Comparative FISH mapping of two highly repetitive DNA sequences in Hordeum chilense (Roem. et Schult.)

Genome

Volumn 51, Issue 8, 2008, Pages 580-588

  Marin S ^a   Martin A ^a   Barro, F ^a  

^a INSTITUTO DE AGRICULTURA SOSTENIBLE   (Spain)

Author keywords

FISH; Hordeum chilense; pAs1; Polymorphism; pSc119.2; Tritordeum

Indexed keywords

ARTICLE; BARLEY; CHROMOSOME MAP; COMPARATIVE STUDY; FLUORESCENCE IN SITU HYBRIDIZATION; GENETICS; NUCLEOTIDE REPEAT; PLANT CHROMOSOME;

CHROMOSOME MAPPING; CHROMOSOMES, PLANT; HORDEUM; IN SITU HYBRIDIZATION, FLUORESCENCE; REPETITIVE SEQUENCES, NUCLEIC ACID;

AEGILOPS; ANISOLEPIS; HORDEUM; HORDEUM CHILENSE; HORDEUM VULGARE SUBSP. SPONTANEUM; X TRITORDEUM;

EID: 49249115390     PISSN: 08312796     EISSN: None     Source Type: Journal    
DOI: 10.1139/G08-044     Document Type: Article

References (39)

