Incorporating PCA and fuzzy-ART techniques into achieve organism classification based on codon usage consideration

Computers in Biology and Medicine

Volumn 38, Issue 8, 2008, Pages 886-893

  Hsieh, Kun Lin ^a   Yang, I Ching ^a  

^a NATIONAL TAITUNG UNIVERSITY   (Taiwan)

Author keywords

Codon usage; Fuzzy adaptive resonance theory (fuzzy ART); Principle component analysis (PCA)

Indexed keywords

ACIDS; AMINATION; AMINES; AMINO ACIDS; ARSENIC COMPOUNDS; CLASSIFICATION (OF INFORMATION); DNA; FLOW OF SOLIDS; FUZZY LOGIC; GENES; INFORMATION USE; LEAD; NUCLEIC ACIDS; ORGANIC ACIDS;

BASIC ELEMENTS; CLUSTERING ANALYSIS; CLUSTERING TECHNIQUES; CODON USAGES; COMPLICATED STRUCTURES; FUZZY ART; HIDDEN INFORMATION; HIGH DIMENSIONS; INTEGRATED APPROACH; ORGANISMS CLASSIFICATION; PRINCIPLE COMPONENT ANALYSIS (PCA);

FUZZY CLUSTERING;

AMINO ACID DERIVATIVE;

ARTICLE; BACILLUS; BACILLUS ANTHRACIS; BACILLUS CEREUS; BACILLUS CLAUSII; BACILLUS HALODURANS; BACILLUS LICHENIFORMIS; BACILLUS SUBTILIS; BACILLUS THURINGIENSIS; CLASSIFICATION; CODON USAGE; DNA SEQUENCE; ESCHERICHIA COLI; FEASIBILITY STUDY; FUZZY ADAPTIVE RESONANCE THEORY; MATHEMATICAL COMPUTING; NONHUMAN; NUCLEOTIDE SEQUENCE; ORGANISM; PRINCIPAL COMPONENT ANALYSIS; PRIORITY JOURNAL; PYROCOCCUS ABYSSI; PYROCOCCUS FURIOSUS; PYROCOCCUS HORIKOSHII; THEORETICAL STUDY;

CLUSTER ANALYSIS; CODON; FUZZY LOGIC; PRINCIPAL COMPONENT ANALYSIS;

EID: 48349142137     PISSN: 00104825     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.compbiomed.2008.05.007     Document Type: Article

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