-
1
-
-
26944477031
-
Evolution of genome size in conifers
-
Ahuja MR, Neale DB (2005) Evolution of genome size in conifers. Silvae Genetica 54:126-137
-
(2005)
Silvae Genetica
, vol.54
, pp. 126-137
-
-
Ahuja, M.R.1
Neale, D.B.2
-
2
-
-
0031303812
-
Distinguishing the effects of mutational biases and natural selection on DNA sequence variation
-
Akashi H (1997) Distinguishing the effects of mutational biases and natural selection on DNA sequence variation. Genetics 147:1989-1991
-
(1997)
Genetics
, vol.147
, pp. 1989-1991
-
-
Akashi, H.1
-
3
-
-
0028220048
-
Synonymous codon usage in Drosophila melanogaster: Natural selection and translational accuracy
-
Akashi H (1999) Synonymous codon usage in Drosophila melanogaster: natural selection and translational accuracy. Genetics 136:927-935
-
(1999)
Genetics
, vol.136
, pp. 927-935
-
-
Akashi, H.1
-
4
-
-
0031202659
-
A deletion in the PHYD gene of the Arabidosis Wassilewskija ecotype defines a role for phytochrome D in far red/red light sensing
-
Aukerman MJ, Hirschfeld M, Wester L, Clack T, Amasino RM, Sharrock RA (1997) A deletion in the PHYD gene of the Arabidosis Wassilewskija ecotype defines a role for phytochrome D in far red/red light sensing. Plant Cell 9:1317-1326
-
(1997)
Plant Cell
, vol.9
, pp. 1317-1326
-
-
Aukerman, M.J.1
Hirschfeld, M.2
Wester, L.3
Clack, T.4
Amasino, R.M.5
Sharrock, R.A.6
-
5
-
-
0346155809
-
Pseudogenes: Are they "junk" or functional DNA?
-
Balakirev ES, Ayala FJ (2003) Pseudogenes: are they "junk" or functional DNA? Annu Rev Genet 37:123-151
-
(2003)
Annu Rev Genet
, vol.37
, pp. 123-151
-
-
Balakirev, E.S.1
Ayala, F.J.2
-
6
-
-
0038204408
-
Phylogeny for the faint of heart: A tutorial
-
Baldauf SL (2003) Phylogeny for the faint of heart: a tutorial. Trends Genet 19:345-351
-
(2003)
Trends Genet
, vol.19
, pp. 345-351
-
-
Baldauf, S.L.1
-
7
-
-
0027305597
-
The effect of deleterious mutations on neutral molecular variation
-
Charlesworth B, Morgan MT, Charlesworth D (1993) The effect of deleterious mutations on neutral molecular variation. Genetics 134:1289-1303
-
(1993)
Genetics
, vol.134
, pp. 1289-1303
-
-
Charlesworth, B.1
Morgan, M.T.2
Charlesworth, D.3
-
8
-
-
0036149896
-
Low nucleotide diversity at the pal1 locus in the widely distributed Pinus sylvestris
-
Dvornyk V, Sirviö A, Mikkonen M, Savolainen O (2002) Low nucleotide diversity at the pal1 locus in the widely distributed Pinus sylvestris. Mol Biol Evol 19:179-188
-
(2002)
Mol Biol Evol
, vol.19
, pp. 179-188
-
-
Dvornyk, V.1
Sirviö, A.2
Mikkonen, M.3
Savolainen, O.4
-
9
-
-
0026681074
-
Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondria DNA restriction data
-
Excoffier L, Smouse PE, Quattro JM (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondria DNA restriction data. Genetics 131:479-491
