메뉴 건너뛰기




Volumn 404, Issue 1-2, 2008, Pages 156-169

On the decidability and complexity of the structural congruence for beta-binders

Author keywords

Complexity; Decidability; Process calculi; Structural congruence

Indexed keywords

BINDERS; BIOLOGICAL SYSTEMS; BIOMINERALIZATION; CHLORINE COMPOUNDS; DIFFERENTIATION (CALCULUS); INFORMATION THEORY; MATHEMATICAL TECHNIQUES;

EID: 49249124580     PISSN: 03043975     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.tcs.2008.04.007     Document Type: Article
Times cited : (6)

References (30)
  • 1
    • 34250874478 scopus 로고    scopus 로고
    • The decidability of the structural congruence for beta-binders
    • Priami C., and Romanel A. The decidability of the structural congruence for beta-binders. Electron. Notes Theor. Comput. Sci. 171 2 (2007) 155-170
    • (2007) Electron. Notes Theor. Comput. Sci. , vol.171 , Issue.2 , pp. 155-170
    • Priami, C.1    Romanel, A.2
  • 2
    • 0037179670 scopus 로고    scopus 로고
    • A. Regev, E. Shapiro, Cells as computation, Nature 419 (6905). http://dx.doi.org/10.1038/419343a
    • A. Regev, E. Shapiro, Cells as computation, Nature 419 (6905). http://dx.doi.org/10.1038/419343a
  • 4
    • 0018005391 scopus 로고
    • Communicating sequential processes
    • Hoare C. Communicating sequential processes. Commun. ACM 21 8 (1978) 666-677
    • (1978) Commun. ACM , vol.21 , Issue.8 , pp. 666-677
    • Hoare, C.1
  • 5
    • 0035888407 scopus 로고    scopus 로고
    • Application of a stochastic name-passing calculus to representation and simulation of molecular processes
    • Priami C., Regev A., Shapiro E., and Silvermann W. Application of a stochastic name-passing calculus to representation and simulation of molecular processes. Inform. Process. Lett. 80 1 (2001) 25-31
    • (2001) Inform. Process. Lett. , vol.80 , Issue.1 , pp. 25-31
    • Priami, C.1    Regev, A.2    Shapiro, E.3    Silvermann, W.4
  • 7
    • 26444592298 scopus 로고    scopus 로고
    • Brane calculi
    • Computational Methods in Systems Biology
    • Cardelli L. Brane calculi. Computational Methods in Systems Biology. LNCS vol. 3082 (2005) 257-278
    • (2005) LNCS , vol.3082 , pp. 257-278
    • Cardelli, L.1
  • 8
    • 26444448026 scopus 로고    scopus 로고
    • Beta binders for biological interactions
    • Proc. of Computational Methods in Systems Biology
    • Priami C., and Quaglia P. Beta binders for biological interactions. Proc. of Computational Methods in Systems Biology. LNCS vol. 3082 (2005) 20-33
    • (2005) LNCS , vol.3082 , pp. 20-33
    • Priami, C.1    Quaglia, P.2
  • 9
    • 33645429016 scopus 로고
    • Exact stochastic simulation of coupled chemical reactions
    • Gillespie D. Exact stochastic simulation of coupled chemical reactions. J. Phys. Chem. 81 25 (1977) 2340-2361
    • (1977) J. Phys. Chem. , vol.81 , Issue.25 , pp. 2340-2361
    • Gillespie, D.1
  • 10
    • 0017030517 scopus 로고
    • A general method for numerically simulating the stochastic time evolution of coupled chemical reactions
    • Gillespie D. A general method for numerically simulating the stochastic time evolution of coupled chemical reactions. J. Phys. Chem. 22 (1976) 403-434
    • (1976) J. Phys. Chem. , vol.22 , pp. 403-434
    • Gillespie, D.1
  • 12
    • 49249104853 scopus 로고    scopus 로고
    • A. Romanel, A stochastic abstract machine for beta-binders, Master's thesis, 2006
    • A. Romanel, A stochastic abstract machine for beta-binders, Master's thesis, 2006
  • 13
    • 34250902157 scopus 로고    scopus 로고
    • Operational patterns in Beta-binders
    • Priami C., and Quaglia P. Operational patterns in Beta-binders. T. Comp. Sys. Biology 1 (2005) 50-65
    • (2005) T. Comp. Sys. Biology , vol.1 , pp. 50-65
    • Priami, C.1    Quaglia, P.2
  • 15
    • 49249120032 scopus 로고    scopus 로고
    • J. Engelfriet, T. Gelsema, The decidability of structural congruence for replication restricted pi-calculus processes, Tech. Rep. 04-07, Leiden Institute of Advanced Computer Science, Leiden University, The Nederlands, 2004
    • J. Engelfriet, T. Gelsema, The decidability of structural congruence for replication restricted pi-calculus processes, Tech. Rep. 04-07, Leiden Institute of Advanced Computer Science, Leiden University, The Nederlands, 2004
  • 16
    • 0030574543 scopus 로고    scopus 로고
    • A multiset semantics for the pi-calculus with replication
    • Engelfriet J. A multiset semantics for the pi-calculus with replication. Theoret. Comput. Sci. 153 1-2 (1996) 65-94
    • (1996) Theoret. Comput. Sci. , vol.153 , Issue.1-2 , pp. 65-94
    • Engelfriet, J.1
  • 17
    • 0004526320 scopus 로고    scopus 로고
