메뉴 건너뛰기




Volumn 17, Issue 9, 2008, Pages 1603-1610

Engineering of halophilic enzymes: Two acidic amino acid residues at the carboxy-terminal region confer halophilic characteristics to Halomonas and Pseudomonas nucleoside diphosphate kinases

Author keywords

Halomonas; Halophilic; Negative charge; Nucleoside diphosphate kinase; Reversibility; Solubility; Stability

Indexed keywords

ALANINE; AMINO ACID; GLUTAMIC ACID; NUCLEOSIDE DIPHOSPHATE KINASE;

EID: 50049123899     PISSN: 09618368     EISSN: 1469896X     Source Type: Journal    
DOI: 10.1110/ps.035725.108     Document Type: Article
Times cited : (65)

References (27)
  • 1
    • 0015217636 scopus 로고
    • Erythrocytic nucleoside diphosphokinase. V. Some properties and behavior of the pI 7.3 isozyme
    • Agarwal, R.P. and Parks Jr., R.E. 1971. Erythrocytic nucleoside diphosphokinase. V. Some properties and behavior of the pI 7.3 isozyme. J. Biol. Chem. 246: 2258-2264.
    • (1971) J. Biol. Chem , vol.246 , pp. 2258-2264
    • Agarwal, R.P.1    Parks Jr., R.E.2
  • 2
    • 0028958071 scopus 로고
    • Structure features that stabilize halophilic malate dehydrogenase from an archaebacterium
    • Dym, O., Mevarech, M., and Sussman, J.L. 1995. Structure features that stabilize halophilic malate dehydrogenase from an archaebacterium. Science 267: 1344-1346.
    • (1995) Science , vol.267 , pp. 1344-1346
    • Dym, O.1    Mevarech, M.2    Sussman, J.L.3
  • 3
    • 0026646179 scopus 로고
    • Biochemical, structural, and molecular genetic aspects of halophilism
    • Eisenberg, H., Mevarech, M., and Zaccai, G. 1992. Biochemical, structural, and molecular genetic aspects of halophilism. Adv. Protein Chem. 43: 1-62.
    • (1992) Adv. Protein Chem , vol.43 , pp. 1-62
    • Eisenberg, H.1    Mevarech, M.2    Zaccai, G.3
  • 4
    • 0030010138 scopus 로고    scopus 로고
    • Insights into protein adaptation to a saturated salt environment from the crystal structure of a halophilic 2Fe-2S ferredoxin
    • Frolow, F., Harel, M., Sussman, J.L., Mevarech, M., and Shoham, M. 1996. Insights into protein adaptation to a saturated salt environment from the crystal structure of a halophilic 2Fe-2S ferredoxin. Nat. Struct. Biol. 3: 452-458.
    • (1996) Nat. Struct. Biol , vol.3 , pp. 452-458
    • Frolow, F.1    Harel, M.2    Sussman, J.L.3    Mevarech, M.4    Shoham, M.5
  • 5
    • 0035970769 scopus 로고    scopus 로고
    • NaCl-activated nucleoside diphosphate kinase from extremely halophilic archaeon, Halobacterium salinarum, maintain native conformation without salt
    • Ishibashi, M., Tokunaga, H., Hiratsuka, K., Yonezawa, Y., Turumaru, H., Arakawa, T., and Tokunaga, M. 2001. NaCl-activated nucleoside diphosphate kinase from extremely halophilic archaeon, Halobacterium salinarum, maintain native conformation without salt. FEBS Lett. 493: 134-138.
    • (2001) FEBS Lett , vol.493 , pp. 134-138
    • Ishibashi, M.1    Tokunaga, H.2    Hiratsuka, K.3    Yonezawa, Y.4    Turumaru, H.5    Arakawa, T.6    Tokunaga, M.7
  • 6
    • 0037027525 scopus 로고    scopus 로고
    • Secondary and quaternary structural transition of the halophilic archaeon nucleoside diphosphate kinase under high- and low-salt conditions
    • Ishibashi, M., Arakawa, T., Philo, J.S., Sakashita, K., Yonezawa, Y., Tokunaga, H., and Tokunaga, M. 2002. Secondary and quaternary structural transition of the halophilic archaeon nucleoside diphosphate kinase under high- and low-salt conditions. FEMS Microbiol. Lett. 216: 235-241.
    • (2002) FEMS Microbiol. Lett , vol.216 , pp. 235-241
    • Ishibashi, M.1    Arakawa, T.2    Philo, J.S.3    Sakashita, K.4    Yonezawa, Y.5    Tokunaga, H.6    Tokunaga, M.7
  • 8
    • 0002176470 scopus 로고
    • Life in high salt and solute concentrations: Halophilic bacteria
    • ed. D.J. Kushner, pp, Academic Press, San Diego, CA
    • Kushner, D.J. 1978. Life in high salt and solute concentrations: Halophilic bacteria. In Microbial life in extreme environments (ed. D.J. Kushner), pp. 317-368. Academic Press, San Diego, CA.
