메뉴 건너뛰기




Volumn 59, Issue 9, 2008, Pages 2403-2416

Molecular characterization and expression analysis of the Rab GTPase family in Vitis vinifera reveal the specific expression of a VvRabA protein

Author keywords

EST database; Fruit ripening; Genome mapping; Grapevine phylogeny; Quantitative RT PCR; Rab GTPase; Transcript level; Unigene clustering; Vitis vinifera

Indexed keywords

VITACEAE; VITIS; VITIS VINIFERA;

EID: 48649091042     PISSN: 00220957     EISSN: 14602431     Source Type: Journal    
DOI: 10.1093/jxb/ern132     Document Type: Article
Times cited : (27)

References (43)
  • 2
    • 49749138106 scopus 로고
    • The mechanism of ethylene action
    • Abeles FB, Morgan PW, Salveit ME eds, New York, USA: Academic Press
    • Abeles FB, Morgan PW, Salveit ME (eds). 1992. The mechanism of ethylene action. In: Ethylene in plant biology. New York, USA: Academic Press. 264-285.
    • (1992) Ethylene in plant biology , pp. 264-285
  • 6
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • Bradford MM. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Analytical Biochemistry 72, 248-254.
    • (1976) Analytical Biochemistry , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 8
    • 30344486790 scopus 로고    scopus 로고
    • Rab 11 GTPase-regulated membrane trafficking is crucial for tip-focused pollen tube growth in tobacco
    • De Graaf BHJ, Cheung AY, Andreyeva T, Levasseur K, Kieliszewski M, Wu H. 2005. Rab 11 GTPase-regulated membrane trafficking is crucial for tip-focused pollen tube growth in tobacco. The Plant Cell 17, 2564-2579.
    • (2005) The Plant Cell , vol.17 , pp. 2564-2579
    • De Graaf, B.H.J.1    Cheung, A.Y.2    Andreyeva, T.3    Levasseur, K.4    Kieliszewski, M.5    Wu, H.6
  • 9
    • 0014276538 scopus 로고
    • Nutrient requirements of suspension cultures of soybean root cells
    • Gamborg OL, Miller RA, Ojima K. 1968. Nutrient requirements of suspension cultures of soybean root cells. Experimental Cell Research 50, 151-158.
    • (1968) Experimental Cell Research , vol.50 , pp. 151-158
    • Gamborg, O.L.1    Miller, R.A.2    Ojima, K.3
  • 10
    • 33644652874 scopus 로고    scopus 로고
    • Characterizing the grape transcriptome. Analysis of ESTs from multiple Vitis species and development of a compendium of gene expression during berry development
    • Goes da Silva FD, Iandolino AB, Al-Kayal F, et al. 2005. Characterizing the grape transcriptome. Analysis of ESTs from multiple Vitis species and development of a compendium of gene expression during berry development. Plant Physiology 139, 574-597.
    • (2005) Plant Physiology , vol.139 , pp. 574-597
    • Goes da Silva, F.D.1    Iandolino, A.B.2    Al-Kayal, F.3
  • 13
    • 34848886909 scopus 로고    scopus 로고
    • The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla
    • Jaillon O, Aury JM, Noel B, et al. 2007. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Nature 449, 463-467.
    • (2007) Nature , vol.449 , pp. 463-467
    • Jaillon, O.1    Aury, J.M.2    Noel, B.3
  • 14
    • 33645769516 scopus 로고    scopus 로고
    • Comparative and evolutionary analysis of genes encoding small GTPases and their activating proteins in eukaryotic genomes
    • Jiang SY, Ramachandran S. 2006. Comparative and evolutionary analysis of genes encoding small GTPases and their activating proteins in eukaryotic genomes. Physiological Genomics 24, 235-251.
    • (2006) Physiological Genomics , vol.24 , pp. 235-251
    • Jiang, S.Y.1    Ramachandran, S.2
  • 15
    • 0029012960 scopus 로고
    • Biochemical and molecular characterization of a barley seed β-glucosidase
