-
1
-
-
33744962980
-
Analysis of bacterial diversity and community structure in forest soils contaminated with fuel hydrocarbon
-
Ahn, J. H., M. S. Kim, M. C. Kim, J. S. Lim, G. T. Lee, J. K. Yun, T. Kim, T. Kim, and J. O. Ka. 2006. Analysis of bacterial diversity and community structure in forest soils contaminated with fuel hydrocarbon. J. Microbiol. Biotechnol. 16: 704-715.
-
(2006)
J. Microbiol. Biotechnol
, vol.16
, pp. 704-715
-
-
Ahn, J.H.1
Kim, M.S.2
Kim, M.C.3
Lim, J.S.4
Lee, G.T.5
Yun, J.K.6
Kim, T.7
Kim, T.8
Ka, J.O.9
-
2
-
-
4644280496
-
Anaerobic hydrocarbon biodegradation in deep subsurface oil reservoirs
-
Aitken, C. M., D. M. Jones, and S. R. Larter. 2004. Anaerobic hydrocarbon biodegradation in deep subsurface oil reservoirs. Nature 431: 291-294.
-
(2004)
Nature
, vol.431
, pp. 291-294
-
-
Aitken, C.M.1
Jones, D.M.2
Larter, S.R.3
-
3
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., T. L. Madden, A. A. Schäffer, J. Zhang, Z. Zhang, W. Miller, and D. J. Lipman. 1997. Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res. 25: 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
4
-
-
0028946084
-
Phylogenetic identification and in situ detection of individual microbial cells without cultivation
-
Amann, R. I., W. Ludwig, and K. H. Schleifer. 1995. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol. Rev. 59: 143-169.
-
(1995)
Microbiol. Rev
, vol.59
, pp. 143-169
-
-
Amann, R.I.1
Ludwig, W.2
Schleifer, K.H.3
-
5
-
-
0001480888
-
Hydrocarbon biodegradation and oil-spill remediation
-
Atlas, R. M. and R. Bartha. 1992. Hydrocarbon biodegradation and oil-spill remediation. Adv. Microb. Ecol. 12: 287-338.
-
(1992)
Adv. Microb. Ecol
, vol.12
, pp. 287-338
-
-
Atlas, R.M.1
Bartha, R.2
-
6
-
-
51249174563
-
Response of microbial populations to environmental disturbance
-
Atlas, R. M., A. Horowitz, M. Krichevsky, and A. K. Bej. 1991. Response of microbial populations to environmental disturbance. Microb. Ecol. 22: 249-256.
-
(1991)
Microb. Ecol
, vol.22
, pp. 249-256
-
-
Atlas, R.M.1
Horowitz, A.2
Krichevsky, M.3
Bej, A.K.4
-
7
-
-
0141560647
-
Genes involved in the degradation of ether fuels by bacteria of the Mycobacterium/Rhodococcus group
-
Béguin, P., S. Chauvaux, I. Miras, A. François, F. Fayolle, and F. Monot. 2003. Genes involved in the degradation of ether fuels by bacteria of the Mycobacterium/Rhodococcus group. Oil Gas Sci. Technol. Rev. IFP 58: 489-495.
-
(2003)
Oil Gas Sci. Technol. Rev. IFP
, vol.58
, pp. 489-495
-
-
Béguin, P.1
Chauvaux, S.2
Miras, I.3
François, A.4
Fayolle, F.5
Monot, F.6
-
8
-
-
21644438217
-
Biodegradation of polycyclic aromatic hydrocarbons by soil fungi
-
Clemente, A. R., T. A. Anazawa, and L. R. Durrant. 2001. Biodegradation of polycyclic aromatic hydrocarbons by soil fungi. Brazilian J. Microbiol. 32: 255-261.
-
(2001)
Brazilian J. Microbiol
, vol.32
, pp. 255-261
-
-
Clemente, A.R.1
Anazawa, T.A.2
Durrant, L.R.3
-
9
-
-
0033946822
-
Hydrocarbon utilization in yeast isolates found to grow in association with petroleum in a polluted ultisol of Midwestern Nigeria
-
Ekundayo, E. O. and C. O. Obuekwe. 2000. Hydrocarbon utilization in yeast isolates found to grow in association with petroleum in a polluted ultisol of Midwestern Nigeria. Environ Monit. Assess. 63: 381-387.
