메뉴 건너뛰기




Volumn 52, Issue 2, 2008, Pages 115-126

3D automatic quantification applied to optically sectioned images to improve microscopy analysis

Author keywords

3D quantification; Deconvolution; Fluorescence; Information extraction

Indexed keywords

ALGORITHM; ANIMAL CELL; ARTICLE; CELL STRUCTURE; CONTROLLED STUDY; FLUORESCENCE MICROSCOPY; LIVER CELL; MICROSCOPY; NONHUMAN; OPTICS; SPHEROID CELL; THREE DIMENSIONAL IMAGING; TISSUE SECTION; ANIMAL; APOPTOSIS; CELL CULTURE; CYTOLOGY; INSTRUMENTATION; METHODOLOGY; NECROSIS; NICK END LABELING; SWINE; ULTRASTRUCTURE;

EID: 50349099089     PISSN: 1121760X     EISSN: None     Source Type: Journal    
DOI: 10.4081/1201     Document Type: Article
Times cited : (5)

References (28)
  • 3
    • 0021119618 scopus 로고
    • Optical sectioning microscopy: Cellular archiquetecture in three dimensions
    • Agard DA. Optical sectioning microscopy: cellular archiquetecture in three dimensions. Ann Rev Biophys Bioeng, 1984; 13:191-219.
    • (1984) Ann Rev Biophys Bioeng , vol.13 , pp. 191-219
    • Agard, D.A.1
  • 4
    • 0022394542 scopus 로고
    • Fluorescence digital imaging microscopy in cell biology
    • Arndt-Jovin DJ, Robert-Nicoud M, Kaufman SJ, Jovin T M. Fluorescen digital imaging microscopy in cell biology. Science 1985;4723:247-256 (Pubitemid 16225655)
    • (1985) Science , vol.230 , Issue.4723 , pp. 247-256
    • Arndt-Jovin, D.J.1    Robert-Nicoud, M.2    Kaufman, S.J.3    Jovin, T.M.4
  • 6
    • 10444221283 scopus 로고    scopus 로고
    • Model-based method in analysis of biomedical images
    • Baldock R and Graham J Eds. Oxford University Press. Chapter 7
    • Cootes T. Model-based method in analysis of biomedical images. In: Image Processing and Analysis. Baldock R and Graham J Eds. Oxford University Press. Chapter 7, 2000, pp. 223-247
    • (2000) Image Processing and Analysis , pp. 223-247
    • Cootes, T.1
  • 7
    • 0000675469 scopus 로고
    • The collection, processing, display of digital three-dimensional images of biological specimens
    • Pawley J B Ed. Plenum Press, New York, Chapter 13
    • Chen H, Swedlow JR, Grote M, Sedat J W, Agard D A. The collection, processing, display of digital three-dimensional images of biological specimens. In: Handbook of Biological Confocal Microscopy, Pawley J B Ed. Plenum Press, New York, 1995, Chapter 13,197-209.
    • (1995) Handbook of Biological Confocal Microscopy , pp. 197-209
    • Chen, H.1    Swedlow, J.R.2    Grote, M.3    Sedat, J.W.4    Agard, D.A.5
  • 11
    • 0031689215 scopus 로고    scopus 로고
    • Intracellular fluorescent probe concentrations by confocal microscopy
    • Fink C, Morgan F, Loew LM. Intracellular fluorescent probe concentrations by confocal microscopy. Biophys J 1998;75:1648-1658 (Pubitemid 28455161)
    • (1998) Biophysical Journal , vol.75 , Issue.4 , pp. 1648-1658
    • Fink, C.1    Morgan, F.2    Loew, L.M.3
  • 12
    • 18244366662 scopus 로고    scopus 로고
    • Tissue engineering - Current challenges and expanding opportunities
    • DOI 10.1126/science.1069210
    • Griffith LG, Naughton G. Tissue engineering - Current challenges and expanding opportunities. Science 2002; 295:1009-1014 (Pubitemid 34132215)
    • (2002) Science , vol.295 , Issue.5557
    • Griffith, L.G.1    Naughton, G.2
  • 13
