RDRio Mycobacterium tuberculosis infection is associated with a higher frequency of cavitary pulmonary disease

Journal of Clinical Microbiology

Volumn 46, Issue 7, 2008, Pages 2175-2183

  Lazzarini, Luiz Claudio Oliveira ^a,b   Spindola, Silvana Miranda ^c   Bang, Heejung ^a   Gibson, Andrea L ^a   Weisenberg, Scott ^a   Carvalho, Wania Da Silva ^c   Augusto, Claudio José ^d   Huard, Richard C ^a,e   Kritski, Afrânio L ^b   Ho, John L ^a  

^a WEILL CORNELL MEDICAL COLLEGE   (United States)

^b FEDERAL UNIVERSITY OF RIO DE JANEIRO   (Brazil)

^c FEDERAL UNIVERSITY OF MINAS GERAIS   (Brazil)

^d FUNDAÇÃO EZEQUIEL DIAS   (Brazil)

^e NewYork Presbyterian Hospital   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANTIBIOTIC SENSITIVITY; ARTICLE; BACTERIAL STRAIN; BACTERIUM CULTURE; BRAZIL; CENTRAL AMERICA; COHORT ANALYSIS; DISEASE SEVERITY; DISEASE TRANSMISSION; ETHNICITY; GENOTYPE; HUMAN; LUNG TUBERCULOSIS; MAJOR CLINICAL STUDY; MULTIDRUG RESISTANCE; MYCOBACTERIUM TUBERCULOSIS; NONHUMAN; PRIORITY JOURNAL; QUESTIONNAIRE; SOUTH AMERICA; SOUTHERN EUROPE; SPUTUM; ADULT; BACTERIUM IDENTIFICATION; CLASSIFICATION; DNA FINGERPRINTING; FEMALE; GENETICS; ISOLATION AND PURIFICATION; LUNG; MALE; MICROBIOLOGY; MIDDLE AGED; PATHOLOGY; PATHOPHYSIOLOGY; THORAX RADIOGRAPHY; TUBERCULOSIS;

MYCOBACTERIUM TUBERCULOSIS;

BACTERIAL DNA;

ADULT; BACTERIAL TYPING TECHNIQUES; BRAZIL; DNA FINGERPRINTING; DNA, BACTERIAL; FEMALE; GENOTYPE; HUMANS; LUNG; MALE; MIDDLE AGED; MYCOBACTERIUM TUBERCULOSIS; QUESTIONNAIRES; RADIOGRAPHY, THORACIC; TUBERCULOSIS, MULTIDRUG-RESISTANT; TUBERCULOSIS, PULMONARY;

EID: 49049095981     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/JCM.00065-08     Document Type: Article

References (61)

