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Volumn 422, Issue 1-2, 2008, Pages 37-40

Metadynamic sampling of the free-energy landscapes of proteins coupled with a Monte Carlo algorithm

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN SH3; STEROID RECEPTOR COACTIVATOR 1;

EID: 49049118236     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.gene.2008.06.003     Document Type: Article
Times cited : (5)

References (13)
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  • 2
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    • (1975) Int. J. Pept. Protein Res. , vol.7 , Issue.4 , pp. 313-323
    • Go, N.1
  • 3
    • 0031444104 scopus 로고    scopus 로고
    • Folding dynamics of the Src SH3 domain
    • Grantcharova V., and Baker D. Folding dynamics of the Src SH3 domain. Biochemistry 36 50 (1997) 15685-15692
    • (1997) Biochemistry , vol.36 , Issue.50 , pp. 15685-15692
    • Grantcharova, V.1    Baker, D.2
  • 4
    • 0031853167 scopus 로고    scopus 로고
    • Important role of hydrogen bonds in the structurally polarized transition state for folding of the Src SH3 domain
    • Grantcharova V.P., Riddle D.S., Santiago J.V., and Baker D. Important role of hydrogen bonds in the structurally polarized transition state for folding of the Src SH3 domain. Nat. Struct. Mol. Biol. 5 (1998) 714-720
    • (1998) Nat. Struct. Mol. Biol. , vol.5 , pp. 714-720
    • Grantcharova, V.P.1    Riddle, D.S.2    Santiago, J.V.3    Baker, D.4
  • 5
    • 0037117638 scopus 로고    scopus 로고
    • A structure-based method for derivation of all-atom potentials for protein folding
    • Kussell E.L., Shimada J., and Shakhnovich E.I. A structure-based method for derivation of all-atom potentials for protein folding. Proc. Natl. Acad. Sci. 99 8 (2002) 5343-5348
    • (2002) Proc. Natl. Acad. Sci. , vol.99 , Issue.8 , pp. 5343-5348
    • Kussell, E.L.1    Shimada, J.2    Shakhnovich, E.I.3
  • 8
    • 33745955275 scopus 로고
    • The Monte Carlo method
    • Metropolis N., and Ulam S. The Monte Carlo method. J. Am. Stat. Assoc. 44 247 (1949) 335-341
    • (1949) J. Am. Stat. Assoc. , vol.44 , Issue.247 , pp. 335-341
    • Metropolis, N.1    Ulam, S.2
  • 9
    • 5744249209 scopus 로고
    • Equation of state calculations by fast computing machines
    • Metropolis N., Rosenbluth A.W., Teller M.N., and Teller E. Equation of state calculations by fast computing machines. J. Chem. Phys. 21 6 (1953) 1087-1092
    • (1953) J. Chem. Phys. , vol.21 , Issue.6 , pp. 1087-1092
    • Metropolis, N.1    Rosenbluth, A.W.2    Teller, M.N.3    Teller, E.4
  • 11
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    • The ensemble folding kinetics of protein g from an all-atom Monte Carlo simulation
    • Shimada J., and Shakhnovich E.I. The ensemble folding kinetics of protein g from an all-atom Monte Carlo simulation. Proc. Natl. Acad. Sci. 99 17 (2002) 11175-11180
    • (2002) Proc. Natl. Acad. Sci. , vol.99 , Issue.17 , pp. 11175-11180
    • Shimada, J.1    Shakhnovich, E.I.2
  • 12
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    • The folding thermodynamics and kinetics of crambin using an all-atom Monte Carlo simulation
    • Shimada J., Kussell E.L., and Shakhnovich E.I. The folding thermodynamics and kinetics of crambin using an all-atom Monte Carlo simulation. J. Mol. Biol. 308 1 (2001) 79-95
    • (2001) J. Mol. Biol. , vol.308 , Issue.1 , pp. 79-95
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  • 13
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    • Prediction and structural characterization of an independently folding substructure in the Src SH3 domain
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* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.