메뉴 건너뛰기




Volumn 26, Issue 3, 2008, Pages 255-262

Insertions-deletions in a microsatellite flanking region may be resolved by variation in stuttering patterns

Author keywords

Allele calling; Flanking region; Fragment length analysis; Nuclear microsatellite; Nucleotide substitutions; Simple sequence repeat; Size homoplasy; Stuttering pattern

Indexed keywords


EID: 48849089826     PISSN: 07359640     EISSN: 15729818     Source Type: Journal    
DOI: 10.1007/s11105-008-0034-7     Document Type: Article
Times cited : (10)

References (20)
  • 1
    • 4344678918 scopus 로고    scopus 로고
    • The impact of microsatellite electromorph size homoplasy on multilocus population structure estimates in a tropical tree (Corythophora alta) and an anadromous fish (Morone saxatilis)
    • 9
    • RI Adams KM Brown MB Hamilton 2004 The impact of microsatellite electromorph size homoplasy on multilocus population structure estimates in a tropical tree (Corythophora alta) and an anadromous fish (Morone saxatilis) Mol Ecol. 13 9 2579 2588
    • (2004) Mol Ecol. , vol.13 , pp. 2579-2588
    • Adams, R.I.1    Brown, K.M.2    Hamilton, M.B.3
  • 2
    • 0033594385 scopus 로고    scopus 로고
    • Microsatellite evolution: Polarity of substitutions within repeats and neutrality of flanking sequences
    • 1421
    • J Brohede H Ellegren 1999 Microsatellite evolution: polarity of substitutions within repeats and neutrality of flanking sequences Proc R Soc Lond B. 266 1421 825 833
    • (1999) Proc R Soc Lond B. , vol.266 , pp. 825-833
    • Brohede, J.1    Ellegren, H.2
  • 3
    • 18944369398 scopus 로고    scopus 로고
    • Comparative sequencing of a microsatellite locus reveals size homoplasy within and between European oak species (Quercus spp.)
    • 4
    • A-L Curtu R Finkeldey O Gailing 2004 Comparative sequencing of a microsatellite locus reveals size homoplasy within and between European oak species (Quercus spp.) Plant Mol Biol Reptr. 22 4 339 346
    • (2004) Plant Mol Biol Reptr. , vol.22 , pp. 339-346
    • Curtu, A.-L.1    Finkeldey, R.2    Gailing, O.3
  • 4
    • 3042782819 scopus 로고    scopus 로고
    • Microsatellites: Simple sequences with complex evolution
    • 6
    • H Ellegren 2004 Microsatellites: simple sequences with complex evolution Nat Rev Genet. 5 6 435 445
    • (2004) Nat Rev Genet. , vol.5 , pp. 435-445
    • Ellegren, H.1
  • 5
    • 0036718239 scopus 로고    scopus 로고
    • Homoplasy and mutation model at microsatellite loci and their consequences for population genetics analysis
    • 9
    • A Estoup P Jarne J-M Cornuet 2002 Homoplasy and mutation model at microsatellite loci and their consequences for population genetics analysis Mol Ecol. 11 9 1591 1604
    • (2002) Mol Ecol. , vol.11 , pp. 1591-1604
    • Estoup, A.1    Jarne, P.2    Cornuet, J.-M.3
  • 7
    • 3142694993 scopus 로고    scopus 로고
    • Cross-amplification and sequence variation of microsatellite loci in Eurasian hard pines
    • 1
    • SC González-Martínez JJ Robledo-Arnuncio C Collada 2004 Cross-amplification and sequence variation of microsatellite loci in Eurasian hard pines Theor Appl Genet. 109 1 103 111
    • (2004) Theor Appl Genet. , vol.109 , pp. 103-111
    • González-Martínez, S.C.1    Robledo-Arnuncio, J.J.2    Collada, C.3
  • 8
    • 34249940962 scopus 로고    scopus 로고
    • Coincidence of small-scale spatial discontinuities in leaf morphology and nuclear microsatellite variation of Quercus petraea and Q. robur in a mixed forest
    • 4
    • F Gugerli J-C Walser K Dounavi 2007 Coincidence of small-scale spatial discontinuities in leaf morphology and nuclear microsatellite variation of Quercus petraea and Q. robur in a mixed forest Ann Bot. 99 4 713 722
    • (2007) Ann Bot. , vol.99 , pp. 713-722
    • Gugerli, F.1    Walser, J.-C.2    Dounavi, K.3
  • 9
    • 13444282592 scopus 로고    scopus 로고
    • Microsatellite genotyping errors: Detection approaches, common sources and consequences for paternal exclusion
    • 2
    • JI Hoffman W Amos 2005 Microsatellite genotyping errors: detection approaches, common sources and consequences for paternal exclusion Mol Ecol. 14 2 599 612
    • (2005) Mol Ecol. , vol.14 , pp. 599-612
    • Hoffman, J.I.1    Amos, W.2
  • 10
    • 0032458261 scopus 로고    scopus 로고