-
(1992)
Genetics
, vol.131
, pp. 479-491
-
-
Excoffier, L.1
Smouse, P.E.2
Quattro, J.M.3
-
10
-
-
0038788126
-
Nucleotide diversity at two phytochrome loci along a latitudinal cline in Pinus sylvestris
-
García-Gil MR, Mikkonen M, Savolainen O (2003) Nucleotide diversity at two phytochrome loci along a latitudinal cline in Pinus sylvestris. Mol Ecol 12:1195-1206
-
(2003)
Mol Ecol
, vol.12
, pp. 1195-1206
-
-
García-Gil, M.R.1
Mikkonen, M.2
Savolainen, O.3
-
11
-
-
0035543129
-
Variation in the nrDNA ITS of Pinus cembroides: Implications for molecular systematics studies of pine species complexes
-
Gernandt DS, Liston A, Pineiro D (2001) Variation in the nrDNA ITS of Pinus cembroides: implications for molecular systematics studies of pine species complexes. Mol Phylogenet Evol 21:449-467
-
(2001)
Mol Phylogenet Evol
, vol.21
, pp. 449-467
-
-
Gernandt, D.S.1
Liston, A.2
Pineiro, D.3
-
12
-
-
0024234855
-
CLUSTAL: A package for performing multiple sequence alignment on a microcomputer
-
Higgins DG, Sharp PM (1988) CLUSTAL: a package for performing multiple sequence alignment on a microcomputer. Gene 73:237-244
-
(1988)
Gene
, vol.73
, pp. 237-244
-
-
Higgins, D.G.1
Sharp, P.M.2
-
13
-
-
0034849408
-
MRBAYES: Bayesian inference of phylogenetic trees
-
Huelsenbeck JP, Ronquist F (2001) MRBAYES: bayesian inference of phylogenetic trees. Bioinformatics 17:754-755
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
16
-
-
0030773907
-
Complex gene families in pine genomes
-
Kinlaw CS, Neale DB (1997) Complex gene families in pine genomes. Trends Plant Sci 2:356-359
-
(1997)
Trends Plant Sci
, vol.2
, pp. 356-359
-
-
Kinlaw, C.S.1
Neale, D.B.2
-
17
-
-
0032033629
-
Molecular evolution of cdc2 pseudogenes in spruce (Picea)
-
Kvarnheden A, Albert VA, Engström P (1995) Molecular evolution of cdc2 pseudogenes in spruce (Picea). Plant Mol Biol 36:767-774
-
(1995)
Plant Mol Biol
, vol.36
, pp. 767-774
-
-
Kvarnheden, A.1
Albert, V.A.2
Engström, P.3
-
18
-
-
0003421005
-
-
Sinauer Associates Sunderland, MA
-
Li WH (1997) Molecular evolution. Sinauer Associates, Sunderland, MA
-
(1997)
Molecular Evolution
-
-
Li, W.H.1
-
19
-
-
0019726330
-
Pseudogenes as a paradigm of neutral evolution
-
Li WH, Gojobori T, Mei M (1981) Pseudogenes as a paradigm of neutral evolution. Nature 292:237-239
-
(1981)
Nature
, vol.292
, pp. 237-239
-
-
Li, W.H.1
Gojobori, T.2
Mei, M.3
-
20
-
-
0034634395
-
The evolutionary fate and consequences of duplicate genes
-
Lynch M, Conery JS (2000) The evolutionary fate and consequences of duplicate genes. Science 290:1151-1155
-
(2000)
Science
, vol.290
, pp. 1151-1155
-
-
Lynch, M.1
Conery, J.S.2
-
21
-
-
0033615479
-