    • Leah R, Kigel J, Svendsen I, Mundy J. 1995. Biochemical and molecular characterization of a barley seed β-glucosidase. Journal of Biological Chemistry 270, 15789-15797.
    • (1995) Journal of Biological Chemistry , vol.270 , pp. 15789-15797
    • Leah, R.1    Kigel, J.2    Svendsen, I.3    Mundy, J.4
  • 16
    • 0030113339 scopus 로고    scopus 로고
    • Tomato Rab1A homologs as molecular tools for studying Rab geranylgeranyl transferase in plant cells
    • Loraine AE, Yalovsky S, Fabry S, Gruissem W. 1996. Tomato Rab1A homologs as molecular tools for studying Rab geranylgeranyl transferase in plant cells. Plant Physiology 110, 1337-1347.
    • (1996) Plant Physiology , vol.110 , pp. 1337-1347
    • Loraine, A.E.1    Yalovsky, S.2    Fabry, S.3    Gruissem, W.4
  • 17
    • 0034872903 scopus 로고    scopus 로고
    • Developmental abnormalities and reduced fruit softening in tomato plants expressing an antisense Rab 11 GTPase gene
    • Lu C, Zainal Z, Tucker GA, Lycett GW. 2001. Developmental abnormalities and reduced fruit softening in tomato plants expressing an antisense Rab 11 GTPase gene. The Plant Cell 13, 1819-1833.
    • (2001) The Plant Cell , vol.13 , pp. 1819-1833
    • Lu, C.1    Zainal, Z.2    Tucker, G.A.3    Lycett, G.W.4
  • 18
    • 0013599979 scopus 로고    scopus 로고
    • Molecular cloning and nucleotide sequence of a Rab7 small GTP-binding protein from apricot fruit. Gene expression during fruit ripening (PGR97-117)
    • Mbeguie-A-Mbeguie D, Gomez RM, Fils-Lycaon B. 1997. Molecular cloning and nucleotide sequence of a Rab7 small GTP-binding protein from apricot fruit. Gene expression during fruit ripening (PGR97-117). Plant Physiology 114, 1569.
    • (1997) Plant Physiology , vol.114 , pp. 1569
    • Mbeguie-A-Mbeguie, D.1    Gomez, R.M.2    Fils-Lycaon, B.3
  • 20
    • 49749110623 scopus 로고
    • Le problème de la transformation tumorale chez les végétaux.
    • Morel G. 1970. Le problème de la transformation tumorale chez les végétaux. Physiologie Végétale 8, 60-64.
    • (1970) Physiologie Végétale , vol.8 , pp. 60-64
    • Morel, G.1
  • 21
    • 0242515766 scopus 로고    scopus 로고
    • Ethylene regulates monomeric GTP-binding protein gene expression and activity in Arabidopsis
    • Moshkov IE, Mur LAJ, Novikova GV, Smith AR, Hall MA. 2003a. Ethylene regulates monomeric GTP-binding protein gene expression and activity in Arabidopsis. Plant Physiology 131, 1705-1717.
    • (2003) Plant Physiology , vol.131 , pp. 1705-1717
    • Moshkov, I.E.1    Mur, L.A.J.2    Novikova, G.V.3    Smith, A.R.4    Hall, M.A.5
  • 22
    • 0037392439 scopus 로고    scopus 로고
    • Ethylene rapidly up-regulates the activities of both monomeric GTP-binding proteins and protein kinase(s) in epicotyls of pea
    • Moshkov IE, Mur LAJ, Novikova GV, Smith AR, Hall MA. 2003b. Ethylene rapidly up-regulates the activities of both monomeric GTP-binding proteins and protein kinase(s) in epicotyls of pea. Plant Physiology 131, 1718-1726.
    • (2003) Plant Physiology , vol.131 , pp. 1718-1726
    • Moshkov, I.E.1    Mur, L.A.J.2    Novikova, G.V.3    Smith, A.R.4    Hall, M.A.5
  • 23
    • 84982358134 scopus 로고
    • A revised medium for rapid growth and bioassays with tobacco tissue cultures
    • Murashige T, Skoog F. 1962. A revised medium for rapid growth and bioassays with tobacco tissue cultures. Physiologia Plantarum 15, 473-497.
    • (1962) Physiologia Plantarum , vol.15 , pp. 473-497
    • Murashige, T.1    Skoog, F.2
  • 24
    • 0032006010 scopus 로고    scopus 로고
    • Transcripts of a gene, encoding a small GTP-binding protein from Fagus sylvatica, are induced by ABA and accumulated in the embryonic axis of dormant seeds
