메뉴 건너뛰기




Volumn 105, Issue 33, 2008, Pages 11845-11850

Double-strand breaks associated with repetitive DNA can reshape the genome

Author keywords

Ectopic recombination; Gamma radiation; Genome rearrangements; Nonallelic homologous recombination; Retrotransposon

Indexed keywords

REPETITIVE DNA;

EID: 50149084043     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.0804529105     Document Type: Article
Times cited : (197)

References (35)
  • 1
    • 33747830026 scopus 로고
    • Artificial transmutation of the gene
    • Muller HJ (1927) Artificial transmutation of the gene. Science 66:84-87.
    • (1927) Science , vol.66 , pp. 84-87
    • Muller, H.J.1
  • 2
    • 50149099840 scopus 로고    scopus 로고
    • McClintock B (1931) Cytological observations of deficiencies involving known genes, translocations and inversions in Zea mays. MO Agric Exp Station Res Bull 163:1-30.
    • McClintock B (1931) Cytological observations of deficiencies involving known genes, translocations and inversions in Zea mays. MO Agric Exp Station Res Bull 163:1-30.
  • 3
    • 0034733693 scopus 로고    scopus 로고
    • Damage-induced recombination in the yeast Saccharomyces cerevisiae
    • Kupiec M (2000) Damage-induced recombination in the yeast Saccharomyces cerevisiae. Mutat Res 451:91-105.
    • (2000) Mutat Res , vol.451 , pp. 91-105
    • Kupiec, M.1
  • 4
    • 0028196870 scopus 로고
    • DNA-damaging agents stimulate the formation of directed reciprocal translocations in Saccharomyces cerevisiae
    • Fasullo M, Dave P, Rothstein R (1994) DNA-damaging agents stimulate the formation of directed reciprocal translocations in Saccharomyces cerevisiae. Mutat Res 314:121-133.
    • (1994) Mutat Res , vol.314 , pp. 121-133
    • Fasullo, M.1    Dave, P.2    Rothstein, R.3
  • 5
    • 0037356692 scopus 로고    scopus 로고
    • Induction of genome instability by DNA damage in Saccharomyces cerevisiae
    • Myung K, Kolodner RD (2003) Induction of genome instability by DNA damage in Saccharomyces cerevisiae. DNA Repair (Amst) 2:243-258.
    • (2003) DNA Repair (Amst) , vol.2 , pp. 243-258
    • Myung, K.1    Kolodner, R.D.2
  • 6
    • 33846704345 scopus 로고    scopus 로고
    • Inviting instability: Transposable elements, doublestrand breaks, and the maintenance of genome integrity
    • Hedges DJ, Deininger PL (2007) Inviting instability: Transposable elements, doublestrand breaks, and the maintenance of genome integrity. Mutat Res 616:46-59.
    • (2007) Mutat Res , vol.616 , pp. 46-59
    • Hedges, D.J.1    Deininger, P.L.2
  • 7
    • 38049155945 scopus 로고    scopus 로고
    • Regulation of DNA double-strand break repair pathway choice
    • Shrivastav M, De Haro LP, Nickoloff JA (2008) Regulation of DNA double-strand break repair pathway choice. Cell Res 18:134-147.
    • (2008) Cell Res , vol.18 , pp. 134-147
    • Shrivastav, M.1    De Haro, L.P.2    Nickoloff, J.A.3
  • 8
    • 0019187705 scopus 로고
    • Cell-cycle-specific repair of DNA double strand breaks in Saccharomyces cerevisiae
    • Brunborg G, Resnick MA, Williamson DH (1980) Cell-cycle-specific repair of DNA double strand breaks in Saccharomyces cerevisiae. Radiat Res 82:547-558.
    • (1980) Radiat Res , vol.82 , pp. 547-558
    • Brunborg, G.1    Resnick, M.A.2    Williamson, D.H.3
  • 9