1. Baker, L., T. Brown, M. C. Maiden, and F. Drobniewski. 2004. Silent nucleotide. polymorphisms and a phylogeny for Mycobacterium tuberculosis. Emerg. Infect. Dis. 10:1568-1577.
2. Barbosa, C., R. Noboa, L. Lazzarini, N. Boechat, J. Leung, A. Elias, P. Suffys, A. Kritski, J. R. Lapa e Silva, and J. L. Ho. 2007. Is the severity of tuberculosis different when patients are infected by strains of Mycobacterium tuberculosis belonging to diverse spoligotyping families? Am. J. Respir. Crit. Care Med. 175:A417.
3. Bifani, P. J., B. B. Plikaytis, V. Kapur, K. Stockbauer, X. Pan, M. L. Lutfey, S. L. Moghazeh, W. Eisner, T. M. Daniel, M. H. Kaplan, J. T. Crawford, J. M. Musser, and B. N. Kreiswirth. 1996. Origin and interstate spread of a New York City multidrug-resistant Mycobacterium tuberculosis clone family. JAMA 275:452-457.
4. Bifani, P. J., B. Mathema, N. E. Kurepina, and B. N. Kreiswirth. 2002. Global dissemination of the Mycobacterium tuberculosis W-Beijing family strains. Trends Microbiol. 10:45-52.
5. Blumberg, H. M., W. J. Burman, R. E. Chaisson, C. L. Daley, S. C. Etkind, L. N. Friedman, P. Fujiwara, M. Grzemska, P. C. Hopewell, M. D. Iseman, R. M. Jasmer, V. Koppaka, R. I. Menzies, R. J. O'Brien, R. R. Reves, L. B. Reichman, P. M. Simone, J. R. Starke, and A. A. Vernon. 2003. American Thoracic Society, Centers for Disease Control and Prevention, and the Infectious Diseases Society: treatment of tuberculosis. Am. J. Respir. Crit. Care Med. 167:603-662.
6. Brennan, M. J., and G. Delogu. 2002. The PE multigene family: a "molecular mantra" for mycobacteria. Trends Microbiol. 10:246-249.
7. Brosch, R., S. V. Gordon, M. Marmiesse, P. Brodin, C. Buchrieser, K. Eiglmeier, T. Garnier, C. Gutierrez, G. Hewinson, K. Kremer, L. M. Parsons, A. S. Pym, S. Samper, D. van Soolingen, and S. T. Cole. 2002. A new evolutionary scenario for the Mycobacterium tuberculosis complex. Proc. Natl. Acad. Sci. USA 99:3684-3689.
8. Brudey, K., J. R. Driscoll, L. Rigouts, W. M. Prodinger, A. Gori, S. A. Al-Hajoj, C. Allix, L. Aristimuno, J. Arora, V. Baumanis, L. Binder, P. Cafrune, A. Cataldi, S. Cheong, R. Diel, C. Ellermeier, J. T. Evans, M. Fauville-Dufaux, S. Ferdinand, D. Garcia de Viedma, C. Garzelli, L. Gazzola, H. M. Gomes, M. C. Guttierez, P. M. Hawkey, P. D. van Helden, G. V. Kadival, B. N. Kreiswirth, K. Kremer, M. Kubin, S. P. Kulkarni, B. Liens, T. Lillebaek, M. L. Ho, C. Martin, C. Martin, I. Mokrousov, O. Narvskaia, Y. F. Ngeow, L. Naumann, S. Niemann, I. Parwati, Z. Rahim, V. Rasolofo-Razanamparany, T. Rasolonavalona, M. L. Rossetti, S. Rusch-Gerdes, A. Sajduda, S. Samper, I. G. Shemyakin, U. B. Singh, A. Somoskovi, R. A. Skuce, D. van Soolingen, E. M. Streicher, P. N. Suffys, E. Tortoli, T. Tracevska, V. Vincent, T. C. Victor, R. M. Warren, S. F. Yap, K. Zaman, F. Portaels, N. Rastogi, and C. Sola. 2006. Mycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligotyping database (SpolDB4) for classification, population genetics and epidemiology. BMC Microbiol. 6:23.
9. Candia, N., B. Lopez, T. Zozio, M. Carrivale, C. Diaz, G. Russomando, N. J. de Romero, J. C. Jara, L. Barrera, N. Rastogi, and V. Ritacco. 2007. First insight into Mycobacterium tuberculosis genetic diversity in Paraguay. BMC Microbiol. 7:75.
10. Canetti, G. 1965. The J. Burns Amberson Lecture: present aspects of bacterial resistance in tuberculosis. Am. Rev. Respir. Dis. 92:687-703.
