Phylogenetic analysis of epiphytic marine bacteria on Hole-Rotten diseased sporophytes of Laminaria japonica

Journal of Applied Phycology

Volumn 20, Issue 4, 2008, Pages 403-409

  Wang, Gaoge ^a,c   Shuai, Li ^b   Li, Yun ^a   Lin, Wei ^c   Zhao, Xiaowei ^a   Duan, Delin ^c  

^a OCEAN UNIVERSITY OF CHINA   (China)

^b QINGDAO UNIVERSITY   (China)

^c INSTITUTE OF OCEANOLOGY   (China)

Author keywords

16S rRNA gene; Laminaria japonica; Marine bacteria; Phylogenetic analysis

Indexed keywords

BACILLUS (BACTERIUM); BACTERIA (MICROORGANISMS); HALOMONAS; LAMINARIA; LAMINARIA JAPONICA; NEGIBACTERIA; PSEUDOALTEROMONAS; VIBRIO;

EID: 48349094238     PISSN: 09218971     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10811-007-9274-4     Document Type: Article

References (38)

1. JH Andrews 1976 The pathology of marine algae Biol Rev 51 211 253
2. Bain N, Shewan JM (1968) Identification of Alteromonas, Vibrio and Related Organisms. In: Gibbs BM (ed) Identification methods for microbiologists, Part B. Academic Press, New York, pp. 106-120
3. D Chen GH Lin SZ Shen 1979 Studies on alginic acid decomposing bacteria I. Action of alginic acid decomposing bacteria and alginase on Laminaria japonica Oceanol Limnol Sinica 10 4 229 233
4. D Chen GH Lin SZ Shen 1981 Studies on alginic acid decomposing bacteria II. Rot disease of Laminaria summer sporelings caused by alginic acid decomposing bacteria Oceanol Limnol Sinica 12 2 133 137
5. D Chen XY Liu XZ Liu YD Yu AH Yang 1984 Studies on alginic acid decomposing bacteria III. The cause of the rot disease and detaching of Laminaria sporophytes in sporeling culture stations and their preventive measures Oceanol Limnol Sinica 15 6 581 589
6. D Chen XY Liu XZ Liu QX Wang 1986 Studies on alginic acid decomposing bacteria IV. Distribution of alginic acid decomposing bacteria in Laminaria farm and its ecological significance Oceanol Limnol Sinica 17 2 137 143
7. EF DeLong DG Franks AL Alldredge 1993 Phylogenetic diversity of aggregate-attached vs. free-living bacterial communities Limnol Oceanog 38 924 934
8. ML Ding 1990 The influence of environmental factors on rot disease of Laminaria caused by alginic acid decomposing bacteria Acta Oceanol Sinica 12 2 224 230
9. H Eilers J Pernthaler FO Glockner R Amann 2000 Culturability and in situ abundance of pelagic bacteria from the North Sea Appl Environ Microbiol 66 3044 3051
10. Y Ezura H Yamamoto H Kimura 1988 Isolation of a marine bacterium that produces red-spots on the culture bed of Makonbu Laminaria japonica cultivation Nippon Suisan Gakkaishi 54 665 672
11. MM Fisher LW Wilcox IE Graham 1998 Molecular characterization of epiphytic bacterial communities on Charophycean green algae Appl Environ Microbiol 62 4433 4440
12. WD Grant LL Rhodes BA Porsser RA Asher 1986 Production of bacteriolytic enzymes and degradation of bacteria by filamentous fungi J Gen Microbiol 132 2353 2358
13. C Holmstrom S Kjelleberg 1999 Marine Pseudoalteromonas species are associated with higher organisms and produce biologically active extracellular agents FEMS Microbiol Ecol 30 285 293
14. H Huber MJ Hohn R Rachel T Fuchs VC Wimmer KO Stetter 2002 A new phylum of Archaea represented by a nanosized hyperthermophilic symbiont Nature 417 63 67
15. EP Ivanova T Sawabe YV Alexeeva AM Lysenko NM Gorshkova K Hayashi NV Zukova R Christen VV Mikhailov 2002 Pseudoalteromonas issachenkonii sp. nov., a bacterium that degrades the thallus of the brown alga Fucus evanescens Int J Syst Evol Microbiol 52 229 234
16. AE Jaffray VE Coyne 1996 Development of an in situ assay to detect bacterial pathogens of the red alga Gracilaria gracilis Steentoft, Irvine et Farnham J Appl Phycol 8 409 414
