-
2
-
-
0035042776
-
A literature network of human genes for high-throughput analysis of gene expression
-
11326270
-
Jenssen TK Laegreid A Komorowski J Hovig E A literature network of human genes for high-throughput analysis of gene expression Nat Genet 2001, 28(1):21-28. 11326270
-
(2001)
Nat Genet
, vol.28
, Issue.1
, pp. 21-28
-
-
Jenssen, T.K.1
Laegreid, A.2
Komorowski, J.3
Hovig, E.4
-
4
-
-
41949141883
-
e-LiSe - An online tool for finding needles in the '(Medline) haystack'
-
18321884
-
Gladki A Siedlecki P Kaczanowski S Zielenkiewicz P e-LiSe - an online tool for finding needles in the '(Medline) haystack' Bioinformatics 2008, 24(8):1115-1117. 18321884
-
(2008)
Bioinformatics
, vol.24
, Issue.8
, pp. 1115-1117
-
-
Gladki, A.1
Siedlecki, P.2
Kaczanowski, S.3
Zielenkiewicz, P.4
-
6
-
-
1342330525
-
Knowledge discovery by automated identification and ranking of implicit relationships
-
14960466
-
Wren JD Bekeredjian R Stewart JA Shohet RV Garner HR Knowledge discovery by automated identification and ranking of implicit relationships Bioinformatics 2004, 20(3):389-398. 14960466
-
(2004)
Bioinformatics
, vol.20
, Issue.3
, pp. 389-398
-
-
Wren, J.D.1
Bekeredjian, R.2
Stewart, J.A.3
Shohet, R.V.4
Garner, H.R.5
-
8
-
-
38449084004
-
Extracting unrecognized gene relationships from the biomedical literature via matrix factorizations
-
2217664 18047707
-
Kim H Park H Drake BL Extracting unrecognized gene relationships from the biomedical literature via matrix factorizations BMC Bioinformatics 2007, 8(Suppl 9):S6. 2217664 18047707
-
(2007)
BMC Bioinformatics
, vol.8
, Issue.SUPPL. 9
-
-
Kim, H.1
Park, H.2
Drake, B.L.3
-
9
-
-
33646130383
-
A hybrid method for relation extraction from biomedical literature
-
16095962
-
Huang M Zhu X Li M A hybrid method for relation extraction from biomedical literature Int J Med Inform 2006, 75(6):443-455. 16095962
-
(2006)
Int J Med Inform
, vol.75
, Issue.6
, pp. 443-455
-
-
Huang, M.1
Zhu, X.2
Li, M.3
-
10
-
-
33846482093
-
Mining of relations between proteins over biomedical scientific literature using a deep-linguistic approach
-
17052900
-
Rinaldi F Schneider G Kaljurand K Hess M Andronis C Konstandi O Persidis A Mining of relations between proteins over biomedical scientific literature using a deep-linguistic approach Artif Intell Med 2007, 39(2):127-136. 17052900
-
(2007)
Artif Intell Med
, vol.39
, Issue.2
, pp. 127-136
-
-
Rinaldi, F.1
Schneider, G.2
Kaljurand, K.3
Hess, M.4
Andronis, C.5
Konstandi, O.6
Persidis, A.7
-
11
-
-
33947368247
-
An environment for relation mining over richly annotated corpora: The case of GENIA
-
1764447 17134476
-
Rinaldi F Schneider G Kaljurand K Hess M Romacker M An environment for relation mining over richly annotated corpora: The case of GENIA BMC Bioinformatics 2006, 7(Suppl 3):S3. 1764447 17134476
-
(2006)
BMC Bioinformatics
, vol.7
, Issue.SUPPL. 3
-
-
Rinaldi, F.1
Schneider, G.2
Kaljurand, K.3
Hess, M.4
Romacker, M.5
-
12
-
-
13344278672
-
Content-rich biological network constructed by mining PubMed abstracts
-
528731 15473905
-
Chen H Sharp BM Content-rich biological network constructed by mining PubMed abstracts BMC Bioinformatics 2004, 5:147. 528731 15473905
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 147
-
-
Chen, H.1
Sharp, B.M.2
-
13
-
-
1842559914
-
Extracting human protein interactions from MEDLINE using a full-sentence parser
-
15033866
-
Daraselia N Yuryev A Egorov S Novichkova S Nikitin A Mazo I Extracting human protein interactions from MEDLINE using a full-sentence parser Bioinformatics 2004, 20(5):604-611. 15033866
-
(2004)
Bioinformatics
, vol.20
, Issue.5
, pp. 604-611
-
-
Daraselia, N.1
Yuryev, A.2
Egorov, S.3
Novichkova, S.4
Nikitin, A.5
Mazo, I.6
-
14
-
-
0141515736
-
MedScan, a natural language processing engine for MEDLINE abstracts
-
12967967
-
Novichkova S Egorov S Daraselia N MedScan, a natural language processing engine for MEDLINE abstracts Bioinformatics 2003, 19(13):1699-1706. 12967967
-
(2003)
Bioinformatics
, vol.19
, Issue.13
, pp. 1699-1706