1. ch1 locus in Hordeum chilense. Theor. Appl. Genet. 102: 134-137. doi:10.1007/s001220051628.
2. Álvarez, J.B., Broccoli, A., and Martín, L.M. 2006. Variability and genetic diversity for gliadins in natural populations of Hordeum chilense Roem. et Schult. Genet. Resour. Crop Evol. 53: 1419-1425. doi:10.1007/s10722-005-5805-5.
3. Armstrong, K.C., Craig, I.L., and Merritt, C. 1987. Hordeum chilense (2n = 14) computer-assisted Giemsa karyotypes. Genome, 29: 683-688. doi:10.1139/g87-117.
4. Atienza, S.G., Ramírez, C.M., Hernández, P., and Martín, A. 2004. Chromosomal location of genes for carotenoid pigments in Hordeum chilense. Plant Breed. 123: 303-304. doi:10.1111/j.1439- 0523.2004.00918.x.
5. Atienza, S.G., Satovic, Z., Martín, A., and Martín, L.M. 2005. Genetic diversity in Hordeum chilense Roem. et Schult. germplasm collection as determined by endosperm storage proteins. Genet. Resour. Crop Evol. 52: 127-135. doi:10.1007/s10722-003-4433-1.
6. Atienza, S.G., Martín, A.C., and Martín, A. 2007. Introgression of wheat chromosome 2D or 5D into tritordeum leads to free-threshing habit. Genome, 50: 994-1000. doi:10.1139/G07-081. PMID:18059545.
7. Bedbrook, J.R., Jones, J., O'Dell, M., Thompson, R.D., and Flavell, R.B. 1980. A molecular description of telomeric heterochromatin in Secale species. Cell, 19: 545-560. doi:10.1016/0092-8674(80)90529-2. PMID:6244112.
8. Cabrera, A., Friebe, B., Jiang, J., and Gill, B.S. 1995. Characterization of Hordeum chilense chromosomes by C-banding and in situ hybridization using highly repeated DNA probes. Genome, 38: 435-442. doi:10.1139/g95-057. PMID:18470181.
9. Cabrera, A., Martín, A., and Barro, F. 2002. In-situ comparative mapping (ISCM) of Glu-1 loci in Triticum and Hordeum. Chromosome Res. 10: 49-54. doi:10.1023/A:1014270227360. PMID:11863070.
10. Castro, A.M., Martín, L.M., and Dixon, A.F.G. 1995. Genetic variability in antibiotic resistance to the greenbug Shizaphis graminum in Hordeum chilense. Plant Breed. 114: 510-514. doi:10.1111/j.1439-0523.1995.tb00846.x.
11. Clement, S.L., and Lester, D.G. 1990. Screening wild Hordeum species for resistance to Russian wheat aphid. Cereal Res. Commun. 18: 173-177.
12. Contento, A., Heslop-Harrison, J.S., and Schwarzacher, T. 2005. Diversity of a major repetitive DNA sequence in diploid and polyploid Triticeae. Cytogenet. Genome Res. 109: 34-42. doi:10.1159/000082379. PMID:15753556.
13. Cuadrado, A., and Jouve, N. 1994. Mapping and organization of highly-repeated DNA sequences by means of simultaneous and sequential FISH and C-banding in 6x-triticale. Chromosome Res. 2: 331-338. doi:10.1007/BF01552727. PMID:7921649.
14. Cuadrado, A., and Jouve, N. 1997. Distribution of highly repeated DNA sequences in species of the genus Secale. Genome, 40: 309-317. doi:10.1139/g97-043. PMID:9202411.
15. de Bustos, A., Cuadrado, A., Soler, C., and Jouve, N. 1996. Physical mapping of repetitive DNA sequences and 5S and 18S-26S rDNA in five wild species of the genus Hordeum. Chromosome Res. 4: 491-499. doi:10.1007/BF02261776. PMID:8939360.
16. Forster, B.P., Phillips, M.S., Miller, T.E., Baird, E., and Powell, W. 1990. Chromosome location of genes controlling tolerance to salt (NaCl) and vigour in Hordeum vulgare and H. chilense. Heredity, 65: 99-107. doi:10.1038/hdy.1990.75.
17. Gallardo, M., and Fereres, E. 1989. Resistencia a la sequía del tritórdeo (Hordeum chilense x Triticum turgidum) en relación a la del trigo, cebada y triticale. Investig. Agrar. Prod. Veg. 4: 361-375.
18. Giménez, M.J., Cosío, F., Martínez, C., Silva, F., Zuleta, A., and Martín, L.M. 1997. Collecting Hordeum chilense Roem. et Schult. germplasm in desert and steppe dominions of Chile. Plant Genet. Resour. Newsl. 109: 17-19.
19. Hagras, A.A.A., Kishii, M., Tanaka, H., Sato, K., and Tsujimoto, H. 2005. Genomic differentiation of Hordeum chilense from H. vulgare as revealed by repetitive and EST sequences. Genes Genet. Syst. 80: 147-159. doi:10.1266/ggs.80.147. PMID:16172528.
20. Martín, A., and Sánchez-Monge Laguna, E. 1980. A hybrid between Hordeum chilense and Triticum turgidum. Cereal Res. Commun. 8: 349-353.