    • (1978) Microbial life in extreme environments , pp. 317-368
    • Kushner, D.J.1
  • 9
    • 0002415242 scopus 로고
    • The Halobacteriaceae
    • eds C.R. Woese and R.S. Wolfe, Academic Press, Orlando, FL
    • Kushner, D.J. 1985. The Halobacteriaceae. In The bacteria (eds C.R. Woese and R.S. Wolfe), Vol. 8, pp. 171-214. Academic Press, Orlando, FL.
    • (1985) The bacteria , vol.8 , pp. 171-214
    • Kushner, D.J.1
  • 10
    • 0014949207 scopus 로고
    • Cleavage of structural proteins during the assembly of the head of bacteriophage T4
    • Laemmli, U.K. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227: 680-685.
    • (1970) Nature , vol.227 , pp. 680-685
    • Laemmli, U.K.1
  • 11
    • 0033805046 scopus 로고    scopus 로고
    • The nucleoside diphosphate kinases 1973-2000
    • Lascu, I. 2000. The nucleoside diphosphate kinases 1973-2000. J. Bioenerg. Biomembr. 32: 213-214.
    • (2000) J. Bioenerg. Biomembr , vol.32 , pp. 213-214
    • Lascu, I.1
  • 13
    • 0034166764 scopus 로고    scopus 로고
    • Halophilic adaptation of enzymes
    • Madern, D., Ebel, C., and Zaccai, G. 2000. Halophilic adaptation of enzymes. Extremophiles 4: 91-98.
    • (2000) Extremophiles , vol.4 , pp. 91-98
    • Madern, D.1    Ebel, C.2    Zaccai, G.3
  • 14
    • 0034734270 scopus 로고    scopus 로고
    • Halophilic enzymes: Proteins with a grain of salt
    • Mevarech, M., Frolow, F., and Gloss, L.M. 2000. Halophilic enzymes: Proteins with a grain of salt. Biophys. Chem. 86: 155-164.
    • (2000) Biophys. Chem , vol.86 , pp. 155-164
    • Mevarech, M.1    Frolow, F.2    Gloss, L.M.3
  • 15
    • 34247248191 scopus 로고    scopus 로고
    • The structure of the Escherichia coli nucleoside diphosphate kinase reveals a new quaternary architecture for this enzyme family
    • Moynié, L., Giraud, M.-F., Georgescauld, F., Lascu, I., and Dautant, A. 2007. The structure of the Escherichia coli nucleoside diphosphate kinase reveals a new quaternary architecture for this enzyme family. Proteins 67: 755-765.
    • (2007) Proteins , vol.67 , pp. 755-765
    • Moynié, L.1    Giraud, M.-F.2    Georgescauld, F.3    Lascu, I.4    Dautant, A.5
  • 16
    • 77956920094 scopus 로고
    • Nucleoside diphosphokinases
    • ed. P.D. Boyer, Academic Press, New York
    • Parks Jr., R.E. and Agarwal, R.P. 1973. Nucleoside diphosphokinases. In The enzymes (ed. P.D. Boyer), Vol. 8, pp. 307-334. Academic Press, New York.
    • (1973) The enzymes , vol.8 , pp. 307-334
    • Parks Jr., R.E.1    Agarwal, R.P.2
  • 17
    • 0019877658 scopus 로고
    • Structure stability of halophilic proteins
    • Rao, J.K.M. and Argos, P. 1981. Structure stability of halophilic proteins. Biochemistry 20: 6536-6543.
    • (1981) Biochemistry , vol.20 , pp. 6536-6543
    • Rao, J.K.M.1    Argos, P.2
  • 19
    • 53149119604 scopus 로고    scopus 로고
    • Identification and partial purification of DnaK homologue from extremely halophilic archaebacteria, Halobacterium cutirubrum
    • Tokunaga, H., Hara, S., Arakawa, T., Ishibashi, M., Gupta, R.S., and Tokunaga, M. 1999. Identification and partial purification of DnaK homologue from extremely halophilic archaebacteria, Halobacterium cutirubrum. J. Protein Chem. 18: 837-844.
    • (1999) J. Protein Chem , vol.18 , pp. 837-844
    • Tokunaga, H.1    Hara, S.2    Arakawa, T.3    Ishibashi, M.4    Gupta, R.S.5    Tokunaga, M.6
  • 20
    • 0842303216 scopus 로고    scopus 로고
    • Highly efficient renaturation of β-lactamase isolated from moderately halophilic bacteria
    • Tokunaga, H., Ishibashi, M., Arakawa, T., and Tokunaga, M. 2004. Highly efficient renaturation of β-lactamase isolated from moderately halophilic bacteria. FEBS Lett. 558: 7-12.
    • (2004) FEBS Lett , vol.558 , pp. 7-12
    • Tokunaga, H.1    Ishibashi, M.2    Arakawa, T.3    Tokunaga, M.4
  • 21
    • 33646394637 scopus 로고    scopus 로고
