial adhesins are required for full virulence of Salmonella typhimurium in mice. AWM van der Velden AJ Bäumler RM Tsolis F Heffron, Infect Immun 1998 66 2803 2808 9596751
10. Salmonella fimbriae. S Clegg DL Swenson, Fimbriae: adhesion, genetics, biogenesis, and vaccines Boca Raton, FL, CRC Press, Klemm P, 1994 105 114
11. Fimbriation, pellicle formation and the amount of growth of salmonellas in broth. DC Old I. Corneil, L. F. Gibson, A. D. Thomson, and J. P. Duguid, J Gen Microbiol 1968 51 1 16 4871214
12. Selective outgrowth of fimbriate bacteria in static liquid medium. DC Old JP Duguid, J Bacteriol 1970 103 447 456 4914569
13. FimZ binds the Salmonella typhimurium fimA promoter region and may regulate its own expression with FimY. KS Yeh JK Tinker S Clegg, Microbiol Immunol 2002 46 1 10 11911183
14. Construction and characterization of a fimZ mutant of Salmonella typhimurium. KS Yeh LS Hancox S Clegg, J Bacteriol 1995 177 6861 6865 7592479
15. FimW is a negative regulator affecting type 1 fimbrial expression in Salmonella enterica serovar Typhimurium. JK Tinker LS Hancox S Clegg, J Bacteriol 2001 183 435 442 11133935 10.1128/JB.183.2.435-442.2001
16. Control of FimY translation and type 1 fimbrial production by the arginine tRNA encoded by fimU in Salmonella enterica serovar Typhimurium. JK Tinker S Clegg, Mol Microbiol 2001 40 757 768 10.1046/j.1365-2958.2001.02430.x 11359580
17. The gene fimU affects expression of Salmonella typhimurium type 1 fimbriae and is related to the Escherichia coli tRNA gene argU. DL Swenson KJ Kim EW Six S Clegg, Mol Gen Genet 1994 244 216 218 10.1007/BF00283525 7914347
18. Identification of ancillary fim genes affecting fimA expression in Salmonella typhimurium. DL Swenson S Clegg, J Bacteriol 1992 174 7697 7704 1360005
19. Characterization of FimY as a coactivator of type 1 fimbrial expression in Salmonella enterica serovar Typhimurium. JK Tinker S Clegg, Infect Immun 2000 68 3305 3313 10816478 10.1128/IAI.68.6.3305-3313.2000
20. The leucine-responsive regulatory protein, Lrp, activates transcription of the fim operon in Salmonella enterica serovar Typhimurium via the fimZ regulatory gene. KA McFarland S Lucchin JCD Hinton CJ Dorman, J Bacteriol 2008 190 602 612 17981960 10.1128/JB.01388-07
21. Differential binding to and biofilm formation on, HEp-2 cells by Salmonella enterica serovar Typhimurium is dependent upon allelic variation in the fimH gene of the fim gene cluster. JD Boddicker NA Ledeboer J Jagnow BD Jones S Clegg, Mol Microbiol 2002 45 1255 1265 10.1046/j.1365-2958.2002.03121.x 12207694
22. Identification and sequence analysis of lpfABCDE, a putative fimbrial operon of Salmonella typhimurium. AJ Baumler F Heffron, J Bacteriol 1995 177 2087 2097 7721701
23. Nucleotide sequence of a 13.9 kb segment of the 90 kb virulence plasmid of Salmonella typhimurium: the presence of fimbrial biosynthetic genes. MJ Friedrich NE Kinsey J Vila RJ Kadner, Mol Microbiol 1993 8 543 558 10.1111/j.1365-2958.1993.tb01599.x 8100983
24. The chaperone/usher pathway: a major terminal branch of the general secretory pathway. DG Thanassi ET Saulino SJ Hultgren, Curr Opin Microbiol 1998 1 223 231 10.1016/S1369-5274(98)80015-5 10066482
25. Characterization of a novel, low-molecular weight DNA-binding protein from Escherichia coli. J Rouviere-Yaniv F Gros, Proc Natl Acad Sci USA 1975 72 3428 3432 1103148 10.1073/pnas.72.9.3428
26. Cloning, nucleotide sequence, and characterization of mtr, the structural gene for a tryptophan-specific permease of Escherichia coli K-12. VM Heatwole RL Somerville, J Bacteriol 1991 173 108 115 1987112
27. A functional superfamily of sodium/solute symporters. J Reizer A Reizer MHJ Saier, Biochim Biophys Acta 1994 1197 133 166 8031825
28. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. M McClelland KE Sanderson J Spieth SW Clifton P Latreille L Courtney S Porwollik J Ali M Dante F Du S Hou D Layman S Leonard C Nguyen K Scott A Holmes N Grewal E Mulvaney E Ryan H Sun L Florea W Miller T Stoneking M Nhan R Waterston RK Wilson, Nature (London) 2001 413 852 856 10.1038/35101614
29. Structure and probable genetic location of a "ribosome modulation factor" associated with 100S ribosomes in stationary-phase Escherichia coli cells. A Wada Y Yamazaki N Fujita A Ishihama, Proc Natl Acad Sci USA 1990 87 2657 2661 2181444 10.1073/pnas.87.7.2657
30. Unsuspected prophage-like elements in Salmonella typhimurium. N Figueroa-Bossi E Coissac P Netter L Bossi, Mol Microbiol 1997 25 161 173 10.1046/j.1365-2958.1997.4451807.x 11902718
31. A conserved amino acid sequence directing intracellular type III secretion by Salmonella typhimurium. EA Miao SI Miller, Proc Natl Acad Sci USA 2000 97 7539 7544 10861017 10.1073/pnas.97.13.7539
32. Macrophage-dependent induction of the Salmonella pathogenicity island 2 type III secretion system and its role in intracellular survival. DM Cirillo RH Valdivia DM Monack S Falkow, Mol Microbiol 1998 30 175 188 10.1046/j.1365-2958. 1998.01048.x 9786194
33. Interaction of the sigma factor and the NusA gene protein of E. coli with RNA polymerase in the initiation-termination cycle of transcription. J Greenblatt J Li, Cell 1981 24 421 428 10.1016/0092-8674(81)90332-9 6263495
34. Regulation and function of phase variation in Escherichia coli. I Blomfield M van der Woude, Bacterial Adhesion to Host Tissues Mechanisms and Consequences Cambridge, United Kingdom, Cambridge University Press, Wilson W, 2002 89 113
35. An invertible element of DNA controls phase variation of type 1 fimbriae of Escherichia coli. JM Abraham CS Fretiag JR Clements BI Eisenstein, Proc Natl Acad Sci USA 1985 82 5724 5727 2863818 10.1073/pnas.82.17.5724
36. Rapid site-specific DNA inversion in Escherichia coli mutants lacking the histone-like protein H-NS. TH Kawula PE Orndorf, J Bacteriol 1991 173 4116 4123 1648076
37. Integration host factor stimulates both FimB- and FimE-mediated site-specific DNA inversion that controls phase variation of type 1 fimbriae expression in Escherichia coli. IC Blomfield DH Kulasekara BI Eisenstein, Mol Microbiol 1997 23 705 717 10.1046/j.1365-2958.1997.2241615.x 9157242
38. The leucine-responsive regulatory protein binds to the fim switch to control phase variation of type 1 fimbrial expression in Escherichia coli. DL Gally TJ Rucker IC Blomfield, J Bacteriol 1994 176 5665 5672 7916011
39. Escherichia coli K-12: a cooperatively developed annotation snapshot-2005. M Riley T Abe MB Arnaud MK Berlyn FR Blattner RR Chaudhuri JD Glasner T Horiuchi IM Keseler T HKosuge H Mori NT Perna G Plunkett III KE Rudd MH Serres GH Thomas NR Thomason D Wishart BL Wanner, Nucleic Acids Res 2006 34 1 9 16397293 10.1093/nar/gkj405
40. Salmonella typhimurium fimbrial phase variation and FimA expression. S Clegg LS Hancox KS Yeh, J Bacteriol 1996 178 542 545 8550478
41. Salmonella enterica serovar Typhi possesses a unique repertoire of fimbrial gene sequences. S Townsend NE Kramer R Edwards S Baker N Hamlin M Simmonds K Stevens S Maloy J Parkhill G Ougan AJ Baumler, Infect Immun 2001 69 2894 2901 11292704 10.1128/IAI.69.5.2894-2901.2001
42. DNA methylation-dependent regulation of Pef expression in Salmonella typhimurium. B Nichoison D Low, Mol Microbiol 2000 35 728 742 10.1046/j.1365-2958.2000.01743.x 10692151
43. Reciprocal exchange of minor components of type 1 and F1C fimbriae results in hybrid organelles with changed receptor specificities. P Klemm G Christiansen B Kreft R Marre H Bergmans, J Bacteriol 1994 176 2227 2234 7908902