    • 0035662001 scopus 로고    scopus 로고
    • Effects of medium composition on the morphology and function of rat hepatocytes cultured as spheroids and monolayers
    • Hamilton GA, Westmoreland C, George E. Effects of medium composition on the morphology and function of rat hepatocytes cultured as spheroids en monolayers. In Vitro Cell Dev Biol Animal 2001; 37:656-667 (Pubitemid 34001116)
    • (2001) In Vitro Cellular and Developmental Biology - Animal , vol.37 , Issue.10 , pp. 656-667
    • Hamilton, G.A.1    Westmoreland, C.2    George, E.3
  • 14
    • 0036392062 scopus 로고    scopus 로고
    • Cultivation of fetal liver cells in a three dimensional poly L lactic acid scaffold in the presence of oncostatin M
    • Jiang J, Kojima N, Kinoshita T, Miyajima A, Yan W, Sakai Y. Cultivation of fetal liver cells in a three dimensional poly L lactic acid scaffold in the presence of oncostatin M. Cell Transplant 2002; 11:403-406
    • (2002) Cell Transplant , vol.11 , pp. 403-406
    • Jiang, J.1    Kojima, N.2    Kinoshita, T.3    Miyajima, A.4    Yan, W.5    Sakai, Y.6
  • 16
    • 0035871053 scopus 로고    scopus 로고
    • Theoretical versus experimental resolution in optical microscopy
    • DOI 10.1002/jemt.1080
    • Kozubek M. Theoretical versus experimental resolution in optical microscopy. Microsc Res Tech 2001; 53:157-166 (Pubitemid 32378047)
    • (2001) Microscopy Research and Technique , vol.53 , Issue.2 , pp. 157-166
    • Kozubek, M.1
  • 17
    • 0038574486 scopus 로고    scopus 로고
    • Ammonium detoxification performed by porcine hepatocyte spheroids in a bioartificial liver for pediatric use: Preliminary report
    • DOI 10.1046/j.1525-1594.2003.07098.x
    • Lorenti AS, Barbich M, de Santibanes M, Ielpi M, Vazquez JC, Sorroche P, Argibay P. Ammonium detoxification performed by porcine hepatocyte spheroids in a bioartificial liver for pediatric use: preliminary report. Artif Organs 2003; 27:665-670 (Pubitemid 36829725)
    • (2003) Artificial Organs , vol.27 , Issue.7 , pp. 665-670
    • Lorenti, A.1    Barbich, M.2    De Santibanes, M.3    Ielpi, M.4    Vazquez, J.C.5    Sorroche, P.6    Argibay, P.7
  • 19
    • 0026810442 scopus 로고
    • Regularized linear method for reconstruction of three-dimensional microscopic objects from optical sections
    • Preza C, Miller MI, Thomas LJ, McNally JG. Regularized linear method for reconstruction of three-dimensional microscopic objects from optical sections. J Opt Soc Am A1992;9:219-228
    • (1992) J Opt Soc Am A , vol.9 , pp. 219-228
    • Preza, C.1    Miller, M.I.2    Thomas, L.J.3    McNally, J.G.4
  • 20
    • 0032721185 scopus 로고    scopus 로고
    • A new bioartificial liver using porcine hepatocyte spheroids in high-cell-density suspension perfusion culture: In vitro performance in synthesized culture medium and in 100% human plasma
    • Sakai Y, Naruse K, Nagashima I, Muto T, Suzuki M. A new bioartificial liver using porcine hepatocyte spheroids in high cell density suspension perfusion culture: in vitro performance in synthesized culture medium and in 100% human plasma. Cell Transplant 1999;8:531-541 (Pubitemid 129782573)
    • (1999) Cell Transplantation , vol.8 , Issue.5 , pp. 531-541
    • Sakai, Y.1    Naruse, K.2    Nagashima, I.3    Suzuki, M.4
  • 21
    • 0034866206 scopus 로고    scopus 로고