    • Nicolas C, Nicolas G, Rodriguez D. 1998. Transcripts of a gene, encoding a small GTP-binding protein from Fagus sylvatica, are induced by ABA and accumulated in the embryonic axis of dormant seeds. Plant Molecular Biology 36, 487-491.
    • (1998) Plant Molecular Biology , vol.36 , pp. 487-491
    • Nicolas, C.1    Nicolas, G.2    Rodriguez, D.3
  • 25
    • 9244226570 scopus 로고    scopus 로고
    • Isolation and characterization of novel mutants affecting the abscisic acid sensitivity of Arabidopsis germination and seedling growth
    • Nishimura N, Yoshida T, Murayama M, Asami T, Shinozaki K, Hirayama T. 2004. Isolation and characterization of novel mutants affecting the abscisic acid sensitivity of Arabidopsis germination and seedling growth. Plant and Cell Physiology 45, 1485-1499.
    • (2004) Plant and Cell Physiology , vol.45 , pp. 1485-1499
    • Nishimura, N.1    Yoshida, T.2    Murayama, M.3    Asami, T.4    Shinozaki, K.5    Hirayama, T.6
  • 26
    • 33644886572 scopus 로고    scopus 로고
    • Localization of a flavonoid biosynthetic polyphenol oxidase in vacuoles
    • Ono E, Hatayama M, Isono Y, et al. 2006. Localization of a flavonoid biosynthetic polyphenol oxidase in vacuoles. The Plant Journal 45, 133-143.
    • (2006) The Plant Journal , vol.45 , pp. 133-143
    • Ono, E.1    Hatayama, M.2    Isono, Y.3
  • 27
    • 0034714098 scopus 로고    scopus 로고
    • The mammalian Rab family of small GTPases: Definition of family and subfamily sequence motifs suggests a mechanism for functional specificity in the Ras superfamily
    • Pereira-Leal JB, Seabra MC. 2000. The mammalian Rab family of small GTPases: definition of family and subfamily sequence motifs suggests a mechanism for functional specificity in the Ras superfamily. Journal of Molecular Biology 301, 1077-1087.
    • (2000) Journal of Molecular Biology , vol.301 , pp. 1077-1087
    • Pereira-Leal, J.B.1    Seabra, M.C.2
  • 28
    • 0035798385 scopus 로고    scopus 로고
    • Evolution of the Rab family of small GTP-binding proteins
    • Pereira-Leal JB, Seabra MC. 2001. Evolution of the Rab family of small GTP-binding proteins. Journal of Molecular Biology 313, 889-901.
    • (2001) Journal of Molecular Biology , vol.313 , pp. 889-901
    • Pereira-Leal, J.B.1    Seabra, M.C.2
  • 29
    • 34548432376 scopus 로고    scopus 로고
    • Two-dimensional electrophoretic analysis applied to Vitis vinifera
    • Perugini I, Schubert A. 2002. Two-dimensional electrophoretic analysis applied to Vitis vinifera. Acta Horticulturae 603, 545-547.
    • (2002) Acta Horticulturae , vol.603 , pp. 545-547
    • Perugini, I.1    Schubert, A.2
  • 30
    • 26444611433 scopus 로고    scopus 로고
    • A characterization of the response to auxin of the small GTPase, Rha1
    • Qi X, Zhou J, Jia Q, Shou H, Chen H, Wu P. 2005. A characterization of the response to auxin of the small GTPase, Rha1. Plant Science 169, 1136-1145.
    • (2005) Plant Science , vol.169 , pp. 1136-1145
    • Qi, X.1    Zhou, J.2    Jia, Q.3    Shou, H.4    Chen, H.5    Wu, P.6
  • 31
    • 0036883478 scopus 로고    scopus 로고
    • The Arabidopsis Rab GTPases: Another enigma variation
    • Rutherford S, Moore I. 2002. The Arabidopsis Rab GTPases: another enigma variation. Current Opinion in Cell Biology 5, 518-528.
    • (2002) Current Opinion in Cell Biology , vol.5 , pp. 518-528
    • Rutherford, S.1    Moore, I.2
  • 33
    • 0003428215 scopus 로고
    • Seymour GB, Taylor JE, Tucker GA, eds, London: Chapman and Hall
    • Seymour GB, Taylor JE, Tucker GA. (eds). 1993. Biochemistry of fruit ripening. London: Chapman and Hall.