11. Canetti, G., N. Rist, and J. Grosset. 1963. Measurement of sensitivity of the tuberculous bacillus to antibacillary drugs by the method of proportions: methodology, resistance criteria, results, and interpretation. Rev. Tuberc. Pneumol. 27:217-272.
12. Centers for Disease Control and Prevention. 1993. Outbreak of multidrug-resistant tuberculosis at a hospital-New York City, 1991. MMWR Morb. Mortal. Wkly. Rep. 42:427-433.
13. Centers for Disease Control and Prevention. 1995. Exposure of passengers and flight crew to Mycobacterium tuberculosis on commercial aircraft, 1992-1995. MMWR Morb. Mortal. Wkly. Rep. 44:137-140.
14. Chihota, V., L. Apers, S. Mungofa, W. Kasongo, I. M. Nyoni, R. Tembwe, G. Mbulo, M. Tembo, E. M. Streicher, G. D. van der Spuy, T. C. Victor, P. van Helden, and R. M. Warren. 2007. Predominance of a single genotype of Mycobacterium tuberculosis in regions of Southern Africa. Int. J. Tuberc. Lung Dis. 11:311-318.
15. Cole, S. T., R. Brosch, J. Parkhill, T. Garnier, C. Churcher, D. Harris, S. V. Gordon, K. Eiglmeier, S. Gas, C. E. Barry III, F. Tekaia, K. Badcock, D. Basham, D. Brown, T. Chillingworth, R. Connor, R. Davies, K. Devlin, T. Feltwell, S. Gentiles, N. Hamlin, S. Holroyd, T. Hornsby, K. Jegels, A. Krogh, J. McLean, S. Moule, L. Murphy, K. Oliver, J. Osborne, M. A. Quail, M. A. Rajandream, J. Rogers, S. Rutter, K. Seeger, J. Skelton, R. Squares, S. Squares, J. E. Sulston, K. Taylor, S. Whitehead, and B. G. Barrell. 1998. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Nature 393:537-544.
16. Corbett, E. L., C. J. Watt, N. Walker, D. Maher, B. G. Williams, M. C. Raviglione, and C. Dye. 2003. The growing burden of tuberculosis: global trends and interactions with the HIV epidemic. Arch. Intern. Med. 163:1009-1021.
17. Crawford, J. T. 2003. Genotyping in contact investigations: a CDC perspective. Int. J. Tuberc. Lung Dis. 7:S453-457.
18. Dale, J. W., G. H. Bothamley, F. Drobniewski, S. H. Gillespie, T. D. McHugh, and R. Pitman. 2005. Origins and properties of Mycobacterium tuberculosis isolates in London. J. Med. Microbiol. 54:575-582.
19. Das, S., S. Narayanan, L. Hari, N. S. Mohan, S. Somasundaram, N. Selvakumar, and P. R. Narayanan. 2004. Simultaneous infection with multiple strains of Mycobacterium tuberculosis identified by restriction fragment length polymorphism analysis. Int. J. Tuberc. Lung Dis. 8:267-270.
20. Driver, C. R., M. Macaraig, P. D. McElroy, C. Clark, S. S. Munsiff, B. N. Kreiswirth, J. Driscoll, and B. Zhao. 2006. Which patients' factors predict the rate of growth of Mycobacterium tuberculosis clusters in an urban community? Am. J. Epidemiol. 164:21-31.
21. Filliol, I., A. S. Motiwala, M. Cavatore, W. Qi, M. H. Hazbon, M. Bobadilla del Valle, J. Fyfe, L. Garcia-Garcia, N. Rastogi, C. Sola, T. Zozio, M. I. Guerrero, C. I. Leon, J. Crabtree, S. Angiuoli, K. D. Eisenach, R. Durmaz, M. L. Joloba, A. Rendon, J. Sifuentes-Osornio, A. Ponce de Leon, M. D. Cave, R. Fleischmann, T. S. Whittam, and D. Alland. 2006. Global phylogeny of Mycobacterium tuberculosis based on single nucleotide polymorphism (SNP) analysis: insights into tuberculosis evolution, phylogenetic accuracy of other DNA fingerprinting systems, and recommendations for a minimal standard SNP Set. J. Bacteriol. 188:759-772.