    • 33745209199 scopus 로고    scopus 로고
    • Analysis of gross-chromosomal rearrangements in. Saccharomyces cerevisiae
    • Schmidt KH, Pennaneach V, Putnam CD, Kolodner RD (2006) Analysis of gross-chromosomal rearrangements in. Saccharomyces cerevisiae. Methods Enzymol 409:462-476.
    • (2006) Methods Enzymol , vol.409 , pp. 462-476
    • Schmidt, K.H.1    Pennaneach, V.2    Putnam, C.D.3    Kolodner, R.D.4
  • 10
    • 0031981939 scopus 로고    scopus 로고
    • Radiation-induced chromosome aberrations in Saccharomyces cerevisiae: Influence of DNA repair pathways
    • Friedl AA, Kiechle M, Fellerhoff B, Eckardt-Schupp F (1998) Radiation-induced chromosome aberrations in Saccharomyces cerevisiae: Influence of DNA repair pathways. Genetics 148:975-988.
    • (1998) Genetics , vol.148 , pp. 975-988
    • Friedl, A.A.1    Kiechle, M.2    Fellerhoff, B.3    Eckardt-Schupp, F.4
  • 11
    • 0031832807 scopus 로고    scopus 로고
    • Transposable elements and genome organization: A comprehensive survey of retrotransposons revealed by the complete Saccharomyces cerevisiae genome sequence
    • Kim JM, Vanguri S, Boeke JD, Gabriel A, Voytas DF (1998) Transposable elements and genome organization: A comprehensive survey of retrotransposons revealed by the complete Saccharomyces cerevisiae genome sequence. Genome Res 8:464-478.
    • (1998) Genome Res , vol.8 , pp. 464-478
    • Kim, J.M.1    Vanguri, S.2    Boeke, J.D.3    Gabriel, A.4    Voytas, D.F.5
  • 12
    • 0038349948 scopus 로고    scopus 로고
    • Sequencing and comparison of yeast species to identify genes and regulatory elements
    • Kellis M, Patterson N, Endrizzi M, Birren B, Lander ES (2003) Sequencing and comparison of yeast species to identify genes and regulatory elements. Nature 423:241-254.
    • (2003) Nature , vol.423 , pp. 241-254
    • Kellis, M.1    Patterson, N.2    Endrizzi, M.3    Birren, B.4    Lander, E.S.5
  • 13
    • 0037058930 scopus 로고    scopus 로고
    • Characteristic genome rearrangements in experimental evolution of Saccharomyces cerevisiae
    • Dunham MJ, et al. (2002) Characteristic genome rearrangements in experimental evolution of Saccharomyces cerevisiae. Proc Natl Acad Sci USA 99:16144-16149.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 16144-16149
    • Dunham, M.J.1
  • 14
    • 33745474120 scopus 로고    scopus 로고
    • Break-induced replication and recombinational telomere elongation in yeast
    • McEachern MJ, Haber JE (2006) Break-induced replication and recombinational telomere elongation in yeast. Annu Rev Biochem 75:111-135.
    • (2006) Annu Rev Biochem , vol.75 , pp. 111-135
    • McEachern, M.J.1    Haber, J.E.2
  • 15
    • 34247611513 scopus 로고    scopus 로고
    • Template switching during break-induced replication
    • Smith CE, Llorente B, Symington LS (2007) Template switching during break-induced replication. Nature 447:102-105.
    • (2007) Nature , vol.447 , pp. 102-105
    • Smith, C.E.1    Llorente, B.2    Symington, L.S.3
  • 16
    • 0026888629 scopus 로고
    • Recombinant repair of diverged DNAs: A study of homoeologous chromosomes and mammalian YACs in yeast
    • Resnick MA, et al. (1992) Recombinant repair of diverged DNAs: A study of homoeologous chromosomes and mammalian YACs in yeast. Mol Gen Genet 234:65-73.
    • (1992) Mol Gen Genet , vol.234 , pp. 65-73
