Epigenetic silencers are enriched in dormant desert frog muscle

Journal of Comparative Physiology B: Biochemical, Systemic, and Environmental Physiology

Volumn 178, Issue 6, 2008, Pages 729-734

  Hudson, Nicholas J ^a   Lonhienne, T G A ^b   Franklin, Craig E ^c   Harper, Gregory S ^d   Lehnert, S A ^a  

^a CSIRO   (Australia)

^b Australian Government Australian Research Council   (Australia)

^c UNIVERSITY OF QUEENSLAND   (Australia)

^d Meat and Livestock Australia   (Australia)

Author keywords

Aestivation; Disuse; Dormancy; Epigenetic; Frog; Muscle; SIN3 co repressor

Indexed keywords

MESSENGER RNA;

ADAPTATION; ANIMAL; ARTICLE; CHROMATIN ASSEMBLY AND DISASSEMBLY; ENERGY METABOLISM; ENZYME INDUCTION; ENZYMOLOGY; FROGS AND TOADS; GENE SILENCING; GENETIC TRANSCRIPTION; GENETICS; METABOLISM; SKELETAL MUSCLE; UPREGULATION;

ANIMALS; ANURA; CHROMATIN ASSEMBLY AND DISASSEMBLY; ENERGY METABOLISM; ENZYME INDUCTION; ESTIVATION; GENE SILENCING; MUSCLE, SKELETAL; RNA, MESSENGER; TRANSCRIPTION, GENETIC; UP-REGULATION;

ANURA; CYCLORANA ALBOGUTTATA; VERTEBRATA;

EID: 48249148323     PISSN: 01741578     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00360-008-0261-0     Document Type: Article

References (23)

1. Berriel Diaz M, Lange M, Heldmaier G, Klingenspor M (2004) Depression of transcription and translation during daily torpor in the Djungarian hamster (Phodopus sungorus). J Comp Physiol B 174:495-502
2. Eddy SF, Morin P Jr, Storey KB (2006) Differential expression of selected mitochondrial genes in hibernating little brown bats, Myotis lucifigus. J Exp Zoolog A Comp Exp Biol 305:620-630
3. + gradients in the aestivating Australian goldfields frog, Neobatrachus wilsmorei. J Comp Physiol B 163:587-593
4. Fleischer TC, Yun UJ, Ayer DE (2003) Identification and characterisation of three new components of the mSIN3A corepressor complex. Mol Cell Biol 23:3456-3467
5. Fuks F, Burgers WA, Brehm A, Hughes-Davies L, Kouzarides T (2000) DNA methyltransferase Dnmt1 associates with histone deacetylase activity. Nat Genet 24:88-91
6. Grundy JE, Storey KB (1999) Antioxidant defence and lipid peroxidation damage in estivating toads, Scaphiosus couchii. J Comp Physiol B 168:132-142
7. Hudson NJ, Franklin CE (2002a) Maintaining muscle mass during extended disuse: aestivating frogs as a model species. J Exp Biol 255:2297-2303
8. Hudson NJ, Franklin CE (2002b) Effect of aestivation on muscle characteristics and locomotor performance in the green-striped burrowing frog, Cyclorana alboguttata. J Comp Physiol B 172:177-182
9. Hudson NJ, Lavidis NA, Choy PT, Franklin CE (2005) Effect of prolonged inactivity on skeletal motor nerve terminals during aestivation in the burrowing frog, Cyclorana alboguttata. J Comp Physiol A 191:373-379
10. Hudson NJ, Lehnert SA, Ingham AB, Symonds B, Franklin CE, Harper GS (2006) Lessons from an aestivating frog: sparing muscle protein despite starvation and disuse. Am J Physiol Regul Integr Comp 290:R836-843
11. Jaenisch R, Bird A (2003) Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals. Nat Genet Suppl 33:245-254
12. Larade K, Storey KB (2007) Arrest of transcription following anoxic exposure in a marine mollusc. Mol Cell Biochem 303:243-249
13. MacDonald JA Storey KB (2006) Identification of a 115kD MAP-kinase activated by freezing and anoxic stresses in the marine periwinkle, Littorina littorea. Arch Biochem Biophys 450:208-214
14. Morin P Jr, Storey KB (2006) Evidence for a reduced transcriptional state during hibernation in ground squirrels. Cryobiology 53:310-318
15. Pile LA, Spellman PT, Katzenberger RJ, Wassarman DA (2003) The SIN3 deacetylase complex represses genes encoding mitochondrial proteins: implications for the regulation of energy metabolism. J Biol Chem 278:37840-37848
16. Pyne S, Futcher B, Skiena S (2006) Meta-analysis based on control of false discovery rate: combining yeast ChIP-chip datasets. Bioinformatics 22(20):2516-2522
17. Rider MH, Hussain N, Horman S, Dilworth SM, Storey KB (2006) Stress-induced activation of the AMP-activated protein kinase in the freeze tolerant frog Rana sylvatica. Cryobiology 53:297-309
18. Rountree MR, Bachman KE, Baylin SB (2000) DNMT1 binds HDAC2 and a new co-repressor, DMAP1, to form a complex at replication foci. Nat Genet 25:269-277
19. Sellars MJ, Vuocolo T, Leeton LA, Coman GJ, Degnan BM, Preston NP (2007) Real Time RT-PCR quantification of Kurama shrimp transcripts: a comparison of relative and absolute quantification methods. J Biotechnol 129(3):391-399
20. Storey KB, Storey JM (1990) Metabolic rate depression and biochemical adaptation in anaerobiosis, hibernation and aestivation. Q Rev Biol 65:145-174
21. Symonds BL, James RS, Franklin CE (2007) Getting the jump on skeletal muscle disuse atrophy: preservation of contractile performance in aestivating Cyclorana alboguttata (Gunther 1867). J Exp Biol 210:825-835
22. Tan SH, Reverter A, Wang Y, Byrne KA, McWilliam SM, Lehnert SA (2006) Gene expression profiling of bovine in vitro adipogenesis using a cDNA microarray. Funct Integr Genomics 6(3):235-249
23. Williams DR, Epperson LE, Li W, Hughes MA, Taylor R, Rogers J, Martin SL, Cossins AR, Gracy AY (2005) Seasonally hibernating phenotype assessed though transcript screening. Physiol Genomics 24:13-22