22. Friedman, C. R., G. C. Quinn, B. N. Kreiswirth, D. C. Perlman, N. Salomon, N. Schluger, M. Lutfey, J. Berger, N. Poltoratskaia, and L. W. Riley. 1997. Widespread dissemination of a drug-susceptible strain of Mycobacterium tuberculosis. J. Infect. Dis. 176:478-484.
23. Gagneux, S., K. DeRiemer, T. Van, M. Kato-Maeda, B. C. Jong, S. Narayanan, M. Nicol, S. Niemann, K. Kremer, M. C. Gutierrez, M. Hilty, P. C. Hopewell, and P. M. Small. 2006. Variable host-pathogen compatibility in Mycobacterium tuberculosis. Proc. Natl. Acad. Sci. USA 103:2869-2873.
24. Gagneux, S., and P. M. Small. 2007. Global phylogeography of Mycobacterium tuberculosis and implications for tuberculosis product development. Lancet Infect. Dis. 7:328-337.
25. García de Viedma, D., M. Marín, S. Hernangómez, M. Díaz, M. J. Ruiz Serrano, L. Alcalá, and E. Bouza. 2002. Tuberculosis recurrences: reinfection plays a role in a population whose clinical/epidemiological characteristics do not favor reinfection. Arch. Intern. Med. 162:1873-1879.
26. Garnier, T., K. Eiglmeier, J. C. Camus, N. Medina, H. Mansoor, M. Pryor, S. Duthoy, S. Grondin, C. Lacroix, C. Monsempe, S. Simon, B. Harris, R. Atkin, J. Doggett, R. Mayes, L. Keating, P. R. Wheeler, J. Parkhill, B. G. Barrell, S. T. Cole, S. V. Gordon, and R. G. Hewinson. 2003. The complete genome sequence of Mycobacterium bovis. Proc. Natl. Acad. Sci. USA 100:7877-7882.
27. Gibson, A. L., R. C. Huard, N. C. Gey van Pittius, L. C. O. Lazzarini, J. Driscoll, N. Kurepina, T. Zozio, C. Sola, S. M. Spindola, A. L. Kritski, D. Fitzgerald, K. Kremer, H. Mardassi, P. Chitale, J. Brinkworth, D. G. de Viedma, B. Gicquel, J. W. Pape, D. van Soolingen, B. N. Kreiswirth, R. M. Warren, P. D. van Helden, N. Rastogi, P. N. Suffys, J. Lapa e Silva, and J. L. Ho. 2008. Application of sensitive and specific molecular methods to uncover the global dissemination of the major RDRio sublineage of the Latin American-Mediterranean Mycobacterium tuberculosis spoligotype family. J. Clin. Microbiol. 46:1259-1267.
28. Gutacker, M. M., B. Mathema, H. Soini, E. Shashkina, B. N. Kreiswirth, E. A. Graviss, and J. M. Musser. 2006. Single-nucleotide polymorphism-based population genetic analysis of Mycobacterium tuberculosis strains from four geographic sites. J. Infect. Dis. 193:121-128.
29. Huard, R. C., M. Fabre, P. de Haas, L. C. Lazzarini, D. van Soolingen, D. Cousins, and J. L. Ho. 2006. Novel genetic polymorphisms that further delineate the phylogeny of the Mycobacterium tuberculosis complex. J. Bacteriol. 188:4271-4287.
30. Ignatova, A., S. Dubiley, V. Stepanshina, and I. Shemyakin. 2006. Predominance of multidrug-resistant LAM and Beijing family strains among Mycobacterium tuberculosis isolates recovered from prison inmates in Tula Region, Russia. J. Med. Microbiol. 55:1413-1418.
31. Kamerbeek, J., L. Schouls, A. Kolk, M. van Agterveld, D. van Soolingen, S. Kuijper, A. Bunschoten, H. Molhuizen, R. Shaw, M. Goyal, and J. van Embden. 1997. Simultaneous detection and strain differentiation of Mycobacterium tuberculosis for diagnosis and epidemiology. J. Clin. Microbiol. 35:907-914.
32. Kruuner, A., S. E. Hoffner, H. Sillastu, M. Danilovits, K. Levina, S. B. Svenson, S. Ghebremichael, T. Koivula, and G. Källenius. 2001. Spread of drug-resistant pulmonary tuberculosis in Estonia. J. Clin. Microbiol. 39:3339-3345.
