메뉴 건너뛰기




Volumn , Issue , 2006, Pages 385-391

A systematic computational approach for transcription factor target gene prediction

Author keywords

[No Author keywords available]

Indexed keywords

ARTIFICIAL INTELLIGENCE; BINDING ENERGY; BINDING SITES; BIOCHEMISTRY; BIOCOMMUNICATIONS; BIOINFORMATICS; CHLORINE COMPOUNDS; FORECASTING; GENE EXPRESSION; HEURISTIC METHODS; INFORMATION SCIENCE; INFORMATION SERVICES; INTELLIGENT CONTROL; PROTEINS; SEARCH ENGINES; STATISTICAL METHODS; TARGETS; TRANSCRIPTION FACTORS;

EID: 50249102667     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/CIBCB.2006.330962     Document Type: Conference Paper
Times cited : (4)

References (26)
  • 2
    • 0002759539 scopus 로고
    • Unsupervised learning of multiple motifs in biopolymers using expectation maximization
    • T. Bailey and C. Elkan. Unsupervised learning of multiple motifs in biopolymers using expectation maximization. Machine Learning, 21:51-80, 1995.
    • (1995) Machine Learning , vol.21 , pp. 51-80
    • Bailey, T.1    Elkan, C.2
  • 3
    • 84920352056 scopus 로고    scopus 로고
    • Locating transcription factors binding sites using a variable memory markov model
    • Yonatan Bilu, Michal Linial, Noam Slonim, and Naftali Tishby. Locating transcription factors binding sites using a variable memory markov model. In ISMB, 2002.
    • (2002) ISMB
    • Bilu, Y.1    Linial, M.2    Slonim, N.3    Tishby, N.4
  • 8
    • 0010327861 scopus 로고
    • Nearest Neighbor (NN) Norms: NN Pattern Classification Techniques
    • Las Alamitos, California
    • B.V. Dasarathy. Nearest Neighbor (NN) Norms: NN Pattern Classification Techniques. IEEE Computer Society Press, Las Alamitos, California, 1991.
    • (1991) IEEE Computer Society Press
    • Dasarathy, B.V.1
  • 9
    • 0033691754 scopus 로고    scopus 로고
    • Using bayesian networks to analyze expression data
    • Nir Friedman, Michal Linial, Iftach Nachman, and Dana Pe'er. Using bayesian networks to analyze expression data. In RECOMB, pages 127-135, 2000.
    • (2000) RECOMB , pp. 127-135
    • Friedman, N.1    Linial, M.2    Nachman, I.3    Pe'er, D.4
  • 10
    • 1942501811 scopus 로고    scopus 로고
    • Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in arabidopsis
    • Hideki Goda, Shinichiro Sawa, Tadao Asami, Shozo Fujioka, Yukihisa Shimada, and Shigeo Yoshida. Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in arabidopsis. Plant Physiol., 134:1555-1573, 2004.
    • (2004) Plant Physiol , vol.134 , pp. 1555-1573
    • Goda, H.1    Sawa, S.2    Asami, T.3    Fujioka, S.4    Shimada, Y.5    Yoshida, S.6
  • 13
    • 0038702303 scopus 로고    scopus 로고
    • On machine learning methods for chinese document classification
    • Ji He, Ah-Hwee Tan, and Chew-Lim Tan. On machine learning methods for chinese document classification. Applied Intelligence, 18:311-322, 2003.
    • (2003) Applied Intelligence , vol.18 , pp. 311-322
    • He, J.1    Tan, A.-H.2    Tan, C.-L.3
  • 14
    • 84920343178 scopus 로고    scopus 로고
    • Acquaintance: Language-independent document categorization by n-grams
    • S. Huffman. Acquaintance: Language-independent document categorization by n-grams. In TREC 4 Proceedings, 1996.
    • (1996) TREC 4 Proceedings
    • Huffman, S.1
  • 15
    • 0000636553 scopus 로고    scopus 로고
    • Text categorization with support vector machines: Learning with many relevant features
    • Springer