-
(2000)
Environ Monit. Assess
, vol.63
, pp. 381-387
-
-
Ekundayo, E.O.1
Obuekwe, C.O.2
-
10
-
-
27944437511
-
Microbial diversity: Application of microorganisms for the biodegradation of xenobiotics
-
Jain, R. K., M. Kapur, S. Labana, B. Lal, P. M. Sarma, D. Bhattacharya, and I. S. Thakur. 2005. Microbial diversity: Application of microorganisms for the biodegradation of xenobiotics. Curr. Sci. 89: 101-112.
-
(2005)
Curr. Sci
, vol.89
, pp. 101-112
-
-
Jain, R.K.1
Kapur, M.2
Labana, S.3
Lal, B.4
Sarma, P.M.5
Bhattacharya, D.6
Thakur, I.S.7
-
11
-
-
33750368884
-
Enrichment, performance, and microbial diversity of a thermophilic mediatorless microbial fuel cell
-
Jong, B. C., B. H. Kim, I. S. Chang, P. W. Y. Liew, Y. F. Choo, and G. S. Kang. 2006. Enrichment, performance, and microbial diversity of a thermophilic mediatorless microbial fuel cell. Environ. Sci. Technol. 40: 6449-6454.
-
(2006)
Environ. Sci. Technol
, vol.40
, pp. 6449-6454
-
-
Jong, B.C.1
Kim, B.H.2
Chang, I.S.3
Liew, P.W.Y.4
Choo, Y.F.5
Kang, G.S.6
-
12
-
-
0033884282
-
Bioremediation of high molecular weight polycyclic aromatic hydrocarbons: A review of the microbial degradation of benzo [a]pyrene
-
Juhasz, A. L. and R. Naidu. 2000. Bioremediation of high molecular weight polycyclic aromatic hydrocarbons: A review of the microbial degradation of benzo [a]pyrene. Int. Biodeter. Biodegrad. 45: 57-88.
-
(2000)
Int. Biodeter. Biodegrad
, vol.45
, pp. 57-88
-
-
Juhasz, A.L.1
Naidu, R.2
-
13
-
-
12544249618
-
Bacterial community dynamics during in-situ bioremediation of petroleum waste sludge in landfarming sites
-
Katsivela, E., E. R. B. Moore, D. Maroukli, C. Strömpl, D. Pieper, and N. Kalogerakis. 2005. Bacterial community dynamics during in-situ bioremediation of petroleum waste sludge in landfarming sites. Biodegradation 16: 169-180.
-
(2005)
Biodegradation
, vol.16
, pp. 169-180
-
-
Katsivela, E.1
Moore, E.R.B.2
Maroukli, D.3
Strömpl, C.4
Pieper, D.5
Kalogerakis, N.6
-
14
-
-
0019296687
-
A simple method for estimating evolutionary rate of base substitution through comparatis studies of nucleotide sequences
-
Kimura, M. 1980. A simple method for estimating evolutionary rate of base substitution through comparatis studies of nucleotide sequences. J. Mol. Evol. 16: 111-120.
-
(1980)
J. Mol. Evol
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
15
-
-
0032144817
-
Biodegradation of anthracene by soil fungi
-
Krivobok, S., E. Miriouchkine, F. Seiglemurandi, and J. L. Benoit-Guyod. 1998. Biodegradation of anthracene by soil fungi. Chemosphere 37: 523-530.
-
(1998)
Chemosphere
, vol.37
, pp. 523-530
-
-
Krivobok, S.1
Miriouchkine, E.2
Seiglemurandi, F.3
Benoit-Guyod, J.L.4
-
16
-
-
3242810318
-
MEGA3: Integrated software for molecular evolutionaiy genetics analysis and sequence alignment
-
Kumar, S., K. Tamura, and M. Nei. 2004. MEGA3: Integrated software for molecular evolutionaiy genetics analysis and sequence alignment. Brief. Bioinfor. 5: 150-163.