33. Lazzarini, L. C., R. C. Huard, N. L. Boechat, H. M. Gomes, M. C. Oelemann, N. Kurepina, E. Shashkina, F. C. Mello, A. L. Gibson, M. J. Virginio, A. G. Marsico, W. R. Butler, B. N. Kreiswirth, P. N. Suffys, J. R. Lapa e Silva, and J. L. Ho. 2007. Discovery of a novel Mycobacterium tuberculosis lineage that is a major cause of tuberculosis in Rio de Janeiro, Brazil. J. Clin. Microbiol. 45:3891-3902.
34. Manca, C., M. B. Reed, S. Freeman, B. Mathema, B. N. Kreiswirth, C. E. Barry III, and G. Kaplan. 2004. Differential monocyte activation underlies strain-specific Mycobacterium tuberculosis pathogenesis. Infect. Immun. 72:5511-5514.
35. Martín, A., F. Chaves, J. Iñigo, M. Alonso, C. Sola, N. Rastogi, M. J. Ruiz Serrano, E. Palenque, E. Bouza, and D. Garcia de Viedma. 2007. Molecular, epidemiological, and infectivity characterization of a Mycobacterium tuberculosis strain prevalent in Madrid. Clin. Microbiol. Infect. 13:1210-1213.
36. Ministério da Saúde. 2007. Guia de mesa da tuberculose. Ministério da Saúde, Rio de Janeiro, Brazil. http://portal.saude.gov.br/portal/svs/visualizar_texto.cfm?idtxt=21514.
37. Ministério da Saúde. 2006. Sistema nacional de vigilância em saúde: relatório de situação: Minas Gerais. Ministério da Saúde, Rio de Janeiro, Brazil. http://portal.saude.gov.br/portal/arquivos/pdf/relatorio_snvs_mg_2ed.pdf.
38. Mostowy, S., D. Cousins, J. Brinkman, A. Aranaz, and M. A. Behr. 2002. Genomic deletions suggest a phylogeny for the Mycobacterium tuberculosis complex. J. Infect. Dis. 186:74-80.
39. Newton, S. M., R. J. Smith, K. A. Wilkinson, M. P. Nicol, N. J. Garton, K. J. Staples, G. R. Stewart, J. R. Wain, A. R. Martineau, S. Fandrich, T. Smallie, B. Foxwell, A. Al-Obaidi, J. Shafi, K. Rajakumar, B. Kampmann, P. W. Andrew, L. Ziegler-Heitbrock, M. R. Barer, and R. J. Wilkinson. 2006. A deletion defining a common Asian lineage of Mycobacterium tuberculosis associates with immune subversion. Proc. Natl. Acad. Sci. USA 103:15594-15598.
40. Niobe-Eyangoh, S. N., C. Kuaban, P. Sorlin, J. Thonnon, V. Vincent, and M. C. Gutierrez. 2004. Molecular characteristics of strains of the Cameroon family, the major group of Mycobacterium tuberculosis in a country with a high prevalence of tuberculosis. J. Clin. Microbiol. 42:5029-5035.
41. Nolte, F. S., and B. Metchock. 1995. Mycobacterium, p. 403-437. In P. R. Murray, F. J. Barron, M. A. Pfaller, F. C. Tenover, and R. I. Yolken (ed.), Manual of clinical microbiology, 6th ed. ASM Press, Washington, DC.
42. Palaci, M., R. Dietze, D. J. Hadad, F. K. Ribeiro, R. L. Peres, S. A. Vinhas, E. L. Maciel, V. do Valle Dettoni, L. Horter, W. H. Boom, J. L. Johnson, and K. D. Eisenach. 2007. Cavitary disease and quantitative sputum bacillary load in cases of pulmonary tuberculosis. J. Clin. Microbiol. 45:4064-4066.
43. Pillay, M., and A. W. Sturm. 2007. Evolution of the extensively drug-resistant F15/LAM4/KZN strain of Mycobacterium tuberculosis in KwaZulu-Natal, South Africa. Clin. Infect. Dis. 45:1409-1414.
44. Ramakrishnan, L., N. A. Federspiel, and S. Falkow. 2000. Granuloma-specific expression of Mycobacterium virulence proteins from the glycine-rich PE-PGRS family. Science 288:1436-1439.
45. Reed, M. B., P. Domenech, C. Manca, H. Su, A. K. Barczak, B. N. Kreiswirth, G. Kaplan, and C. E. Barry III. 2004. A glycolipid of hypervirulent tuberculosis strains that inhibits the innate immune response p84. Nature 431:84-87.
