Electrochemical investigation of oligonucleotide-DNA hybridization on poly(4-methoxyphenethylamine)

International Journal of Molecular Sciences

Volumn 9, Issue 7, 2008, Pages 1173-1187

  Silva, Francielle B ^a   Vieira, Sabrina N ^a   Filho, Luiz R Goulart ^a   Boodts, Julien F C ^a   Brito Madurro, Ana G ^a   Madurro, João M ^a  

^a FEDERAL UNIVERSITY OF UBERLÂNDIA   (Brazil)

Author keywords

Electrochemical investigation; Hybridization; Immobilization; Nucleotides; Oligonucleotides; Voltammetry

Indexed keywords

ADENINE; ADENOSINE; CYTOSINE; DNA; GUANINE; GUANOSINE; METHYLENE BLUE; OLIGONUCLEOTIDE; PHENETHYLAMINE DERIVATIVE; PURINE; PYRIMIDINE; THYMINE;

ARTICLE; DIFFERENTIAL PULSE VOLTAMMETRY; DNA HYBRIDIZATION; ELECTROCHEMICAL ANALYSIS; ELECTROCHEMICAL IMPEDANCE SPECTROSCOPY; ELECTROCHEMISTRY; ELECTRODE; IMMOBILIZATION; POLYMERIZATION;

EID: 48649087043     PISSN: None     EISSN: 14220067     Source Type: Journal    
DOI: 10.3390/ijms9071173     Document Type: Article

References (41)