    • Resnick, M.A.1
  • 17
    • 0024507116 scopus 로고
    • Lack of DNA homology in a pair of divergent chromosomes greatly sensitizes them to loss by DNA damage
    • Resnick MA, Skaanild M, Nilsson-Tillgren T (1989) Lack of DNA homology in a pair of divergent chromosomes greatly sensitizes them to loss by DNA damage. Proc Natl Acad Sci USA 86:2276-2280.
    • (1989) Proc Natl Acad Sci USA , vol.86 , pp. 2276-2280
    • Resnick, M.A.1    Skaanild, M.2    Nilsson-Tillgren, T.3
  • 18
    • 14844286404 scopus 로고    scopus 로고
    • Chromosomal translocations in yeast induced by low levels of DNA polymerase amodel for chromosome fragile sites
    • Lemoine FJ, Degtyareva NP, Lobachev K, Petes TD (2005) Chromosomal translocations in yeast induced by low levels of DNA polymerase amodel for chromosome fragile sites. Cell 120:587-598.
    • (2005) Cell , vol.120 , pp. 587-598
    • Lemoine, F.J.1    Degtyareva, N.P.2    Lobachev, K.3    Petes, T.D.4
  • 19
    • 34147205098 scopus 로고    scopus 로고
    • Inverted DNA repeats channel repair of distant double-strand breaks into chromatid fusions and chromosomal rearrangements
    • VanHulle K, et al. (2007) Inverted DNA repeats channel repair of distant double-strand breaks into chromatid fusions and chromosomal rearrangements. Mol Cell Biol 27:2601-2614.
    • (2007) Mol Cell Biol , vol.27 , pp. 2601-2614
    • VanHulle, K.1
  • 20
    • 0022194614 scopus 로고
    • Rad52-independent mitotic gene conversion in Saccharomyces cerevisiae frequently results in chromosomal loss
    • Haber JE, Hearn M (1985) Rad52-independent mitotic gene conversion in Saccharomyces cerevisiae frequently results in chromosomal loss. Genetics 111:7-22.
    • (1985) Genetics , vol.111 , pp. 7-22
    • Haber, J.E.1    Hearn, M.2
  • 21
    • 33747882660 scopus 로고    scopus 로고
    • Recombination between retrotransposons as a source of chromosome rearrangements in the yeast Saccharomyces cerevisiae
    • Mieczkowski PA, Lemoine FJ, Petes TD (2006) Recombination between retrotransposons as a source of chromosome rearrangements in the yeast Saccharomyces cerevisiae. DNA Repair (Amst) 5:1010-1020.
    • (2006) DNA Repair (Amst) , vol.5 , pp. 1010-1020
    • Mieczkowski, P.A.1    Lemoine, F.J.2    Petes, T.D.3
  • 22
    • 37249089043 scopus 로고    scopus 로고
    • Retrosequence formation restructures the yeast genome
    • Maxwell PH, Curcio MJ (2007) Retrosequence formation restructures the yeast genome. Genes Dev 21:3308-3318.
    • (2007) Genes Dev , vol.21 , pp. 3308-3318
    • Maxwell, P.H.1    Curcio, M.J.2
  • 23
    • 1642385754 scopus 로고    scopus 로고
    • Reciprocal translocations in. Saccharomyces cerevisiae formed by nonhomologous end joining
    • Yu X, Gabriel A (2004) Reciprocal translocations in. Saccharomyces cerevisiae formed by nonhomologous end joining. Genetics 166:741-751.
    • (2004) Genetics , vol.166 , pp. 741-751
    • Yu, X.1    Gabriel, A.2
  • 24
    • 0026656894 scopus 로고
    • Ectopic recombination between Ty elements in Saccharomyces cerevisiae is not induced by DNA damage
    • Parket A, Kupiec M (1992) Ectopic recombination between Ty elements in Saccharomyces cerevisiae is not induced by DNA damage. Mol Cell Biol 12:4441-4448.
    • (1992) Mol Cell Biol , vol.12 , pp. 4441-4448