    • T. Joachims. Text categorization with support vector machines: Learning with many relevant features. In Proceedings of the European Conference on Machine Learning, Springer, 1998.
    • (1998) Proceedings of the European Conference on Machine Learning
    • Joachims, T.1
  • 16
    • 84920348568 scopus 로고    scopus 로고
    • Wai Lam, Kon F. Low, and Chao Y Ho. Using a Bayesian network induction approach for text categorization. In Martha E. Pollack, editor, Proceedings of IJCAI-97, 15th International Joint Conference on Artificial Intelligence, pages 745-750, Nagoya, JP, 1997. Morgan Kaufmann Publishers, San Francisco, US.
    • Wai Lam, Kon F. Low, and Chao Y Ho. Using a Bayesian network induction approach for text categorization. In Martha E. Pollack, editor, Proceedings of IJCAI-97, 15th International Joint Conference on Artificial Intelligence, pages 745-750, Nagoya, JP, 1997. Morgan Kaufmann Publishers, San Francisco, US.
  • 17
    • 0031397786 scopus 로고    scopus 로고
    • A g-box-binding protein from soybean binds to the El auxin-response element in the soybean CH3 promoter and contains a proline-rich repression domain
    • Zhan-Bin Liu, Cretchen Hagen, and Tom J. Cuilfoyle. A g-box-binding protein from soybean binds to the El auxin-response element in the soybean CH3 promoter and contains a proline-rich repression domain. Plant Physiol, 115:397-407, 1997.
    • (1997) Plant Physiol , vol.115 , pp. 397-407
    • Liu, Z.-B.1    Hagen, C.2    Cuilfoyle, T.J.3
  • 18
    • 84856043672 scopus 로고
    • A mathematical theory of communication
    • Claude Shannon. A mathematical theory of communication. The Bell System Technical Journal, 27:379-423, 623-656, 1948.
    • (1948) The Bell System Technical Journal , vol.27 , Issue.379-423 , pp. 623-656
    • Shannon, C.1
  • 19
    • 0029009071 scopus 로고
    • Adaptive Resonance Associative Map
    • A.H. Tan. Adaptive Resonance Associative Map. Neural Networks, 8(3):437-446, 1995.
    • (1995) Neural Networks , vol.8 , Issue.3 , pp. 437-446
    • Tan, A.H.1
  • 22
    • 0000097141 scopus 로고    scopus 로고
    • ANN-Spec: A method for discoverying transcription factor binding sites with improved specificity
    • C.T. Workman and G.D. Stormo. ANN-Spec: A method for discoverying transcription factor binding sites with improved specificity. In Pacific Symposium on Biocomputing, volume 5, pages 464-475, 2000.
    • (2000) Pacific Symposium on Biocomputing , vol.5 , pp. 464-475
    • Workman, C.T.1    Stormo, G.D.2
  • 23
    • 0035221367 scopus 로고    scopus 로고
    • A structure-based approach for prediction of protein binding sites in gene upstream regions
    • Mandel-Gutfreund Y, Baron A, and Margalit H. A structure-based approach for prediction of protein binding sites in gene upstream regions. In Pac Symp Biocomput, pages 139-50, 2001.
    • (2001) Pac Symp Biocomput , pp. 139-150
    • Mandel-Gutfreund, Y.1    Baron, A.2    Margalit, H.3
  • 25
    • 85024373635 scopus 로고    scopus 로고
    • Y. Yang and X. Liu. A re-examination of text categorization methods. In 22nd Annual International ACM SIGIR Conference on Research and Development in Information Retrieval, pages 42-49, 1999.
    • Y. Yang and X. Liu. A re-examination of text categorization methods. In 22nd Annual International ACM SIGIR Conference on Research and Development in Information Retrieval, pages 42-49, 1999.


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.