1. Banks, C.E.; Davies, T.J.; Wildgoose, G.G.; Compton, R.G. Electrocatalysis at Graphite and Carbon Nanotube Modified Electrodes: Edge-Plane Sites and Tube Ends Are the Reactive Sites. Chem. Commun. 2005, 21, 829-841.
2. Bianco-Lopez, M.C.; Lobo-Castanon, M.J.; Miranda-Ordieres, A.J.; Tunon-Blanco, P. Voltammetric Sensor for Vanillylmandelic Acid Based on Molecularly Imprinted Polymer-Modified Electrodes. Biosens. Bioelectron. 2003, 18, 353-362.
3. Kutner, W.; Wang, J.; L'her, M.; Buck, R. Analytical Aspects of Chemically Modified Electrodes: Classification, Critical Evaluation and Recommendations. Pure Appl. Chem. 1998, 70, 1301-1318.
4. Chidsey, C.E.D.; Murray, R.W. Electroactive Polymers and Macromolecular Electronics. Science 1986, 237,25-31.
5. Bardavid, Y.; Kotlyar, A.B.; Yitzchaik, S. Conducting Polymers Coated DNA. Macromol. Symp. 2006, 240,102-106.
6. Kulkarni, M.V.; Viswanath, A.K.; Khanna, P.K. Synthesis and Characterization of Poly(N-Methyl Aniline) Doped with Sulphonic Acids: Their Application as Humidity Sensors. J. Appl. Polym. Sci. 2006, 99,812-820.
7. Menezes, H.A.; Maia, G. Films Formed by the Electrooxidation of p-Aminophenol (p-Aph) in Aqueous Medium: What Do They Look Like?. J. Electroanal. Chem. 2006, 586, 39-48.
8. Topcu-Sulak, M.; Gokdogan, O.; Gulce, A.; Gulce, H. Amperometric Glucose Biosensor Based on Gold-Deposited Polyvinylferrocene Film on Pt Electrode. Biosens. Bioelectron. 2006, 21, 1719-1726.
9. Ortega, J.M., Electrodeposition of Copper on Poly (o-Aminophenol) Modified Platinum Electrode. Thin Solid Films 2000, 260, 159-165.
10. Lofrano, R.C.Z.; Madurro, J.M.; Abrantes, L.M.; Romero J.R. Electrocatalytic Hydrogenation of Carbonylic Compounds Using an Electrode with Platinum Particles Dispersed in Films of Poly-[Allyl Ether P-(2-Aminoethyl) Phenol]. J. Mol. Catal. A: Chem. 2004, 218, 73-79.
11. Lofrano, R.C.Z.; Madurro, J.M.; Romero, J.R. Preparation and Properties of an Electrode Coated with a Cerium Poly(Allyl Ether p-Benzenesulfonate) Film for Electrorganic Reactions. J. Mol. Catal. A: Chem. 2000, 153, 237-242.
12. Castro, C.M.; Vieira, S.N.; Goncalves, R.A.; Madurro, A.G.B.; Madurro, J.M.; Electrochemical and Morphologic Studies of Nickel Incorporation on Graphite Electrodes Modified with Polytyramine. J. Mater. Sci. 2008, 43, 475-482.
13. Franco, D.L.; Afonso, A.S.; Vieira, S.N.; Ferreira, L.F.; Goncalves, R.A.; Madurro, A.G.B.; Madurro, J.M. Electropolymerization of 3-Aminophenol on Carbon Graphite Surface: Electric and Morphologic Properties. Mater. Chem. Phys. 2008, 107, 404-409.
14. Vieira, S.N.; Ferreira, L.F.; Franco, D.L.; Afonso, A.S.; Goncalves, R.A.; Madurro, A.G.B.; Madurro, J.M. Electrochemical Modification of Graphite Electrodes with Poly(4-Aminophenol). Macromol. Symp. 2006, 245, 236-242.
15. Rho, S.; Jahng, D.; Lim, J.H.; Choi, J.; Chang, J. H.; Lee, S.C.; Kim, K.J. Electrochemical DNA Biosensors Based on Thin Gold Films Sputtered on Capacitive Nanoporous Niobium Oxide. Biosens. Bioelectron. 2008, 23, 852-856.
16. Ferreira, L.F.; Boodts, J.F.C.; Madurro, A.G.B.; Madurro, J.M. Gold Electrodes Modified with Poly(4-Aminophenol): Incorporation of Nitrogenated Bases and an Oligonucleotide. Polym. Int. 2008, 57, 644-650.
17. Madurro, A.G.B.; Ferreira, L.F.; Vieira, S.N.; Goulart, L.R; Madurro, J.M. Immobilization of Purine Bases in Poly-4-Aminophenol Matrix. J. Mater. Sci. 2007, 42, 3238-3243.
18. Popovich, N.D.; Eckhardt, A.E.; Mikulecky, J.C.; Napier, M.E.; Thomas, RS. Electrochemical Sensor for Detection of Unmodified Nucleic Acids. Talanta 2002, 56, 821-828.
19. Wang, J.; Palecek, E.; Nielsen, P.E.; Rivas, G.; Cai, X.; Shiraishi, H.; Dontha, N; Luo, D.; Farias, P.A.M. Peptide Nucleic Acid Probes for Sequence-Specific DNA Biosensors. J. Am. Chem. Soc. 1996, 118,1661-1610.