17. R Kusuda K Kawai F Salati Y Kawamura Y Yamashita 1992 Characteristics of Flavobacterium sp. causing 'suminori' disease in cultivated Porphyra Suisan Zoshoku 40 457 461
18. DB Largo K Fukami T Nishijima M Ohno 1995 Laboratory-induced development of the ice-ice disease of the farmed red algae Kappaphycus alvarezii and Eucheuma deticulatum (Solieriaceae, Gigartinales, Rhodophyta) J Appl Phycol 7 539 543
19. CR Lavilla-Pitogo 1992 Agar-digesting bacteria associated with "rotten thallus syndrome" of Gracilaria sp. Aquaculture 102 1 7
20. W Lin WW Zhang XJ Yan DL Duan 2004 Distribution and reinfection of alginic acid decomposing bacteria on juvenile Laminaria japonica Oceanol Limnol Sinica 35 6 562 567
21. Lobban CS, Harrison PJ, Duncan MJ (1985) The Physiological Ecology of Seaweeds. Cambridge Univ Press, New York, pp. 242
22. L Margulis D Chase R Guerrero 1986 Microbial communities Bioscience 36 160 170
23. RM Morris MS Rappe SA Connon WA Siebold CA Carlson SJ Giovannoni 2002 SAR11 clade dominates ocean surface bacterioplankton communities Nature 420 806 810
24. CH Oppenheimer CE ZoBell 1952 The growth and viability of sixty-three species of marine bacteria as influenced by hydrostatic pressure J Mar Res 11 10 18
25. NR Pace 1996 New perspective on the natural microbial world: molecular microbial ecology ASM News 62 463 470
26. C Paillard S Gausson JL Nicolas JP le Pennec D Haras 2006 Molecular identification of Vibrio tapetis, the causative agent of the brown ring disease of Ruditapes philippianrum Aquaculture 253 25 38
27. MS Rappe SA Connon KL Vergin SJ Giovannoni 2002 Cultivation of the ubiquitous SAR11 marine bacterioplankton clade Nature 418 630 633
28. T Sawabe H Makino M Tatsumi K Nakano K Tajima MM Iqbal I Yumoto Y Ezura R Christen 1998 Pseudoalteromonas bacteriolytica sp. nov., a marine bacterium that is the causative agent of red spot disease of Laminaria japonica Int J Syst Bacteriol 48 769 774
29. T and five strains isolated from spot wounded fronds of Laminaria japonica to Pseudoalteromonas elyakovii comb. nov. and the extended description of the species Int J Syst Bacteriol 50 265 271
30. GY Sun ZZ Yang SZ Shen 1984 Study on cultivating methods of summer sporelings of Laminaria, reinvestigation of the cause of rot disease and detaching of Laminaria sporophytes in Laminaria sporeling culture stations and their preventive measures Mar Sci 3 38 41
31. S Takamoto K Yamada Y Ezura 1994 Production of bacteriolytic enzymes during the growth of a marine bacterium Alteromonas sp. No. 8-R J Gen Appl Microbiol 40 499 508
32. CK Tseng 2001 Algal biotechnology industries and research activities in China J Appl Phycol 13 375 380
33. IJ Tsukidate 1977 Microbiological studies of Porphyra plants. V. On the relation between bacteria and Porphyra diseases Bull Nansei Reg Fish Res Lab 10 101 112
34. M Uchida T Maeda T Shiba 2002 Phylogenic analysis of three marine bacteria that have ability to decompose Laminaria japonica Fish Science 68 703 705
35. FR Uyenco LS Sanile GS Jacinto 1981 The 'ice-ice'problem in seaweed farming Int Seaweed Symp 10 625 630
36. GG Wang W Lin LJ Zhang XJ Yan DL Duan 2004 Study on cell death in Laminaria japonica (Phaeophyta) tissues infected with alginic acid decomposing bacterium Progress in Nature Science 12 1064 1068
37. HS Xu N Roberts FL Singleton RW Attwell DJ Grimes RR Colwell 1982 Survival and viability of nonculturable Escherichia coli and Vibrio cholerar in the estuarine and marine environment Microb Ecol 8 313 323
38. I Yumoto K Yamaguchi K Yamada Y Ezura T Kimura 1989 Relationship between bacterial flora and occurrence of the Alteromonas sp; the causative agent of red-spots on the culture bed of Makonbu Laminaria japonica, in the coastal area of Funka Bay Nippon Suisan Gakkaishi 55 1907 1914