    • Multisets and structural congruence of the pi-calculus with replication
    • Engelfriet J., and Gelsema T. Multisets and structural congruence of the pi-calculus with replication. Theoret. Comput. Sci. 211 1-2 (1999) 311-337
    • (1999) Theoret. Comput. Sci. , vol.211 , Issue.1-2 , pp. 311-337
    • Engelfriet, J.1    Gelsema, T.2
  • 18
    • 49249102600 scopus 로고    scopus 로고
    • J. Engelfriet, T. Gelsema, Structural congruence in the pi-calculus with potential replication, Tech. Rep. 00-02, Leiden Institute of Advanced Computer Science, Leiden University, The Nederlands, 2000
    • J. Engelfriet, T. Gelsema, Structural congruence in the pi-calculus with potential replication, Tech. Rep. 00-02, Leiden Institute of Advanced Computer Science, Leiden University, The Nederlands, 2000
  • 19
    • 21144442838 scopus 로고    scopus 로고
    • A new natural structural congruence in the pi-calculus with replication
    • Engelfriet J., and Gelsema T. A new natural structural congruence in the pi-calculus with replication. Acta Inform. 40 6-7 (2004) 385-430
    • (2004) Acta Inform. , vol.40 , Issue.6-7 , pp. 385-430
    • Engelfriet, J.1    Gelsema, T.2
  • 20
    • 49249136179 scopus 로고    scopus 로고
    • R. Milner, The polyadic pi-calculus: A tutorial, Tech. Rep. ECSLFCS-91-180, Computer Science Department, University of Edinburgh, UK, 1991
    • R. Milner, The polyadic pi-calculus: A tutorial, Tech. Rep. ECSLFCS-91-180, Computer Science Department, University of Edinburgh, UK, 1991
  • 22
    • 49249115310 scopus 로고    scopus 로고
    • K. Booth, C. Colbourn, Problems polynomially equivalent to graph isomorphism, Tech. Rep. CS-77-04, Department of Computer Science, University of Waterloo, Ontario, Canada, 1977
    • K. Booth, C. Colbourn, Problems polynomially equivalent to graph isomorphism, Tech. Rep. CS-77-04, Department of Computer Science, University of Waterloo, Ontario, Canada, 1977
  • 23
    • 0013260541 scopus 로고
    • Lambda calculus notation with nameless dummies, a tool for automatic formula manipulation
    • de Bruijn N. Lambda calculus notation with nameless dummies, a tool for automatic formula manipulation. Indag. Math. 34 (1972) 381-392
    • (1972) Indag. Math. , vol.34 , pp. 381-392
    • de Bruijn, N.1
  • 24
    • 84870171606 scopus 로고    scopus 로고
    • L. Dematté, C. Priami, A. Romanel, BetaWB: Modelling and simulating biological processes, in: 2007 Summer Simulation Multiconference, 2007, pp. 777-784
    • L. Dematté, C. Priami, A. Romanel, BetaWB: Modelling and simulating biological processes, in: 2007 Summer Simulation Multiconference, 2007, pp. 777-784
  • 25
    • 0001144902 scopus 로고    scopus 로고
    • Efficient exact stochastic simulation of chemical systems with many species and many channels
    • Gibson M., and Bruck J. Efficient exact stochastic simulation of chemical systems with many species and many channels. J. Phys. Chem. 104 (2000) 1876-1889
    • (2000) J. Phys. Chem. , vol.104 , pp. 1876-1889
    • Gibson, M.1    Bruck, J.2
  • 26
    • 0033595892 scopus 로고    scopus 로고
    • The Rel/NF-κB signal transduction pathway: Introduction
    • Gilmore T. The Rel/NF-κB signal transduction pathway: Introduction. Oncogene 19 49 (1999) 6842-6844
    • (1999) Oncogene , vol.19 , Issue.49 , pp. 6842-6844
    • Gilmore, T.1
  • 27
    • 49249101522 scopus 로고    scopus 로고
    • A. Ihekwaba, R. Larcher, R. Mardare, C. Priami, Poster abstract: BetaWB - a language for modular representation of biological SYSTEMS, in: ICSB 2007: The Eighth International Conference on Systems Biology, 2007, pp. 61-62. http://www.icsb-2007.org/proceedings/index.html
    • A. Ihekwaba, R. Larcher, R. Mardare, C. Priami, Poster abstract: BetaWB - a language for modular representation of biological SYSTEMS, in: ICSB 2007: The Eighth International Conference on Systems Biology, 2007, pp. 61-62. http://www.icsb-2007.org/proceedings/index.html
  • 28
    • 0029790351 scopus 로고    scopus 로고
    • Ultrasensitivity in the mitogen-activated protein kinase cascade
    • Huang C., and Ferrell J. Ultrasensitivity in the mitogen-activated protein kinase cascade. Proc. Natl. Acad. Sci. USA 93 19 (1996) 10078-10083
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , Issue.19 , pp. 10078-10083
    • Huang, C.1    Ferrell, J.2
  • 29
    • 38149116233 scopus 로고    scopus 로고
    • L. Dematté, C. Priami, A. Romanel, O. Soyer, A formal and integrated framework to simulate evolution of biological pathways, in: CMSB, 2007, pp. 106-120
    • L. Dematté, C. Priami, A. Romanel, O. Soyer, A formal and integrated framework to simulate evolution of biological pathways, in: CMSB, 2007, pp. 106-120


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.