    • Characterization of (GA)(n) microsatellite loci from Quercus robur
    • 2
    • S Kampfer C Lexer J Glössl 1998 Characterization of (GA)(n) microsatellite loci from Quercus robur Hereditas 129 2 183 186
    • (1998) Hereditas , vol.129 , pp. 183-186
    • Kampfer, S.1    Lexer, C.2    Glössl, J.3
  • 11
    • 0018191975 scopus 로고
    • Stepwise mutation model and distribution of allelic frequencies in a finite population
    • 6
    • M Kimura T Ohta 1978 Stepwise mutation model and distribution of allelic frequencies in a finite population Proc Natl Acad Sci U S A. 75 6 2868 2872
    • (1978) Proc Natl Acad Sci U S A. , vol.75 , pp. 2868-2872
    • Kimura, M.1    Ohta, T.2
  • 12
    • 33646594690 scopus 로고    scopus 로고
    • Shared alleles in sympatric oaks: Recurrent gene flow is a more parsimonious explanation than ancestral polymorphism
    • 7
    • C Lexer A Kremer RJ Petit 2006 Shared alleles in sympatric oaks: recurrent gene flow is a more parsimonious explanation than ancestral polymorphism Mol Ecol. 15 7 2007 2012
    • (2006) Mol Ecol. , vol.15 , pp. 2007-2012
    • Lexer, C.1    Kremer, A.2    Petit, R.J.3
  • 13
    • 33745039550 scopus 로고    scopus 로고
    • Moving beyond single-locus studies to characterize hybridization between oaks (Quercus spp.)
    • 8
    • G Muir C Schlötterer 2006 Moving beyond single-locus studies to characterize hybridization between oaks (Quercus spp.) Mol Ecol. 15 8 2301 2304
    • (2006) Mol Ecol. , vol.15 , pp. 2301-2304
    • Muir, G.1    Schlötterer, C.2
  • 14
    • 0030886378 scopus 로고    scopus 로고
    • Phylogenetic assessment of length variation at a microsatellite locus
    • 20
    • G Ortí DE Pearse JC Avise 1997 Phylogenetic assessment of length variation at a microsatellite locus Proc Natl Acad Sci U S A. 94 20 10745 10749
    • (1997) Proc Natl Acad Sci U S A. , vol.94 , pp. 10745-10749
    • Ortí, G.1    Pearse, D.E.2    Avise, J.C.3
  • 15
    • 3242663314 scopus 로고    scopus 로고
    • Microsatellite marker development and analysis in the Eastern Oyster (Crassostrea virginica): Confirmation of null alleles and non-Mendelian segregation ratios
    • 4
    • KS Reece WL Ribeiro PM Gaffney 2004 Microsatellite marker development and analysis in the Eastern Oyster (Crassostrea virginica): confirmation of null alleles and non-Mendelian segregation ratios J Hered. 95 4 346 351
    • (2004) J Hered. , vol.95 , pp. 346-351
    • Reece, K.S.1    Ribeiro, W.L.2    Gaffney, P.M.3
  • 16
    • 0032510099 scopus 로고    scopus 로고
    • Genome evolution: Are microsatellites really simple sequences
    • 4
    • C Schlötterer 1998 Genome evolution: are microsatellites really simple sequences Curr Biol. 8 4 R132 R134
    • (1998) Curr Biol. , vol.8
    • Schlötterer, C.1
  • 17
    • 33645894192 scopus 로고    scopus 로고
    • Microsatellites for ecologists: A practical guide to using and evaluating microsatellite markers
    • 5
    • KA Selkoe RJ Toonen 2006 Microsatellites for ecologists: a practical guide to using and evaluating microsatellite markers Ecol Lett. 9 5 615 629
    • (2006) Ecol Lett. , vol.9 , pp. 615-629
    • Selkoe, K.A.1    Toonen, R.J.2
  • 18
    • 26644459260 scopus 로고    scopus 로고
    • Mutational bias in penguin microsatellite DNA
    • 5
    • LD Shepherd DM Lambert 2005 Mutational bias in penguin microsatellite DNA J Hered. 96 5 566 571
    • (2005) J Hered. , vol.96 , pp. 566-571
    • Shepherd, L.D.1    Lambert, D.M.2
  • 19
    • 0031128134 scopus 로고    scopus 로고
    • Identification and characterization of (GA/CT)n-microsatellite loci from Quercus petraea
    • 6
    • H Steinkellner S Fluch E Turetschek 1997 Identification and characterization of (GA/CT)n-microsatellite loci from Quercus petraea Plant Mol Biol. 33 6 1093 1096
    • (1997) Plant Mol Biol. , vol.33 , pp. 1093-1096
    • Steinkellner, H.1    Fluch, S.2    Turetschek, E.3
  • 20
    • 0037350984 scopus 로고    scopus 로고
    • Nuclear DNA analyses in genetic studies of populations: Practice, problems and prospects
    • 3
    • D-X Zhang GM Hewitt 2003 Nuclear DNA analyses in genetic studies of populations: practice, problems and prospects Mol Ecol. 12 3 563 584
    • (2003) Mol Ecol. , vol.12 , pp. 563-584
    • Zhang, D.-X.1    Hewitt, G.M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.