The root of angiosperm phylogeny inferred from duplicate phytochrome genes
-
Mathews S, Donoghue MJ (1999) The root of angiosperm phylogeny inferred from duplicate phytochrome genes. Science 286:947-950
-
(1999)
Science
, vol.286
, pp. 947-950
-
-
Mathews, S.1
Donoghue, M.J.2
-
22
-
-
0026428610
-
Adaptive evolution of the "adh" locus in "drosophila"
-
McDonald JH, Kreitman M (1991) Adaptive evolution of the "Adh" locus in "Drosophila". Nature 351:652-654
-
(1991)
Nature
, vol.351
, pp. 652-654
-
-
McDonald, J.H.1
Kreitman, M.2
-
23
-
-
33646375934
-
The causes of protein evolutionary rate variation
-
Mclnerney JO (2006) The causes of protein evolutionary rate variation. Trends Ecol Evol 21:230-232
-
(2006)
Trends Ecol Evol
, vol.21
, pp. 230-232
-
-
McLnerney, J.O.1
-
25
-
-
0000211211
-
Mesozoic conifers
-
Miller CN (1977) Mesozoic conifers. Bot Rev 43:217-280
-
(1977)
Bot Rev
, vol.43
, pp. 217-280
-
-
Miller, C.N.1
-
26
-
-
0032412237
-
Nuclear DNA amounts in gymnosperms
-
Suppl A
-
Murray BG (1998) Nuclear DNA amounts in gymnosperms. Ann Bot 82 (Suppl A):3-15
-
(1998)
Ann Bot
, vol.82
, pp. 3-15
-
-
Murray, B.G.1
-
30
-
-
0034809334
-
Statistical tests of selective neutrality in the age of genomics
-
Nielsen R (2001) Statistical tests of selective neutrality in the age of genomics. Heredity 86:641-647
-
(2001)
Heredity
, vol.86
, pp. 641-647
-
-
Nielsen, R.1
-
31
-
-
0033573925
-
Patterns of nucleotide substitution in Drosophila and mammalian genomes
-
Petrov DA, Hartl DL (1999) Patterns of nucleotide substitution in Drosophila and mammalian genomes. Proc Natl Acad Sci USA 96:1475-1479
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 1475-1479
-
-
Petrov, D.A.1
Hartl, D.L.2
-
32
-
-
0029856377
-
High intrinsic rate of DNA loss in Drosophila
-
Petrov DA, Lozovskaya ER, Hartl DL (1996) High intrinsic rate of DNA loss in Drosophila. Nature 384:346-349
-
(1996)
Nature
, vol.384
, pp. 346-349
-
-
Petrov, D.A.1
Lozovskaya, E.R.2
Hartl, D.L.3
-
33
-
-
0034635568
-
Evidence of DNA loss as a determinant of genome size
-
Petrov DA, Sangster TA, Johnston S, Hartl DL, Shaw KL (2000) Evidence of DNA loss as a determinant of genome size. Science 287:1060-1062
-
(2000)
Science
, vol.287
, pp. 1060-1062
-
-
Petrov, D.A.1
Sangster, T.A.2
Johnston, S.3
Hartl, D.L.4
Shaw, K.L.5
-
34
-
-
34547828004
-
Genetic quality of individuals impacts population dynamics
-
Reed DH, Nicholas AC, Stratton GE (2007) Genetic quality of individuals impacts population dynamics. Anim Conserv 10:275-283
-
(2007)
Anim Conserv
, vol.10
, pp. 275-283
-
-
Reed, D.H.1
Nicholas, A.C.2
Stratton, G.E.3
-
35
-
-
0036664974
-
Molecular characterization and evolution of the cytosolic class II 17.0 kDa small heat-shock protein gene family from Picea abies (L.)
