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Volumn 254, Issue 2, 2008, Pages 308-318

Assessing chronic liver toxicity based on relative gene expression data

Author keywords

Gene interaction networks; Micro array analysis; Problem inversion; Toxicology

Indexed keywords

AROMATIC HYDROCARBON;

EID: 50149121377     PISSN: 00225193     EISSN: 10958541     Source Type: Journal    
DOI: 10.1016/j.jtbi.2008.05.032     Document Type: Article
Times cited : (11)

References (30)
  • 2
    • 0037019703 scopus 로고    scopus 로고
    • Plant-wide waste management. 1. Synthesis and multi-objective design
    • Chakraborty A., and Linninger A.A. Plant-wide waste management. 1. Synthesis and multi-objective design. Ind. Eng. Chem. Res. 41 (2002) 4591-4604
    • (2002) Ind. Eng. Chem. Res. , vol.41 , pp. 4591-4604
    • Chakraborty, A.1    Linninger, A.A.2
  • 3
    • 0037244134 scopus 로고    scopus 로고
    • Plant-wide waste management. 2. Decision making under uncertainty
    • Chakraborty A., and Linninger A.A. Plant-wide waste management. 2. Decision making under uncertainty. Ind. Eng. Chem. Res. 42 (2003) 357-369
    • (2003) Ind. Eng. Chem. Res. , vol.42 , pp. 357-369
    • Chakraborty, A.1    Linninger, A.A.2
  • 4
    • 0141455022 scopus 로고    scopus 로고
    • Plant-wide waste management. 3. Long-term operation and investment planning under uncertainty
    • Chakraborty A., Colberg R.D., and Linninger A.A. Plant-wide waste management. 3. Long-term operation and investment planning under uncertainty. Ind. Eng. Chem. Res. 42 (2003) 4772-4788
    • (2003) Ind. Eng. Chem. Res. , vol.42 , pp. 4772-4788
    • Chakraborty, A.1    Colberg, R.D.2    Linninger, A.A.3
  • 5
    • 0035824029 scopus 로고    scopus 로고
    • Regulation of gene expression in flux balance models of metabolism
    • Covert M.W., Schilling C.H., and Palsson B. Regulation of gene expression in flux balance models of metabolism. J. Theor. Biol. 213 1 (2001) 73-88
    • (2001) J. Theor. Biol. , vol.213 , Issue.1 , pp. 73-88
    • Covert, M.W.1    Schilling, C.H.2    Palsson, B.3
  • 7
    • 2942579562 scopus 로고    scopus 로고
    • Metabolic flux balance analysis and the in silico analysis of Escherichia coli K-12 gene deletions
    • Edwards J.S., and Palsson B.O. Metabolic flux balance analysis and the in silico analysis of Escherichia coli K-12 gene deletions. BMC Bioinform. 1 (2000) 1
    • (2000) BMC Bioinform. , vol.1 , pp. 1
    • Edwards, J.S.1    Palsson, B.O.2
  • 8
    • 0037313750 scopus 로고    scopus 로고
    • Genome-scale reconstruction of the Saccharomyces cerevisiae metabolic network
    • Forster L., Famili I., Fu P., Palsson B.O., and Nielsen J. Genome-scale reconstruction of the Saccharomyces cerevisiae metabolic network. Genome Res. 13 (2003) 244-253
    • (2003) Genome Res. , vol.13 , pp. 244-253
    • Forster, L.1    Famili, I.2    Fu, P.3    Palsson, B.O.4    Nielsen, J.5
  • 10
    • 0035438392 scopus 로고    scopus 로고
    • Theoretical descriptors for the correlation of aquatic toxicity of environmental pollutants by quantitative structure-toxicity relationships
    • Katritzsky A.R., and Tatham D.B. Theoretical descriptors for the correlation of aquatic toxicity of environmental pollutants by quantitative structure-toxicity relationships. J. Chem. Inf. Comp. Sci. 41 (2001) 1173-1176
    • (2001) J. Chem. Inf. Comp. Sci. , vol.41 , pp. 1173-1176
    • Katritzsky, A.R.1    Tatham, D.B.2
  • 11
    • 33846889028 scopus 로고    scopus 로고
    • Model and parameter uncertainty in distributed systems
    • Kulkarni K., Zhang L., and Linninger A.A. Model and parameter uncertainty in distributed systems. Ind. Eng. Chem. Res. 45 (2006) 7832-7840
    • (2006) Ind. Eng. Chem. Res. , vol.45 , pp. 7832-7840
    • Kulkarni, K.1    Zhang, L.2    Linninger, A.A.3
  • 12
    • 0142059296 scopus 로고    scopus 로고
    • Multivariable terrain methods
    • Lucia A., and Feng Y. Multivariable terrain methods. AIChE J. 49 (2003) 2553-2563
    • (2003) AIChE J. , vol.49 , pp. 2553-2563