    • (1993) Biochemistry of fruit ripening
  • 34
  • 35
    • 51249177099 scopus 로고
    • Method for the isolation of high quality RNA from grape berry tissues without contaminating tannins or carbohydrates
    • Tesniere C, Vayda MEV. 1991. Method for the isolation of high quality RNA from grape berry tissues without contaminating tannins or carbohydrates. Plant Molecular Biology Reporter 9, 242-251.
    • (1991) Plant Molecular Biology Reporter , vol.9 , pp. 242-251
    • Tesniere, C.1    Vayda, M.E.V.2
  • 36
    • 0036221545 scopus 로고    scopus 로고
    • Grapevine (Vitis vinifera L.) promoter analysis by biolistic-mediated transient transformation of cell suspensions
    • Torregrosa L, Verries C, Tesniere C. 2002. Grapevine (Vitis vinifera L.) promoter analysis by biolistic-mediated transient transformation of cell suspensions. Vitis 41, 27-32.
    • (2002) Vitis , vol.41 , pp. 27-32
    • Torregrosa, L.1    Verries, C.2    Tesniere, C.3
  • 37
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22, 4673-4680.
    • (1994) Nucleic Acids Research , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 38
    • 0029921497 scopus 로고    scopus 로고
    • Characterization and subcellular localization of a small GTP-binding protein (Ara4) from Arabidopsis: Conditional expression under control of the promoter of the gene for heat-shock protein HSP81-1
    • Ueda T, Anai T, Tsukaya H, Hirata A, Uchimiya H. 1996. Characterization and subcellular localization of a small GTP-binding protein (Ara4) from Arabidopsis: conditional expression under control of the promoter of the gene for heat-shock protein HSP81-1. Molecular and General Genetics 250, 533-539.
    • (1996) Molecular and General Genetics , vol.250 , pp. 533-539
    • Ueda, T.1    Anai, T.2    Tsukaya, H.3    Hirata, A.4    Uchimiya, H.5
  • 39
    • 0035801358 scopus 로고    scopus 로고
    • Ara6, a plant-unique novel type Rab GTPase, functions in the endocytic pathway of Arabidopsis thaliana
    • Ueda T, Yamaguchi M, Uchimiya H, Nakano A. 2001. Ara6, a plant-unique novel type Rab GTPase, functions in the endocytic pathway of Arabidopsis thaliana. EMBO Journal 20, 4730-4741.
    • (2001) EMBO Journal , vol.20 , pp. 4730-4741
    • Ueda, T.1    Yamaguchi, M.2    Uchimiya, H.3    Nakano, A.4
  • 41
    • 0036846912 scopus 로고    scopus 로고
    • Plasma membrane-associated ROP10 small GTPase is a specific negative regulator of abscisic acid responses in Arabidopsis
    • Yang Z. 2002. Plasma membrane-associated ROP10 small GTPase is a specific negative regulator of abscisic acid responses in Arabidopsis. The Plant Cell 14, 2787-2797.
    • (2002) The Plant Cell , vol.14 , pp. 2787-2797
    • Yang, Z.1
  • 42
    • 0030581754 scopus 로고    scopus 로고
    • A rab11-like gene is developmentally regulated in ripening mango (Mangifera indica L.) fruit
    • Zainal Z, Tucker GA, Lycett GW. 1996. A rab11-like gene is developmentally regulated in ripening mango (Mangifera indica L.) fruit. Biochimica et Biophysica Acta 1314, 187-190.
    • (1996) Biochimica et Biophysica Acta , vol.1314 , pp. 187-190
    • Zainal, Z.1    Tucker, G.A.2    Lycett, G.W.3
  • 43
    • 34547886878 scopus 로고    scopus 로고
    • Diversification of the RAB guanosine triphosphatase family in dicots and monocots
    • Zhang J, Hill DR, Sylvester AW. 2007. Diversification of the RAB guanosine triphosphatase family in dicots and monocots. Journal of Integrative Plant Biology 49, 1129-1141.
    • (2007) Journal of Integrative Plant Biology , vol.49 , pp. 1129-1141
    • Zhang, J.1    Hill, D.R.2    Sylvester, A.W.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.