    • Parket, A.1    Kupiec, M.2
  • 25
    • 0028956271 scopus 로고
    • Recombination of Ty elements in yeast can be induced by a double-strand break
    • Parket A, Inbar O, Kupiec M (1995) Recombination of Ty elements in yeast can be induced by a double-strand break. Genetics 140:67-77.
    • (1995) Genetics , vol.140 , pp. 67-77
    • Parket, A.1    Inbar, O.2    Kupiec, M.3
  • 26
    • 0030926123 scopus 로고    scopus 로고
    • Damage-induced ectopic recombination in the yeast Saccharomyces cerevisiae
    • Kupiec M, Steinlauf R (1997) Damage-induced ectopic recombination in the yeast Saccharomyces cerevisiae. Mutat Res - DNA Repair 384:33-44.
    • (1997) Mutat Res - DNA Repair , vol.384 , pp. 33-44
    • Kupiec, M.1    Steinlauf, R.2
  • 27
    • 33749533999 scopus 로고    scopus 로고
    • Reassembly of shattered chromosomes in Deinococcus radiodurans
    • Zahradka K, et al. (2006) Reassembly of shattered chromosomes in Deinococcus radiodurans. Nature 443:569-573.
    • (2006) Nature , vol.443 , pp. 569-573
    • Zahradka, K.1
  • 28
    • 13044313472 scopus 로고    scopus 로고
    • Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1
    • White O, et al. (1999) Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1. Science 286:1571-1577.
    • (1999) Science , vol.286 , pp. 1571-1577
    • White, O.1
  • 29
    • 18844460576 scopus 로고    scopus 로고
    • Genome evolution mediated by Ty elements in Saccharomyces
    • Garfinkel DJ (2005) Genome evolution mediated by Ty elements in Saccharomyces. Cytogenet Genome Res 110:63-69.
    • (2005) Cytogenet Genome Res , vol.110 , pp. 63-69
    • Garfinkel, D.J.1
  • 30
    • 34247611513 scopus 로고    scopus 로고
    • Template switching during break-induced replication
    • Smith CE, Llorente B, Symington LS (2007) Template switching during break-induced replication. Nature 447:102-105.
    • (2007) Nature , vol.447 , pp. 102-105
    • Smith, C.E.1    Llorente, B.2    Symington, L.S.3
  • 31
    • 0034713383 scopus 로고    scopus 로고
    • Chromosomal evolution in Saccharomyces
    • Fischer G, et al. (2000) Chromosomal evolution in Saccharomyces. Nature 405:451-454.
    • (2000) Nature , vol.405 , pp. 451-454
    • Fischer, G.1
  • 32
    • 12344315160 scopus 로고    scopus 로고
    • Deleterious transposable elements and the extinction of asexuals
    • Arkhipova I, Meselson M (2005) Deleterious transposable elements and the extinction of asexuals. BioEssays 27:76-85.
    • (2005) BioEssays , vol.27 , pp. 76-85
    • Arkhipova, I.1    Meselson, M.2
  • 33
    • 35348988679 scopus 로고    scopus 로고
    • Paired-end mapping reveals extensive structural variation in the human genome
    • Korbel JO, et al. (2007) Paired-end mapping reveals extensive structural variation in the human genome. Science 318:420-426.
    • (2007) Science , vol.318 , pp. 420-426
    • Korbel, J.O.1
  • 34
    • 43049143055 scopus 로고    scopus 로고
    • Mapping and sequencing of structural variation from eight human genomes
    • Kidd J, Cooper G, Donahue W, Smith D, Eichler E (2008) Mapping and sequencing of structural variation from eight human genomes. Nature 453:56.
    • (2008) Nature , vol.453 , pp. 56
    • Kidd, J.1    Cooper, G.2    Donahue, W.3    Smith, D.4    Eichler, E.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.