-
Schubert R, Manteuffel R, Eich J, Häger KP (2002) Molecular characterization and evolution of the cytosolic class II 17.0 kDa small heat-shock protein gene family from Picea abies (L.). Plant Sci 163:1-12
-
(2002)
Plant Sci
, vol.163
, pp. 1-12
-
-
Schubert, R.1
Manteuffel, R.2
Eich, J.3
Häger, K.P.4
-
36
-
-
0032143143
-
Loblolly pine (Pinus taeda L) contains multiple expressed genes encoding light-dependent NADPH:protochlorophyllide oxidoreductase (POR)
-
Skinner JS, Timko MP (1998). Loblolly pine (Pinus taeda L) contains multiple expressed genes encoding light-dependent NADPH:protochlorophyllide oxidoreductase (POR). Plant Cell Physiol 39:795-806
-
(1998)
Plant Cell Physiol
, vol.39
, pp. 795-806
-
-
Skinner, J.S.1
Timko, M.P.2
-
37
-
-
0032849322
-
A method for detecting positive selection at single amino acid sites
-
Suzuki Y, Gojobori T (1999) A method for detecting positive selection at single amino acid sites. Mol Biol Evol 16:1315-1328
-
(1999)
Mol Biol Evol
, vol.16
, pp. 1315-1328
-
-
Suzuki, Y.1
Gojobori, T.2
-
38
-
-
0344585286
-
Adaptive evolution of genes and gene families
-
Swanson WJ (2003) Adaptive evolution of genes and gene families. Curr Opin Genet Dev 13:617-622
-
(2003)
Curr Opin Genet Dev
, vol.13
, pp. 617-622
-
-
Swanson, W.J.1
-
39
-
-
0028043489
-
Loss of all Ndh genes as determined by sequencing the entire chloroplast genome of the black pine Pinus thumbergii
-
Wakasugi T, Tsudzuki J, Nakashima K, Tsudzuki T, Sugiura M (1994) Loss of all Ndh genes as determined by sequencing the entire chloroplast genome of the black pine Pinus thumbergii. Proc Natl Acad Sci USA 91:9794-9798
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 9794-9798
-
-
Wakasugi, T.1
Tsudzuki, J.2
Nakashima, K.3
Tsudzuki, T.4
Sugiura, M.5
-
40
-
-
0021066331
-
On the time for gene silencing at duplicated loci
-
Watterson GA (1983) On the time for gene silencing at duplicated loci. Genetics 105:745-766
-
(1983)
Genetics
, vol.105
, pp. 745-766
-
-
Watterson, G.A.1
-
41
-
-
4644290626
-
Recolonization and radiation in Larix (Pinaceae): Evidence from nuclear ribosomal DNA paralogues
-
Wei XX, Wang XQ (2004) Recolonization and radiation in Larix (Pinaceae): evidence from nuclear ribosomal DNA paralogues. Mol Ecol 13:3115-3123
-
(2004)
Mol Ecol
, vol.13
, pp. 3115-3123
-
-
Wei, X.X.1
Wang, X.Q.2
-
43
-
-
0025318864
-
The "effective number of codons" used in a gene
-
Wright F (1986) The "effective number of codons" used in a gene. Gene 87:23-29
-
(1986)
Gene
, vol.87
, pp. 23-29
-
-
Wright, F.1
-
44
-
-
20644465818
-
A highly unexpected strong correlation between fixation probability of nonsynonymous mutations and mutation rate
-
Wyckoff GJ, Malcom CM, Vallender EJ, Lahn BT (2005) A highly unexpected strong correlation between fixation probability of nonsynonymous mutations and mutation rate. Trends Genet 21:381-385
-
(2005)
Trends Genet
, vol.21
, pp. 381-385
-
-
Wyckoff, G.J.1
Malcom, C.M.2
Vallender, E.J.3
Lahn, B.T.4
-
45
-
-
0029970817
-
Maximizing transcription efficiency causes codon usage bias
-
Xia X (1996) Maximizing transcription efficiency causes codon usage bias. Genetics 144:1309-1320
-
(1996)
Genetics
, vol.144
, pp. 1309-1320
-
-
Xia, X.1
-
47
-
-
0033639150
-
Statistical methods for detecting molecular adaptation
-
Yang Z, Bielawski JP (2000) Statistical methods for detecting molecular adaptation. TREE 15:496-503
-
(2000)
TREE
, vol.15
, pp. 496-503
-
-
Yang, Z.1
Bielawski, J.P.2
|