46. Richardson, M., N. M. Carroll, E. Engelke, G. D. van der Spuy, F. Salker, Z. Munch, R. P. Gie, R. M. Warren, N. Beyers, and P. D. van Helden. 2002. Multiple Mycobacterium tuberculosis strains in early cultures from patients in a high-incidence community setting. J. Clin. Microbiol. 40:2750-2754.
47. Riley, L. W. 2006. Of mice, men, and elephants: Mycobacterium tuberculosis cell envelope lipids and pathogenesis. J. Clin. Investig. 116:1475-1478.
48. Shaw, J. B., and N. Wynn-Williams. 1954. Infectivity of pulmonary tuberculosis in relation to sputum status. Am. Rev. Tuberc. 69:724-732.
49. Shemyakin, I. G., V. N. Stepanshina, I. Y. Ivanov, M. Y. Lipin, V. A. Anisimova, A. G. Onasenko, O. V. Korobova, and T. M. Shinnick. 2004. Characterization of drug-resistant isolates of Mycobacterium tuberculosis derived from Russian inmates. Int. J. Tuberc. Lung Dis. 8:1194-1203.
50. Sreevatsan, S., X. Pan, K. E. Stockbauer, N. D. Connell, B. N. Kreiswirth, T. S. Whittam, and J. M. Musser. 1997. Restricted structural gene polymorphism in the Mycobacterium tuberculosis complex indicates evolutionarily recent global dissemination. Proc. Natl. Acad. Sci. USA 94:9869-9874.
51. Streicher, E. M., T. C. Victor, G. van der Spuy, C. Sola, N. Rastogi, P. D. van Helden, and R. M. Warren. 2007. Spoligotype signatures in the Mycobacterium tuberculosis complex. J. Clin. Microbiol. 45:237-240.
52. Sun, Y. J., T. K. Lim, A. K. Ong, B. C. Ho, G. T. Seah, and N. I. Paton. 2006. Tuberculosis associated with Mycobacterium tuberculosis Beijing and non-Beijing genotypes: a clinical and immunological comparison. BMC Infect. Dis. 6:105.
53. Supply, P., S. Lesjean, E. Savine, K. Kremer, D. van Soolingen, and C. Locht. 2001. Automated high-throughput genotyping for study of global epidemiology of Mycobacterium tuberculosis based on mycobacterial interspersed repetitive units. J. Clin. Microbiol. 39:3563-3571.
54. Talaat, A. M., R. Lyons, S. T. Howard, and S. A. Johnston. 2004. The temporal expression profile of Mycobacterium tuberculosis infection in mice. Proc. Natl. Acad. Sci. USA 101:4602-4607.
55. Valway, S. E., M. P. Sanchez, T. F. Shinnick, I. Orme, T. Agerton, D. Hoy, J. S. Jones, H. Westmoreland, and I. M. Onorato. 1998. An outbreak involving extensive transmission of a virulent strain of Mycobacterium tuberculosis. N. Engl. J. Med. 338:633-639.
56. van Crevel, R., R. H. Nelwan, W. de Lenne, Y. Veeraragu, A. G. van der Zanden, Z. Amin, J. W. van der Meer, and D. van Soolingen. 2001. Mycobacterium tuberculosis Beijing genotype strains associated with febrile response to treatment. Emerg. Infect. Dis. 7:880-883.
57. Voskuil, M. I., D. Schnappinger, R. Rutherford, Y. Liu, and G. K. Schoolnik. 2004. Regulation of the Mycobacterium tuberculosis PE/PPE genes. Tuberculosis 84:256-262.
58. Reference deleted.
59. World Health Organization. 2007. Tuberculosis fact sheet no. 104. World Health Organization, Geneva, Switzerland. http://www.who.int/mediacentre/ factsheets/fs104/en/index.html.
60. World Health Organization. 2008. WHO global report WHO/HTM/TB/2008/393. World Health Organization, Geneva, Switzerland. http://www.who.int/tb/publications/global report/2008/pdf/bra.pdf.
61. Yeh, R. W., P. C. Hopewell, and C. L. Daley. 1999. Simultaneous infection with two strains of Mycobacterium tuberculosis identified by restriction fragment length polymorphism analysis. Int. J. Tuberc. Lung Dis. 3:537-539.