Dynamics of pattern formation in bacterial swarms

Physics of Fluids

Volumn 20, Issue 7, 2008, Pages

  Steager, Edward B ^a   Kim, Chang Beom ^a   Kim, Min Jun ^a  

^a Drexel University   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA;

AVERAGE VELOCITY; COLLECTIVE MOTIONS; CORRELATION LENGTHS; FLAGELLATED BACTERIA; PATTERN FORMATION; SERRATIA MARCESCENS; SHORT PERIODS; VELOCITY FIELD;

VELOCITY;

EID: 48849090727     PISSN: 10706631     EISSN: None     Source Type: Journal    
DOI: 10.1063/1.2953245     Document Type: Article

References (21)

1. H. C. Berg and R. A. Anderson, "Bacteria swim by rotating their flagellar filaments," Nature (London) NATUAS0028-083610.1038/ 245380a0 245, 380 (1973).
2. J. Henrichsen, "Bacterial surface translocation: A survey and a classification," Bacteriol. Rev. ZZZZZZ0005-3678 36, 478 (1972).
3. H. C. Berg, "The rotary motor of bacterial flagella," Annu. Rev. Biochem. ARBOAW0066-415410.1146/annurev.biochem.72.121801.161737 72, 19 (2003).
4. M. Matsushita, in Bacteria as Multicellular Organisms, edited by J. A. Shapiro and M. Dworkin (Oxford University Press, New York, 1997).
5. N. H. Mendelson, A. Bourque, K. Wilkening, K. R. Anderson, and J. C. Watkins, "Organized cell swimming motions in Bacillus subtilis colonies: Patterns of short-lived whirls and jets," J. Bacteriol. JOBAAY0021-9193 181, 600 (1999).
6. E. Ben-Jacob, I. Cohen, A. Czirok, T. Vicsek, and D. L. Gutnick, "Chemomodulation of cellular movement, collective formation of vortices by swarming bacteria, and colonial development," Physica A PHYADX0378-437110.1016/S0378-4371(96)00457-8 238, 181 (1997).
7. C. Dombrowski, L. Cisneros, S. Chatkaew, R. E. Goldstein, and J. O. Kessler, "Self-concentration and large-scale coherence in bacterial dynamics," Phys. Rev. Lett. PRLTAO0031-900710.1103/ PhysRevLett.93.098103 93, 098103 (2004).
8. J. P. Hernandez-Ortiz, C. G. Stolz, and M. D. Graham, "Transport and collective dynamics in suspensions of confined swimming particles," Phys. Rev. Lett. PRLTAO0031-900710.1103/ PhysRevLett.95.204501 95, 204501 (2005).
9. A. Sokolov, I. S. Aranson, J. O. Kessler, and R. E. Goldstein, "Concentration dependence of the collective dynamics of swimming bacteria," Phys. Rev. Lett. PRLTAO0031-900710.1103/ PhysRevLett.98.158102 98, 158102 (2007).
10. V. Narayan, S. Ramaswamy, and N. Menon, "Long-lived giant number fluctuations in a swarming granular nematic," Science SCIEAS0036-807510.1126/science.1140414 317, 105 (2007).
11. J. Starruss, F. Peruani, M. Bar, and A. Deutsch, in Mathematical Modeling of Biological Systems, edited by A. Deutsch, L. Brusch, H. Byrne, G. de Vries, and H. Herzel (Birkhauser, Boston, 2007).
12. L. H. Cisneros, R. Cortez, C. Dombrowski, R. E. Goldstein, and J. O. Kessler, "Fluid dynamics of self-propelled microorganisms, from individuals to concentrated populations," Exp. Fluids EXFLDU0723-486410.1007/s00348-007-0387-y 43, 737 (2007).
13. M. J. Kim and K. S. Breuer, "Microfluidic pump powered by self-organizing bacteria," Small SMALBC1613-681010.1002/ smll.200700641 4, 111 (2008).
14. E. Steager, C.-B. Kim, J. Patel, S. Bith, C. Naik, L. Reber, and M. J. Kim, "Control of microfabricated structures powered by flagellated bacteria using phototaxis," Appl. Phys. Lett. APPLAB0003-695110.1063/1.2752721 90, 263901 (2007).
15. S. Martel, C. C. Tremblay, S. Ngakeng, and G. Langlois, "Controlled manipulation and actuation of micro-objects with magnetotactic bacteria," Appl. Phys. Lett. APPLAB0003-695110.1063/1.2402221 89, 233904 (2006).
16. B. Behkem and M. Sitti, "Bacterial flagella-based propulsion on/off motion control of microscale objects," Appl. Phys. Lett. APPLAB0003-695110.1063/1.2431454 90, 023902 (2007).
17. N. Darnton, L. Turner, K. S. Breuer, and H. C. Berg, "Moving fluid with bacterial carpets," Biophys. J. BIOJAU0006-3495 86, 1863 (2004).
18. H. C. Berg and D. A. Brown, "Chemotaxis in Escherichia coli analysed by three-dimensional tracking," Nature (London) NATUAS0028-083610.1038/239500a0 239, 500 (1972).
19. M. J. Kim and K. S. Breuer, "Controlled mixing in microfluidic systems using bacterial chemotaxis," Anal. Chem. ANCHAM0003-270010.1021/ac0614691 79, 955 (2007).
20. L. Alberti and R. M. Harshey, "Differentiation of Serratia marcescens 274 into swimmer and swarmer cells," J. Bacteriol. JOBAAY0021-9193 172, 4322 (1990).
21. H. Li, T. Tanikawa, Y. Sato, Y. Nakagawa, and T. Matsuyama, "Serratia marcescens gene required for surfactant serrawetting W1 production encodes putative aminolipid synthetase belonging to nonrobosomal peptide synthetase family," Microbiol. Immunol. MIIMDV0385-5600 49, 303 (2005).