44. Demonstration of regulatory cross-talk between P fimbriae and type 1 fimbriae in uropathogenic Escherichia coli. NJ Holden M Totsika E Mahler J Roe K Catherwood K Lindner U Dobrindt DL Gally, Microbiol-SGM 2006 152 1143 1153 10.1099/mic.0.28677-0
45. SIMPLE approach for isolating mutants expressing fimbriae. SP Nuccio D Chessa EH Weening M Raffatellu S Clegg AJ Baumler, Appl Environ Microbiol 2007 73 4455 4462 17526787 10.1128/AEM.00148-07
46. Selective silencing of foreign DNA with low GC content by the H-NS protein in Salmonella enterica Sv. Typhimurium. WW Navarre S Porwollik Y Wang M McClelland H Rosen SJ Libby FC Fang, Science 2006 313 236 238 10.1126/science.1128794 16763111
47. Involvement of RNase G in in vivo mRNA metabolism in Escherichia coli. G Umitsuki M Wachi A Takada T Hikichi K Nagai, Genes Cells 2001 6 403 410 10.1046/j.1365-2443.2001.00430.x 11380618
48. Demonstration of different mutational sites controlling rhamnose fermentation in FIRN and non-FIRN rha-strains of Salmonella typhimurium: an essay in bacterial archaeology. A Morgenroth JP Duguid, Genet Res 1968 11 151 169 4869632
49. Salmonella enterica virulence genes are required for bacterial attachment to plant tissue. JD Barak L Gorski P Naraghi-Arani AO Charkowski, Appl Environ Microbiol 2005 71 5685 5691 16204476 10.1128/AEM.71.10.5685-5691.2005
50. Type III restriction endonucleases translocate DNA in a reaction driven by recognition site-specific ATP hydrolysis. A Meisel P Mackeldanz TA Bickle DH Kruger C Schroeder, EMBO J 1995 14 2958 2966 7796821
51. Pausing by bacterial RNA polymerase is mediated by mechanistically distinct classes of signals. I Artsimovitch R Landick, Proc Natl Acad Sci USA 2000 97 7090 7095 10860976 10.1073/pnas.97.13.7090
52. Reduced Rho-dependent termination permits NusA independent growth of E. coli. CH Zheng DI Friedman, Proc Natl Acad Sci USA 1994 91 7543 7547 8052617 10.1073/pnas.91.16.7543
53. Pleiotropic effects induced by modification deficiency next to the anticodon of tRNA from Salmonella typhimurium LT2. JU Ericson GR Bjork, J Bacteriol 1986 166 1013 1021 2423501
54. Identification of Escherichia coli ubiB, a gene required for the first monooxygenase step in ubiquinone biosynthesis. WW Poon DE Davis HT Ha T Jonassen PN Rather CF Clarke, J Bacteriol 2000 182 5139 5146 10960098 10.1128/JB.182.18.5139-5146.2000
55. Novel families of putative protein kinases in bacteria and archaca: evolution of the "eukaryotic" protein kinase superfamily. CJ Leonard L Aravind EV Koonin, Genome Res 1998 8 1038 1047 9799791
56. Role of nonhost environments in the lifestyles of Salmonella and Escherichia coli. MD Winfield EA Groisman, Appl Environ Microbiol 2003 69 3687 3694 12839733 10.1128/AEM.69.7.3687-3694.2003
57. Salmonella typhimurium LT2 strains which are r- m+ for all three chromosomally located systems of DNA restriction and modification. LR Bullas JI Ryu, J Bacteriol 1983 156 471 474 6352690
58. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. B Yanish-Perron J Vieira J Messing, Gene 1985 33 103 119 10.1016/0378-1119(85)90120-9 2985470
59. Studies of human salmonellosis in relation to infection in animals. NS Galbraith, Vet Res 1961 73 1296 1303
60. Rapid isolation of promoter sequences by TAIL-PCR: the 5'-flanking regions of pal and pgi genes from yams (Dioscorea). R Terauchi G Kahl, Mol Gen Genet 2000 263 554 560 10.1007/s004380051201 10821191
61. Thermal asymmetric interlaced PCR: automatable amplification and sequencing of insert end fragments from P1 and YAC clones for chromosome walking. YG Liu RF Whittier, Genomics 1995 25 674 681 10.1016/0888-7543(95) 80010-J 7759102