    • In vitro organization of biohybrid rat liver tissue incorporating growth factor and hormone releasing biodegradable polymer microcapsules
    • Sakai Y, Furukawa K, Ushida T, Tateishi T, Suzuki M. In vitro organization of biohybrid rat liver tissue incorporating growth factor and hormone releasing biodegradable polymer microcapsules. Cell Transplant 2001; 10:479-483
    • (2001) Cell Transplant , vol.10 , pp. 479-483
    • Sakai, Y.1    Furukawa, K.2    Ushida, T.3    Tateishi, T.4    Suzuki, M.5
  • 22
    • 85032750912 scopus 로고    scopus 로고
    • Deconvolution methods for 3-D fluorescence microscopy images Signal Processing Magazine
    • Sarder P, Nehorai A. Deconvolution methods for 3-D fluorescence microscopy images Signal Processing Magazine, IEEE, 2006;23:32-45.
    • (2006) IEEE , vol.23 , pp. 32-45
    • Sarder, P.1    Nehorai, A.2
  • 24
    • 18244406583 scopus 로고    scopus 로고
    • Bioartificial liver - State of the art
    • Strain A. J, Neuberger James M. Bioartificial liver - State of the art. Science 2002; 295:1005-1014
    • (2002) Science , vol.295 , pp. 1005-1014
    • Strain, A.J.1    Neuberger James, M.2
  • 25
    • 0030743676 scopus 로고    scopus 로고
    • External marker-based automatic congruencing: A new method of 3D reconstruction from serial sections
    • DOI 10.1002/(SICI)1097-0185(199708)248:4<583::AID-AR10>3.0.CO;2-L
    • Streicher J, Weninger W J, Müller G B. External Marker-Based automatic congruencing a new method of 3D reconstruction from serial sections. Anat Rec 1997; 248:583-602. (Pubitemid 27342703)
    • (1997) Anatomical Record , vol.248 , Issue.4 , pp. 583-602
    • Streicher, J.1    Weninger, W.J.2    Muller, G.B.3
  • 26
    • 0002757927 scopus 로고    scopus 로고
    • Deconvolution in Optical Microscopy
    • Jansson P A, Ed. Academic Press, Chapter 9
    • Swedlow J R et al. Deconvolution in Optical Microscopy. In: Deconvolution of Images and Spectra. Jansson P A, Ed. Academic Press, 1997, Chapter 9, pp. 284-309.
    • (1997) Deconvolution of Images and Spectra , pp. 284-309
    • Swedlow, J.R.1
  • 27
    • 17744382574 scopus 로고    scopus 로고
    • Optimization of hepatocyte spheroid formation for hepatic tissue engineering on three-dimensional biodegradable polymer within a flow bioreactor prior to implantation
    • DOI 10.1159/000047858
    • Török É, Pollok J M, Ma P X, Kaufmann P M, Dandri M, Petersen J, et al. Optimization of hepatocyte spheroids formation for hepatic tissue engineering on 3D biodegradable polymer within a flow bioreactor prior to implantation. Cells Tissues Organs 2001; 169:34-41. (Pubitemid 32437042)
    • (2001) Cells Tissues Organs , vol.169 , Issue.1 , pp. 34-41
    • Torok, E.1    Pollok, J.-M.2    Ma, P.X.3    Kaufmann, P.M.4    Dandri, M.5    Petersen, J.6    Burda, M.-R.7    Kluth, D.8    Perner, F.9    Rogiers, X.10
  • 28
    • 0035167454 scopus 로고    scopus 로고
    • A workingperson's guide to deconvolution in light microscopy
    • Wallace W, Schaefer L H, Swedlow J R. A workingperson's guide to deconvolution in light microscopy. BioTechniques 2001;31:1076-1097 (Pubitemid 33063318)
    • (2001) BioTechniques , vol.31 , Issue.5 , pp. 1076-1097
    • Wallace, W.1    Schaefer, L.H.2    Swedlow, J.R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.