-
(2004)
Brief. Bioinfor
, vol.5
, pp. 150-163
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
17
-
-
0001857117
-
16S/23S rRNA sequencing
-
E. E. Stackebrandt and M. Goodfellow eds, John Wiley & Sons, Chichester
-
Lane, D. J. 1991. 16S/23S rRNA sequencing, pp. 115-175. In E. E. Stackebrandt and M. Goodfellow (eds.), Nucleic Acid Techniques in Bacterial Systematics. John Wiley & Sons, Chichester.
-
(1991)
Nucleic Acid Techniques in Bacterial Systematics
, pp. 115-175
-
-
Lane, D.J.1
-
18
-
-
14744283310
-
Ecological study of the fungal populations of the acidic Tinto River in southwestern Spain
-
López-Archilla, A. I., A. E. González, M. C. Terrón, and R. Amils. 2004. Ecological study of the fungal populations of the acidic Tinto River in southwestern Spain. Can. J. Microbiol. 50: 923-934.
-
(2004)
Can. J. Microbiol
, vol.50
, pp. 923-934
-
-
López-Archilla, A.I.1
González, A.E.2
Terrón, M.C.3
Amils, R.4
-
19
-
-
0036889682
-
Assessment of fungal diversity using terminal restriction fragment (TRF) pattern analysis: Comparison of 18S and ITS ribosomal regions
-
Lord, N. S., C. W. Kaplan, P. Shank, C. L. Kitts, and S. L. Elrod. 2002. Assessment of fungal diversity using terminal restriction fragment (TRF) pattern analysis: Comparison of 18S and ITS ribosomal regions. FEMS Microbiol. Ecol. 42: 327-337.
-
(2002)
FEMS Microbiol. Ecol
, vol.42
, pp. 327-337
-
-
Lord, N.S.1
Kaplan, C.W.2
Shank, P.3
Kitts, C.L.4
Elrod, S.L.5
-
20
-
-
0027460328
-
Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
-
Muyzer, G., E. C. de Waal, and A. G. Uitterlinden. 1993. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59: 695-700.
-
(1993)
Appl. Environ. Microbiol
, vol.59
, pp. 695-700
-
-
Muyzer, G.1
de Waal, E.C.2
Uitterlinden, A.G.3
-
21
-
-
0032905977
-
Effect of crude oil and chemical additives on metabolic activity of mixed microbial populations in fresh marsh soils
-
Nyman, J. A. 1999. Effect of crude oil and chemical additives on metabolic activity of mixed microbial populations in fresh marsh soils. Microb. Ecol. 37: 152-162.
-
(1999)
Microb. Ecol
, vol.37
, pp. 152-162
-
-
Nyman, J.A.1
-
22
-
-
33751042574
-
Characterization of the microbial diversity in a Korean solar saltern by 16S rRNA gene analysis
-
Park, S. J., C. H. Kang, and S. K. Rhee. 2006. Characterization of the microbial diversity in a Korean solar saltern by 16S rRNA gene analysis. J. Microbiol. Biotechnol. 16: 1640-1645.
-
(2006)
J. Microbiol. Biotechnol
, vol.16
, pp. 1640-1645
-
-
Park, S.J.1
Kang, C.H.2
Rhee, S.K.3
-
23
-
-
0031967067
-
2-Ketocyclohexanecarboxyl coenzyme A hydrolase, the ring cleavage enzyme required for anaerobic benzoate degradation by Rhodopseudomonas palustris
-
Pelletier, D. A. and C. S. Harwood. 1998. 2-Ketocyclohexanecarboxyl coenzyme A hydrolase, the ring cleavage enzyme required for anaerobic benzoate degradation by Rhodopseudomonas palustris. J. Bacteriol. 180: 2330-2336.
-
(1998)
J. Bacteriol
, vol.180
, pp. 2330-2336
-
-
Pelletier, D.A.1
Harwood, C.S.2
-
24
-
-
17144470783
-
The microbiology of hydrocarbon degradation in subsurface petroleum reservoirs: Perspectives and prospects
-
Röling, W. F. M., I. M. Head, and S. R. Larter. 2003. The microbiology of hydrocarbon degradation in subsurface petroleum reservoirs: Perspectives and prospects. Res. Microbiol. 154: 321-328.