20. Xu, H.; Liu, X; Cui, D.;Li, M.; Jiang, M. A Novel Method for Improving the Performance of ZnO Gas Sensors. Sens. Actuators, B 2006, 114, 301-307.
21. Palecek, E. From Polarography of DNA to Microanalysis with Nucleic Acid-Modified Electrodes. Electroanalysis 1996, 8, 7-14.
22. Mikkelson, S.R. Electrochemical Biosensors for DNA Sequence Detection. Electroanalysis 1996, 8, 15-19.
23. Palecek, E.; Postbieglova, I. Adsorptive Stripping Voltammetry of Biomacromolecules with Transfer of the Adsorbed Layer. J. Electroanal. Chem. 1986, 214, 359-371.
24. Palecek, E. Oscillographic Polarography of Highly Polymerized Deoxyribonucleic Acid. Nature 1960, 188, 656-657.
25. Lin, H.; Xu, D.K.; Chen, H.Y. Simultaneous Determination of Purine Bases, Ribonucleosides and Ribonucleotides by Capillary Electrophoresis- Electrochemistry with a Copper Electrode. J. Chromatogr. 1997, 760, 227-233.
26. Kafil, J.B.; Cheng, H.Y.; Last, T. Quantitation of Nucleic Acids at the Picogram Level Using HPLC with Electrochemical Detection. Anal. Chem. 1986, 58, 285-289.
27. Oliveira-Brett, A.M.; Piedade, JA; Silva, LA.; Diculescu, V.C. Voltammetric Determination of all DNA Nucleotides. Anal. Biochem. 2004, 332, 321-329.
28. Ozkan D.; Erdem A.; Kara P.; Kerman K.; Meric B.; Hassmann J.; Ozsoz, M. Allele-Specific Genotype Detection of Factor V Leiden Mutation from Polymerase Chain Reaction Amplicons Based on Label-Free Electrochemical Genosensor. Anal. Chem. 2002, 74, 5931-5936.
29. Lassalle, N.; Vieil, E.; Correia, J.P.; Abrantes, L.M. Study of DNA Hybridization on Polypyrrole Grafted with Oligonucleotides by Photocurrent Spectroscopy. Biosens. Bioelectron. 2001, 16, 295-303.
30. Franco, D.L.; Afonso, A.S.; Ferreira, L.F.; Goncalves, R.A.; Boodts, J.F.C.; Madurro, A.G.B.; Madurro, J.M. Electrodes Modified with Polyaminophenols: Immobilization of Purines and Pyrimidines. Pol. Eng. Sci. 2008, in press.
31. Stempkowska, I.; Ligaj, M.; Jasnowska, J.; Langer, J.; Filipiak, M. Electrochemical Response of Oligonucleotides on Carbon Paste Electrode. Bioelectrochemistry 2007, 70, 488-494.
32. Pham, M.C.; Piro, B; Tran, L.D, Direct Electrochemical Detection of Oligonucleotide Hybridization on Poly(5-Hydroxy-1,4-Naphthoquinone-Co-5 -Hydroxy-3 -Thioacetic Acid-1,4-Naphthoquinone) Film Anal. Chem. 2003, 75, 6748-6752.
33. Okutucu, B; Telefoncu, A. Covalent Attachment of Oligonucleotides to Cellulose Acetate Membranes. Artif. Cells Blood Substit. Immobil. Biotechnol. 2004, 32, 599-608.
34. Yang, M.; McGovern, M.E.; Thompson, M.; Genosensor Technology and the Detection of Interfacial Nucleic Acid Chemistry. Anal. Chim. Acta 1997, 346, 259-275.
35. La-Scalea M.A.; Serrano S.H.P., Gutz, I.G.R. Eletrodos Modificados com DNA: uma Nova Alternativa em Eletroanalise. Quim. Nova 1999, 22, 417-424.
36. Jin, Y.; Yao, X.; Liu, Q.; Li, J. Hairpin DNA Probe Based Electrochemical Biosensor Using Methylene Blue as Hybridization Indicator. Biosens. Bioelectron. 2007, 22, 1126-1130.
37. Yan, F.; Erdem, A.; Meric, B.; Kerman, K.; Ozsoz, M. Electrochemical DNA Biosensor for the Detection of Specific Gene Related to Microcystis Species. Electrochem. Commum. 2001, 3, 224-228.
38. Rons, R.; Sklenar, H.; Lavery, R.; Roder, B. Methylene Blue Binding to DNA with Alternating GC Base Sequence: a Modeling Study. J. Am. Chem. Soc. 2000, 122, 2860-2866.
39. Enescu, M.; Bernard, L.; Gheorghe, V. Molecular Dynamics Simulation of Methylene Blue -Guanine Complex in Water: the Role of Solvent in Stacking. J. Phys. Chem. 2000, 104, 1073-1077.
40. Kara, P.; Kermam, K.; Ozkan, D.; Meric, B.; Erdem, A.; Ozkan, Z.; Ozsoz, M. Electrochemical Genosensor for the Detection of Interaction Between Methylene Blue and DNA. Electrochem. Commun. 2002, 4, 705-709.
41. Bonanni, A.; Esplandiu, M.J.; Pividori, M.I.; Alegret, S.; del Valle, M. Impedimetric Genosensors for the Detection of DNA Hybridization. Anal. Bioanal. Chem. 2006, 355, 1195-1201.