-
-
Novichkova, S.1
Egorov, S.2
Daraselia, N.3
-
15
-
-
33645831306
-
Automatic pathway building in biological association networks
-
1435941 16563163
-
Yuryev A Mulyukov Z Kotelnikova E Maslov S Egorov S Nikitin A Daraselia N Mazo I Automatic pathway building in biological association networks BMC Bioinformatics 2006, 7:171. 1435941 16563163
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 171
-
-
Yuryev, A.1
Mulyukov, Z.2
Kotelnikova, E.3
Maslov, S.4
Egorov, S.5
Nikitin, A.6
Daraselia, N.7
Mazo, I.8
-
17
-
-
33747892781
-
Finding the evidence for protein-protein interactions from PubMed abstracts
-
16873475
-
Jang H Lim J Lim JH Park SJ Lee KC Park SH Finding the evidence for protein-protein interactions from PubMed abstracts Bioinformatics 2006, 22(14):e220-226. 16873475
-
(2006)
Bioinformatics
, vol.22
, Issue.14
-
-
Jang, H.1
Lim, J.2
Lim, J.H.3
Park, S.J.4
Lee, K.C.5
Park, S.H.6
-
18
-
-
84871981420
-
Exploiting likely-positive and unlabeled data to improve the identification of protein-protein interaction articles
-
2259404 18315856
-
Tsai RT Hung HC Dai HJ Lin YW Hsu WL Exploiting likely-positive and unlabeled data to improve the identification of protein-protein interaction articles BMC Bioinformatics 2008, 9(Suppl 1):S3. 2259404 18315856
-
(2008)
BMC Bioinformatics
, vol.9
, Issue.SUPPL. 1
-
-
Tsai, R.T.1
Hung, H.C.2
Dai, H.J.3
Lin, Y.W.4
Hsu, W.L.5
-
19
-
-
40049083982
-
Extracting interactions between proteins from the literature
-
18207462
-
Zhou D He Y Extracting interactions between proteins from the literature J Biomed Inform 2008, 41(2):393-407. 18207462
-
(2008)
J Biomed Inform
, vol.41
, Issue.2
, pp. 393-407
-
-
Zhou, D.1
He, Y.2
-
20
-
-
34748884900
-
Predicting cancer interaction networks using text-mining and structure understanding
-
1839458 17238742
-
Topinka CM Shyu CR Predicting cancer interaction networks using text-mining and structure understanding AMIA Annu Symp Proc 2006:1123. 1839458 17238742
-
(2006)
AMIA Annu Symp Proc
, pp. 1123
-
-
Topinka, C.M.1
Shyu, C.R.2
-
21
-
-
0038479969
-
Kinase pathway database: An integrated protein-kinase and NLP-based protein-interaction resource
-
403651 12799355
-
Koike A Kobayashi Y Takagi T Kinase pathway database: An integrated protein-kinase and NLP-based protein-interaction resource Genome Res 2003, 13(6A):1231-1243. 403651 12799355
-
(2003)
Genome Res
, vol.13
, Issue.6 A
, pp. 1231-1243
-
-
Koike, A.1
Kobayashi, Y.2
Takagi, T.3
-
22
-
-
0035230208
-
Bidirectional incremental parsing for automatic pathway identification with combinatory categorial grammar
-
11262958
-
Park JC Kim HS Kim JJ Bidirectional incremental parsing for automatic pathway identification with combinatory categorial grammar Pac Symp Biocomput 2001:396-407. 11262958
-
(2001)
Pac Symp Biocomput
, pp. 396-407
-
-
Park, J.C.1
Kim, H.S.2
Kim, J.J.3
-
23
-
-
2942549190
-
PreBIND and Textomy - Mining the biomedical literature for protein-protein interactions using a support vector machine
-
153503 12689350
-
Donaldson I Martin J de Bruijn B Wolting C Lay V Tuekam B Zhang S Baskin B Bader GD Michalickova K et al.: PreBIND and Textomy - mining the biomedical literature for protein-protein interactions using a support vector machine BMC Bioinformatics 2003, 4:11. 153503 12689350
-
(2003)
BMC Bioinformatics
, vol.4
, pp. 11
-
-
Donaldson, I.1
Martin, J.2
de Bruijn, B.3
Wolting, C.4
Lay, V.5
Tuekam, B.6
Zhang, S.7
Baskin, B.8
Bader, G.D.9
Michalickova, K.10
-
24
-
-
43749110484
-
Extraction of semantic biomedical relations from text using conditional random fields
-
2386138 18433469
-
Bundschus M Dejori M Stetter M Tresp V Kriegel HP Extraction of semantic biomedical relations from text using conditional random fields BMC Bioinformatics 2008, 9:207. 2386138 18433469
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 207
-
-
Bundschus, M.1
Dejori, M.2
Stetter, M.3
Tresp, V.4
Kriegel, H.P.5
-
26
-
-
37549050918
-
Kernel approaches for genic interaction extraction
-
18003645
-