    • Contribution of halophilic nucleoside diphosphate kinase sequence to the heat stability of chimeric molecule
    • Tokunaga, H., Oda, Y., Yonezawa, Y., Arakawa, T., and Tokunaga, M. 2006. Contribution of halophilic nucleoside diphosphate kinase sequence to the heat stability of chimeric molecule. Protein Pept. Lett. 13: 525-530.
    • (2006) Protein Pept. Lett , vol.13 , pp. 525-530
    • Tokunaga, H.1    Oda, Y.2    Yonezawa, Y.3    Arakawa, T.4    Tokunaga, M.5
  • 22
    • 40849123928 scopus 로고    scopus 로고
    • Residue 134 determines the dimer-tetramer assembly of nucleoside diphosphate kinase from moderately halophilic bacteria
    • Tokunaga, H., Ishibashi, M., Arisaka, F., Arai, S., Kuroki, R., Arakawa, T., and Tokunaga, M. 2008. Residue 134 determines the dimer-tetramer assembly of nucleoside diphosphate kinase from moderately halophilic bacteria. FEBS Lett. 582: 1049-1054.
    • (2008) FEBS Lett , vol.582 , pp. 1049-1054
    • Tokunaga, H.1    Ishibashi, M.2    Arisaka, F.3    Arai, S.4    Kuroki, R.5    Arakawa, T.6    Tokunaga, M.7
  • 23
    • 33846828378 scopus 로고    scopus 로고
    • Interaction of nucleoside diphosphate kinase B with heterotrimeric G protein βγ dimers: Consequences on G protein activation and stability
    • Wieland, T. 2007. Interaction of nucleoside diphosphate kinase B with heterotrimeric G protein βγ dimers: Consequences on G protein activation and stability. Naunyn Schmiedebergs Arch. Pharmacol. 374: 373-383.
    • (2007) Naunyn Schmiedebergs Arch. Pharmacol , vol.374 , pp. 373-383
    • Wieland, T.1
  • 24
    • 0027764466 scopus 로고
    • Crystal structure of Myxococcus xanthus nucleoside diphosphate kinase and its interaction with a nucleotide substrate at 2.0 Å resolution
    • Williams, R.L., Oren, D.A., Munoz-Dorado, J., Inouye, S., Inouye, M., and Arnold, E. 1993. Crystal structure of Myxococcus xanthus nucleoside diphosphate kinase and its interaction with a nucleotide substrate at 2.0 Å resolution. J. Mol. Biol. 234: 1230-1247.
    • (1993) J. Mol. Biol , vol.234 , pp. 1230-1247
    • Williams, R.L.1    Oren, D.A.2    Munoz-Dorado, J.3    Inouye, S.4    Inouye, M.5    Arnold, E.6
  • 25
    • 0035490496 scopus 로고    scopus 로고
    • Characterization of nucleoside diphosphate kinase from moderately halophilic eubacteria
    • Yonezawa, Y., Tokunaga, H., Ishibashi, M., and Tokunaga, M. 2001. Characterization of nucleoside diphosphate kinase from moderately halophilic eubacteria. Biosci. Biotechnol. Biochem. 65: 2343-2346.
    • (2001) Biosci. Biotechnol. Biochem , vol.65 , pp. 2343-2346
    • Yonezawa, Y.1    Tokunaga, H.2    Ishibashi, M.3    Tokunaga, M.4
  • 26
    • 0042284085 scopus 로고    scopus 로고
    • Cloning, expression, and efficient purification in Escherichia coli of a halophilic nucleoside diphosphate kinase from the moderate halophile Halomonas sp. #593
    • Yonezawa, Y., Tokunaga, H., Ishibashi, M., Taura, S., and Tokunaga, M. 2003. Cloning, expression, and efficient purification in Escherichia coli of a halophilic nucleoside diphosphate kinase from the moderate halophile Halomonas sp. #593. Protein Expr. Purif. 27: 128-133.
    • (2003) Protein Expr. Purif , vol.27 , pp. 128-133
    • Yonezawa, Y.1    Tokunaga, H.2    Ishibashi, M.3    Taura, S.4    Tokunaga, M.5
  • 27
    • 33846652454 scopus 로고    scopus 로고
    • Dimeric structure of nucleoside diphosphate kinase from moderately halophilic bacterium: Contrast to the tetrameric Pseudomonas counterpart
    • Yonezawa, Y., Izutsu, K., Tokunaga, H., Maeda, H., Arakawa, T., and Tokunaga, M. 2007. Dimeric structure of nucleoside diphosphate kinase from moderately halophilic bacterium: Contrast to the tetrameric Pseudomonas counterpart. FEMS Microbiol. Lett. 268: 52-58.
    • (2007) FEMS Microbiol. Lett , vol.268 , pp. 52-58
    • Yonezawa, Y.1    Izutsu, K.2    Tokunaga, H.3    Maeda, H.4    Arakawa, T.5    Tokunaga, M.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.