-
(2003)
Res. Microbiol
, vol.154
, pp. 321-328
-
-
Röling, W.F.M.1
Head, I.M.2
Larter, S.R.3
-
25
-
-
33745893787
-
Presence of opportunistic oil-degrading microorganisms operating at the initial steps of oil extraction and handling
-
Sánchez, O., I. Ferrera, N. Vigués, T. G. de Oteyza, J. O. Grimalt, and J. Mas. 2006. Presence of opportunistic oil-degrading microorganisms operating at the initial steps of oil extraction and handling. Int. Microbiol. 9: 119-124.
-
(2006)
Int. Microbiol
, vol.9
, pp. 119-124
-
-
Sánchez, O.1
Ferrera, I.2
Vigués, N.3
de Oteyza, T.G.4
Grimalt, J.O.5
Mas, J.6
-
26
-
-
0019021371
-
Anatomy of an oil spill: Long-term effects from the grounding of the barge Florida off West Falmouth, Massachusetts
-
Sanders, H. L., J. F. Grassle, G. R. Hampson, L. S. Morse, S. Garner-Price, and C. C. Jones. 1980. Anatomy of an oil spill: Long-term effects from the grounding of the barge Florida off West Falmouth, Massachusetts. J. Mar. Res. 38: 265-380.
-
(1980)
J. Mar. Res
, vol.38
, pp. 265-380
-
-
Sanders, H.L.1
Grassle, J.F.2
Hampson, G.R.3
Morse, L.S.4
Garner-Price, S.5
Jones, C.C.6
-
27
-
-
19544367285
-
Hydrocarbon contamination changes the bacterial diversity of soil from around Scott Base, Antartica
-
Saul, D. J., J. M. Aislabie, C. E. Brown, L. Harris, and J. M. Foght. 2005. Hydrocarbon contamination changes the bacterial diversity of soil from around Scott Base, Antartica. FEMS Microbiol. Ecol. 53: 141-155.
-
(2005)
FEMS Microbiol. Ecol
, vol.53
, pp. 141-155
-
-
Saul, D.J.1
Aislabie, J.M.2
Brown, C.E.3
Harris, L.4
Foght, J.M.5
-
28
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic. Acids Res. 22: 4673-4680.
-
(1994)
Nucleic. Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
29
-
-
0042417135
-
Intrinsic aromatic hydrocarbon biodegradation for groundwater remediation
-
Tiehm, A. and S. Schulze. 2003. Intrinsic aromatic hydrocarbon biodegradation for groundwater remediation. Oil Gas Sci. Technol. Rev. IFP 58: 449-462.
-
(2003)
Oil Gas Sci. Technol. Rev. IFP
, vol.58
, pp. 449-462
-
-
Tiehm, A.1
Schulze, S.2
-
30
-
-
0033506585
-
Cometabolic oxidation of phenanthrene to phenanthrene trans-9, 10-dihydrodiol by Mycobacterium strain S1 growing on anthracene in the presence of phenanthrene
-
Tongpim, S. and M. A. Pickard. 1999. Cometabolic oxidation of phenanthrene to phenanthrene trans-9, 10-dihydrodiol by Mycobacterium strain S1 growing on anthracene in the presence of phenanthrene. Can. J. Microbiol. 45: 369-376.
-
(1999)
Can. J. Microbiol
, vol.45
, pp. 369-376
-
-
Tongpim, S.1
Pickard, M.A.2
-
31
-
-
33846384691
-
Co-variations of bacterial composition and catabolic genes related to PAH degradation in a produced water treatment system consisting of successive anoxic and aerobic units
-
Wang, Z., J. Li, A. F. L. Hesham, S. He, Y. Zhang, Z. Wang, and M. Yang. 2007. Co-variations of bacterial composition and catabolic genes related to PAH degradation in a produced water treatment system consisting of successive anoxic and aerobic units. Sci. Total Environ. 373: 356-362.
-
(2007)
Sci. Total Environ
, vol.373
, pp. 356-362
-
-
Wang, Z.1
Li, J.2
Hesham, A.F.L.3
He, S.4
Zhang, Y.5
Wang, Z.6
Yang, M.7
|