Kim S Yoon J Yang J Kernel approaches for genic interaction extraction Bioinformatics 2008, 24(1):118-126. 18003645
-
(2008)
Bioinformatics
, vol.24
, Issue.1
, pp. 118-126
-
-
Kim, S.1
Yoon, J.2
Yang, J.3
-
27
-
-
13244268327
-
Extending the mutual information measure to rank inferred literature relationships
-
526381 15471547
-
Wren JD Extending the mutual information measure to rank inferred literature relationships BMC Bioinformatics 2004, 5:145. 526381 15471547
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 145
-
-
Wren, J.D.1
-
28
-
-
1042269463
-
Shared relationship analysis: Ranking set cohesion and commonalities within a literature-derived relationship network
-
14734310
-
Wren JD Garner HR Shared relationship analysis: Ranking set cohesion and commonalities within a literature-derived relationship network Bioinformatics 2004, 20(2):191-198. 14734310
-
(2004)
Bioinformatics
, vol.20
, Issue.2
, pp. 191-198
-
-
Wren, J.D.1
Garner, H.R.2
-
30
-
-
33847095048
-
Benchmarking natural-language parsers for biological applications using dependency graph
-
1797812 17254351
-
Clegg AB Shepherd AJ Benchmarking natural-language parsers for biological applications using dependency graph BMC Bioinformatics 2007, 8:, 1797812 17254351
-
(2007)
BMC Bioinformatics
, vol.8
-
-
Clegg, A.B.1
Shepherd, A.J.2
-
34
-
-
33847294345
-
RelEx - Relation extraction using dependency parse trees
-
17142812
-
Fundel K Kuffner R Zimmer R RelEx - relation extraction using dependency parse trees Bioinformatics 2007, 23(3):365-371. 17142812
-
(2007)
Bioinformatics
, vol.23
, Issue.3
, pp. 365-371
-
-
Fundel, K.1
Kuffner, R.2
Zimmer, R.3
-
37
-
-
4944229711
-
GENIA corpus - Semantically annotated corpus for bio-textmining
-
12855455
-
Kim JD Ohta T Tateisi Y Tsujii J GENIA corpus - semantically annotated corpus for bio-textmining Bioinformatics 2003, 19(Suppl 1):i180-182. 12855455
-
(2003)
Bioinformatics
, vol.19
, Issue.SUPPL. 1
-
-
Kim, J.D.1
Ohta, T.2
Tateisi, Y.3
Tsujii, J.4
-
38
-
-
40749087717
-
Corpus annotation for mining biomedical events from literature
-
2267702 18182099
-
Kim JD Ohta T Tsujii J Corpus annotation for mining biomedical events from literature BMC Bioinformatics 2008, 9:10. 2267702 18182099
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 10
-
-
Kim, J.D.1
Ohta, T.2
Tsujii, J.3
-
40
-
-
84862284174
-
A Re-examination of Dependency Path Kernels for Relation Extraction
-
Wang M A Re-examination of Dependency Path Kernels for Relation Extraction IJCNLP: 2008 2008.
-
(2008)
IJCNLP: 2008
-
-
Wang, M.1
-
42
-
-
8644285350
-
A critical review of caffeine withdrawal: Empirical validation of symptoms and signs, incidence, severity, and associated features
-
15448977
-
Juliano LM Griffiths RR A critical review of caffeine withdrawal: empirical validation of symptoms and signs, incidence, severity, and associated features Psychopharmacology (Berl) 2004, 176(1):1-29. 15448977
-
(2004)
Psychopharmacology (Berl)
, vol.176
, Issue.1
, pp. 1-29
-
-
Juliano, L.M.1
Griffiths, R.R.2
-
43
-
-
0034975262
-
EBV regulates c-MYC, apoptosis, and tumorigenicity in Burkitt's lymphoma
-
11443860
-
Ruf IK Rhyne PW Yang H Borza CM Hutt-Fletcher LM Cleveland JL Sample JT EBV regulates c-MYC, apoptosis, and tumorigenicity in Burkitt's lymphoma Curr Top Microbiol Immunol 2001, 258:153-160. 11443860
-
(2001)
Curr Top Microbiol Immunol
, vol.258
, pp. 153-160
-
-
Ruf, I.K.1
Rhyne, P.W.2
Yang, H.3
Borza, C.M.4
Hutt-Fletcher, L.M.5
Cleveland, J.L.6
Sample, J.T.7
-
44
-
-
40349100410
-
c-Myc inhibits Ras-mediated differentiation of pheochromocytoma cells by blocking c-Jun up-regulation
-
18314492
-
Vaque JP Fernandez-Garcia B Garcia-Sanz P Ferrandiz N Bretones G Calvo F Crespo P Marin MC Leon J c-Myc inhibits Ras-mediated differentiation of pheochromocytoma cells by blocking c-Jun up-regulation Mol Cancer Res 2008, 6(2):325-339. 18314492
-
(2008)
Mol Cancer Res
, vol.6
, Issue.2
, pp. 325-339
-
-
Vaque, J.P.1
Fernandez-Garcia, B.2
Garcia-Sanz, P.3
Ferrandiz, N.4
Bretones, G.5
Calvo, F.6
Crespo, P.7
Marin, M.C.8
Leon, J.9
|