21. Martín, A., Álvarez, J.B., Martín, L.M., Barro, F., and Ballesteros, J. 1999. The development of tritordeum: a novel cereal for food processing. J. Cereal Sci. 30: 85-95. doi:10.1006/jcrs.1998.0235.
22. Martín, A., Cabrera, A., Hernández, P., Ramírez, M.C., Rubiales, D., and Ballesteros, J. 2000. Prospect for the use of Hordeum chilense in durum wheat breeding, In Durum wheat improvement in the Mediterranean region: new challenges. Edited by C. Royo, M.M. Nachit, N. di Fonzo, and J.L. Araus. Vol. 40. IAMZ, Zaragoza, Spain. pp. 111-115.
23. McIntyre, C.L., Pereira, S., Moran, L.B., and Appels, R. 1990. New Secale cereale (rye) DNA derivatives for the detection of rye chromosome segments in wheat. Genome, 33: 635-640. doi:10.1139/g90-094. PMID:2262137.
24. Mukai, Y., Nakahara, Y., and Yamamoto, M. 1993. Simultaneous discrimination of the three genomes in hexaploid wheat by multicolor fluorescence in situ hybridization using total genomic and highly repeated DNA probes. Genome, 36: 489-494. doi:10.1139/g93-067. PMID:18470003.
25. Prieto, P., Martín, A., and Cabrera, A. 2004. Chromosomal distribution of telomeric and telomeric-associated sequences in Hordeum chilense by in situ hybridization. Hereditas, 141: 122-127. doi:10.1111/j.1601-5223.2004.01825.x. PMID:15660972.
26. Rayburn, A.L., and Gill, B.S. 1986a. Isolation of a D-genome specific repeated DNA sequence from Aegilops squarrosa. Plant Mol. Biol. Rep. 4: 102-109. doi:10.1007/BF02732107.
27. Rayburn, A.L., and Gill, B.S. 1986b. Molecular identification of the D-genome of wheat. J. Hered. 77: 253-255.
28. Rubiales, D., Ballesteros, J., and Martín, A. 1992. Resistance to Septoria tritici in Hordeum chilense and Triticum spp. amphiploids. Plant Breed. 109: 281-286. doi:10.1111/j.1439-0523.1992. tb00186.x.
29. Rubiales, D., Brown, J.K.M., and Martín, A. 1993. Hordeum chilense resistance to powdery mildew and its potential use in cereal breeding. Euphytica, 67: 215-220. doi:10.1007/BF00040623.
30. Rubiales, D., Ramírez, M.C., and Martín, A. 1996a. Resistance to common bunt in Hordeum chilense x Triticum spp. amphiploids. Plant Breed. 115: 416-418. doi:10.1111/j.1439-0523.1996. tb00945.x.
31. Rubiales, D., Snijders, C.H.A., Nicholson, P., and Martín, A. 1996b. Reaction of tritordeum to Fusarium culmorum and Septoria nodorum. Euphytica, 88: 165-174. doi:10.1007/BF00023887.
32. Schneider, A., Linc, G., and Molnár-Láng, M. 2003. Fluorescence in situ hybridization polymorphism using two repetitive DNA clones in different cultivars of wheat. Plant Breed. 122: 396-400. doi:10.1046/j.1439-0523.2003.00891.x.
33. Schwarzacher, T., and Heslop-Harrison, J.S. 2000. Practical in situ hybridization. BIOS Scientific Publishers, Oxford.
34. Taketa, S., Ando, H., Takeda, K., Harrison, G.E., and Heslop-Harrison, J.S. 2000. The distribution, organization and evolution of two abundant and widespread repetitive DNA sequences in the genus Hordeum. Theor. Appl. Genet. 100: 169-176. doi:10.1007/s001220050023.
35. Tobes, N., Ballesteros, J., Martínez, C., Lovazzano, G., Contreras, D., Cosio, F., et al. 1995. Collection mission of Hordeum chilense Roem et Schult in Chile and Argentina - report of a collecting mission. Genet. Resour. Crop Evol. 42: 211-216. doi:10.1007/BF02431254.
36. Vaz Patto, M.C., Aardse, A., Buntjer, J., Rubiales, D., Martín, A., and Niks, R.E. 2001. Morphology and AFLP markers suggest three Hordeum chilense ecotypes that differ in avoidance to rust fungi. Can. J. Bot. 79: 204-213. doi:10.1139/cjb-79-2-204.
37. Vershinin, A., Svitashev, S., Gummesson, P.-O., Salomon, B., von Bothmer, R., and Bryngelsson, T. 1994. Characterization of a family of tandemly repeated DNA sequences in Triticeae. Theor. Appl. Genet. 89: 217-225. doi:10.1007/BF00225145.
38. von Bothmer, R., and Jacobsen, N. 1986. Interspecific crosses in Hordeum (Poaceae). Plant Syst. Evol. 153: 49-64. doi:10.1007/BF00989417.
39. von Bothmer, R., Giles, B.R., and Nicora, E. 1980. Revision of Hordeum sect. Anisolepis Nevski. Bot. Not. 133: 539-554.