    • Lucia, A.1    Feng, Y.2
  • 13
    • 33846023741 scopus 로고    scopus 로고
    • National Toxicology Program, 2006a. NTP technical report on the toxicology and carcinogenesis studies of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) (CAS no. 1746-01-6) in female Harlan Sprague-Dawley rats (Gavage studies). National Toxicological Program Technical Report Series 521, pp. 4-232.
    • National Toxicology Program, 2006a. NTP technical report on the toxicology and carcinogenesis studies of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) (CAS no. 1746-01-6) in female Harlan Sprague-Dawley rats (Gavage studies). National Toxicological Program Technical Report Series 521, pp. 4-232.
  • 14
    • 50149095498 scopus 로고    scopus 로고
    • National Toxicology Program, 2006b. NTP technical report on toxicology and carcinogenesis studies of 3,3′,4,4′,5-pentachlorobiphenyl (PCB 126) (CAS no. 57465-28-8) in female Harlan Sprague-Dawley rats (Gavage studies). National Toxicological Program Technical Report Series 520, 4-246.
    • National Toxicology Program, 2006b. NTP technical report on toxicology and carcinogenesis studies of 3,3′,4,4′,5-pentachlorobiphenyl (PCB 126) (CAS no. 57465-28-8) in female Harlan Sprague-Dawley rats (Gavage studies). National Toxicological Program Technical Report Series 520, 4-246.
  • 15
    • 33845989522 scopus 로고    scopus 로고
    • National Toxicology Program, 2006c. NTP technical report on toxicology and carcinogenesis studies of 2,2′,4,4′,5,5′-hexachlorobiphenyl (PCB 153) (CAS no. 35065-27-1) in female Harlan Sprague-Dawley rats (Gavage studies). National Toxicological Program Technical Report Series 529, pp. 4-168.
    • National Toxicology Program, 2006c. NTP technical report on toxicology and carcinogenesis studies of 2,2′,4,4′,5,5′-hexachlorobiphenyl (PCB 153) (CAS no. 35065-27-1) in female Harlan Sprague-Dawley rats (Gavage studies). National Toxicological Program Technical Report Series 529, pp. 4-168.
  • 16
    • 0141515736 scopus 로고    scopus 로고
    • MedScan, a natural language processing for MEDLINE abstracts
    • Novichkova S., Egorov S., and Daraselia N. MedScan, a natural language processing for MEDLINE abstracts. Bioinformatics 19 13 (2003) 1699-1706
    • (2003) Bioinformatics , vol.19 , Issue.13 , pp. 1699-1706
    • Novichkova, S.1    Egorov, S.2    Daraselia, N.3
  • 17
    • 23944440242 scopus 로고    scopus 로고
    • Modeling Lactococcus lactis using a genome-scale flux model
    • Oliveira A.P., Nielsen J., and Forster J. Modeling Lactococcus lactis using a genome-scale flux model. BMC Microbiol. 5 (2005) 39
    • (2005) BMC Microbiol. , vol.5 , pp. 39
    • Oliveira, A.P.1    Nielsen, J.2    Forster, J.3
  • 18
    • 4544287189 scopus 로고    scopus 로고
    • Pathway miner: extracting gene associating networks from molecular pathways for predicting the biological significance of gene expression microarray data
    • Pandey R., Guru R.K., and Mont D.W. Pathway miner: extracting gene associating networks from molecular pathways for predicting the biological significance of gene expression microarray data. Bioinformatics 20 13 (2004) 2156-2158
    • (2004) Bioinformatics , vol.20 , Issue.13 , pp. 2156-2158
    • Pandey, R.1    Guru, R.K.2    Mont, D.W.3
  • 20
    • 13544265458 scopus 로고    scopus 로고
    • Modeling hybridoma cell-metabolism using a generic genome-scale metabolic model of Mus musculus
    • Sheikh K., Forster J., and Nilesen J. Modeling hybridoma cell-metabolism using a generic genome-scale metabolic model of Mus musculus. Biotechnol. Prog. 21 (2005) 112-121
    • (2005) Biotechnol. Prog. , vol.21 , pp. 112-121
    • Sheikh, K.1    Forster, J.2    Nilesen, J.3
  • 21
    • 33745191450 scopus 로고    scopus 로고
    • Use of computer-assisted prediction of toxic effects of chemical substances
    • Simmon-Hettich B., Rothfuss A., and Steger-Hartmann T. Use of computer-assisted prediction of toxic effects of chemical substances. Toxicology 224 (2006) 156-162
