Multiplexed spectral coding for simultaneous detection of DNA hybridization reactions based on FRET

Sensors and Actuators, B: Chemical

Volumn 134, Issue 1, 2008, Pages 146-157

  Giestas, Letícia ^a   Ferreira, Guilherme N M ^b   Baptista, Pedro V ^a   Lima, João Carlos ^a  

^a UNIVERSIDADE NOVA DE LISBOA   (Portugal)

^b UNIVERSITY OF ALGARVE   (Portugal)

Author keywords

DNA hybridization; FRET; Optical multiplexing; Spectral coding

Indexed keywords

BIOASSAY; BIOCHIPS; DNA; ENERGY TRANSFER; FLUORESCENCE; GENES; LIGHT EMISSION; LUMINESCENCE; MICROARRAYS; NUCLEIC ACIDS; NUCLEOTIDES; OLIGONUCLEOTIDES; ORGANIC ACIDS; PROGRAMMING THEORY;

DNA CHIPS; DNA HYBRIDIZATION; DNA HYBRIDIZATIONS; DONOR MOLECULES; FLUORESCENCE-RESONANCE ENERGY TRANSFER; FRET; MOLECULAR LEVELS; OPTICAL MULTIPLEXING; SIMULTANEOUS DETECTION; SPECTRAL CODING;

TARGETS;

EID: 49549083488     PISSN: 09254005     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.snb.2008.04.038     Document Type: Article

References (14)

1. Clapp A.R., Medintz L., Mauro M., Fisher B.R., Bawendi M.G., and Mattoussi H. Fluorescence resonance energy transfer between quantum dot donors and dye-labeled protein acceptors. J. Am. Chem. Soc. 126 (2003) 301-310
2. Fulton R.J., McDade R.L., Smith P.L., Kienker L.J., and Kettman Jr. J.R. Advanced multiplexed analysis with the FlowMetrix (TM) system. Clin. Chem. 43 (1997) 1749-1756
3. Ju J., et al. Design and synthesis of fluorescence energy transfer dye-labeled primers and their application for DNA sequencing and analysis. Anal. Biochem. 231 (1995) 131-140
4. Liu J., and Lu Y. Multi-fluorophore fluorescence resonance energy transfer for probing nucleic acids structure and folding. Methods Mol. Biol. 335 (2006) 257-271
5. Clegg R.M., Murchie A.I.H., Zechel A., and Lilley D.M.J. Observing the helical geometry of double-stranded DNA in solution by fluorescence resonance energy transfer. Proc. Natl. Acad. Sci. U.S.A. 90 (1993) 2994-2998
6. Steemers F.J., Ferguson J.A., and Walt D.R. Screening unlabeled DNA targets with randomly ordered fiber-optic gene arrays. Nat. Biotechnol. 18 (2000) 91-94
7. Han M., Gao X., Su J.Z., and Nie S. Quantum-dot-tagged microbeads for multiplexed optical coding of biomolecules. Nat. Biotechnol. 19 (2001) 631-635
8. Melton L. On the trail of SNPs. Nature 422 (2003) 917-923
9. Tyagi S., and Kramer F.R. Molecular beacons: probes that fluoresce upon hybridization. Nat. Biotechnol. 14 (1996) 303-308
10. Kostrikis L.G., Tyagi S., Mhlanga M.M., Ho D.D., and Kramer F.R. Spectral genotyping of human alleles. Science 279 (1998) 1228-1229
11. Lakowicz J.R. Principles of Fluorescence Spectroscopy. second ed. (1999), Kluwer Academic/Plenum, New York, USA
12. Van Der Meer B.W., Coker G.I., and Simon Chen S.-Y. Resonance Energy Transfer: Theory and Data (1994), VCH, New York, USA
13. Wu P., and Brand L. Resonance energy transfer: methods and applications. Anal. Biochem. 218 (1994) 1-13
14. Clegg R.M. Fluorescence resonance energy transfer. Curr. Opin. Biotechnol. 6 (1995) 103-110