    • (2006) Toxicology , vol.224 , pp. 156-162
    • Simmon-Hettich, B.1    Rothfuss, A.2    Steger-Hartmann, T.3
  • 22
    • 19844378465 scopus 로고    scopus 로고
    • Solving kinetic inversion problems via a physically bounded Gauss-Newton method
    • Tang W., Zhang L., Linninger A.A., and Tranter R.S. Solving kinetic inversion problems via a physically bounded Gauss-Newton method. Ind. Eng. Chem. Res. 44 10 (2005) 3626-3637
    • (2005) Ind. Eng. Chem. Res. , vol.44 , Issue.10 , pp. 3626-3637
    • Tang, W.1    Zhang, L.2    Linninger, A.A.3    Tranter, R.S.4
  • 23
    • 0028108519 scopus 로고
    • Metabolic flux balancing: basic concepts, scientific and practical use
    • Varma A., and Palsson B.O. Metabolic flux balancing: basic concepts, scientific and practical use. Bio/Technology 12 (1994) 994-998
    • (1994) Bio/Technology , vol.12 , pp. 994-998
    • Varma, A.1    Palsson, B.O.2
  • 24
    • 16644363090 scopus 로고    scopus 로고
    • Subchronic exposure to TCDD, PeCDF, PCB126 and PCB153: effect on hepatic gene expression
    • Vezina C.M., Walker N.J., and Olson J.R. Subchronic exposure to TCDD, PeCDF, PCB126 and PCB153: effect on hepatic gene expression. Environ. Health. Perspect. 112 (2004) 1636-1644
    • (2004) Environ. Health. Perspect. , vol.112 , pp. 1636-1644
    • Vezina, C.M.1    Walker, N.J.2    Olson, J.R.3
  • 25
    • 0036010702 scopus 로고    scopus 로고
    • Developing a methodology for an inverse quantitative structure-activity relationship using the signature molecular descriptor
    • Visco D., Pophale R., Rintoul M., and Faulon J. Developing a methodology for an inverse quantitative structure-activity relationship using the signature molecular descriptor. J. Mol. Graph. Model. 20 (2002) 429-438
    • (2002) J. Mol. Graph. Model. , vol.20 , pp. 429-438
    • Visco, D.1    Pophale, R.2    Rintoul, M.3    Faulon, J.4
  • 26
    • 0032617396 scopus 로고    scopus 로고
    • Modeling regulatory networks with weight matrices
    • Weaver D., Workman C., and Stormo G. Modeling regulatory networks with weight matrices. Pacific Symp. Biocomp. 99 4 (1999) 112-123
    • (1999) Pacific Symp. Biocomp. , vol.99 , Issue.4 , pp. 112-123
    • Weaver, D.1    Workman, C.2    Stormo, G.3
  • 27
    • 28544440044 scopus 로고    scopus 로고
    • The signature molecular descriptor. 5. The design of hydrofluororther foam blowing agents using inverse-QSAR
    • Weis D., Faulon J., LeBorne R., and Visco D. The signature molecular descriptor. 5. The design of hydrofluororther foam blowing agents using inverse-QSAR. Ind. Eng. Chem. Res. 44 (2005) 8883-8891
    • (2005) Ind. Eng. Chem. Res. , vol.44 , pp. 8883-8891
    • Weis, D.1    Faulon, J.2    LeBorne, R.3    Visco, D.4
  • 28
    • 39149115688 scopus 로고    scopus 로고
    • Bioinformatics applications for pathway analysis of microarray data
    • Werner T. Bioinformatics applications for pathway analysis of microarray data. Curr. Opin. Biotechnol. 19 1 (2008) 50-54
    • (2008) Curr. Opin. Biotechnol. , vol.19 , Issue.1 , pp. 50-54
    • Werner, T.1
  • 29
    • 0041475858 scopus 로고    scopus 로고
    • A multiple in silico program approach for the prediction of mutagenicity from chemical structure
    • White A.C., Mueller R.A., Gallavan R.H., Aaron S., and Wilson A.G. A multiple in silico program approach for the prediction of mutagenicity from chemical structure. Mutat. Res. 539 (2003) 77-89
    • (2003) Mutat. Res. , vol.539 , pp. 77-89
    • White, A.C.1    Mueller, R.A.2    Gallavan, R.H.3    Aaron, S.4    Wilson, A.G.5
  • 30
    • 33846860830 scopus 로고    scopus 로고
    • Discovery of transport and reaction properties in distributed systems
    • Zhang L., Kulkarni K., Somayaji M.R., Xenos M., and Linninger A.A. Discovery of transport and reaction properties in distributed systems. AIChE J. 53 2 (2007) 381-396
    • (2007) AIChE J. , vol.53 , Issue.2 , pp. 381-396
    • Zhang, L.1    Kulkarni, K.2    Somayaji, M.R.3    Xenos, M.4    Linninger, A.A.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.