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Volumn 20, Issue 8, 2008, Pages 1899-1927

3D axon structure extraction and analysis in confocal fluorescence microscopy images

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ANIMAL; ARTICLE; AUTOMATED PATTERN RECOGNITION; CENTRAL NERVOUS SYSTEM; COMPUTER PROGRAM; COMPUTER SIMULATION; CONFOCAL MICROSCOPY; HUMAN; IMAGE CYTOMETRY; IMAGE ENHANCEMENT; METHODOLOGY; NERVE FIBER; NERVE TRACT; PHYSIOLOGY; THREE DIMENSIONAL IMAGING; ULTRASTRUCTURE;

EID: 48249144787     PISSN: 08997667     EISSN: 1530888X     Source Type: Journal    
DOI: 10.1162/neco.2008.05-07-519     Document Type: Article
Times cited : (16)

References (39)
  • 7
    • 48249096608 scopus 로고    scopus 로고
    • Available online at
    • Bitplane. (2006). Imaris Software. Available online at http://www.bitplane.com/products/index.shtml.
    • (2006) Imaris Software
  • 8
    • 33748327078 scopus 로고    scopus 로고
    • Repulsive force based snake model to segment and track neuronal axons in 3D microscopy image stacks
    • Cai, H., Xu, X., Lu, J., Lichtman, J., Yung, S. P., & Wong, S. T. C. (2006). Repulsive force based snake model to segment and track neuronal axons in 3D microscopy image stacks. Neurolmage, 32, 1608-1620.
    • (2006) Neurolmage , vol.32 , pp. 1608-1620
    • Cai, H.1    Xu, X.2    Lu, J.3    Lichtman, J.4    Yung, S.P.5    Wong, S.T.C.6
  • 9
    • 0032585839 scopus 로고    scopus 로고
    • Rapid automated tracing and feature extraction from live high-resolution retinal fundus images using direct exploratory algorithms
    • Can, A., Shen, H., Turner, J. N., Tanenbaum, H. L., & Roysam, B. (1999). Rapid automated tracing and feature extraction from live high-resolution retinal fundus images using direct exploratory algorithms. IEEE Transactions on Information Technology in Biomedicine, 3(2), 125-138.
    • (1999) IEEE Transactions on Information Technology in Biomedicine , vol.3 , Issue.2 , pp. 125-138
    • Can, A.1    Shen, H.2    Turner, J.N.3    Tanenbaum, H.L.4    Roysam, B.5
  • 11
    • 0028289552 scopus 로고
    • Automated tracing and volume measurements of neurons from 3-D confocal fluorescence microscopy data
    • Cohen, A. R., Roysam, B., & Turner, J. N. (1994). Automated tracing and volume measurements of neurons from 3-D confocal fluorescence microscopy data. Journal of Microscopy, 173, 103-114.
    • (1994) Journal of Microscopy , vol.173 , pp. 103-114
    • Cohen, A.R.1    Roysam, B.2    Turner, J.N.3
  • 14
    • 50849086322 scopus 로고    scopus 로고
    • Available online at
    • Fiala, J. C. (2006). Reconstruct software. Available online at http://synapses.bu.edu/tools/index.htm.
    • (2006) Reconstruct software
    • Fiala, J.C.1
  • 20
    • 0041530321 scopus 로고    scopus 로고
    • The role of neuronal identity in synaptic competition
    • Kasthuri, H., & Lichtman, J. W. (2003). The role of neuronal identity in synaptic competition. Nature, 424, 426-430.
    • (2003) Nature , vol.424 , pp. 426-430
    • Kasthuri, H.1    Lichtman, J.W.2
  • 21
    • 0035899304 scopus 로고    scopus 로고
    • Asynchronous synapse elimination in neonatal motor units: Studies using GFP transgenic mice
    • Keller-Peck, C. R., Walsh, M. K., Gan, W.-B., Feng, G., Sanes, J. R., & Lichtman, J. W. (2001). Asynchronous synapse elimination in neonatal motor units: Studies using GFP transgenic mice. Neuron, 31, 381-394.
    • (2001) Neuron , vol.31 , pp. 381-394
    • Keller-Peck, C.R.1    Walsh, M.K.2    Gan, W.-B.3    Feng, G.4    Sanes, J.R.5    Lichtman, J.W.6
  • 24
    • 20944434932 scopus 로고    scopus 로고
    • Automated image analysis methods for 3-D quantification of the neurovascular unit from multichannel confocal microscope images
    • Lin, G., Bjornsson, C. S., Smith, K. L., Abdul-Karim, A. M., Turner, J. N., Shain, W., et al. (2005). Automated image analysis methods for 3-D quantification of the neurovascular unit from multichannel confocal microscope images. Cytometry Part A, 66A(1), 9-23.
    • (2005) Cytometry Part A , vol.66 A , Issue.1 , pp. 9-23
    • Lin, G.1    Bjornsson, C.S.2    Smith, K.L.3    Abdul-Karim, A.M.4    Turner, J.N.5    Shain, W.6
  • 26
    • 1942470024 scopus 로고    scopus 로고
    • Design and validation of a tool for neurite tracing and analysis in fluorescence microscopy images
    • Meijering, E., Jacob, M., Sarria, J.-C. F., Steiner, P., Hirling, H., & Unser, M. (2004). Design and validation of a tool for neurite tracing and analysis in fluorescence microscopy images. Cytometry, 58A(2), 167-176.
    • (2004) Cytometry , vol.58 A , Issue.2 , pp. 167-176
    • Meijering, E.1    Jacob, M.2    Sarria, J.-C.F.3    Steiner, P.4    Hirling, H.5    Unser, M.6
  • 27
    • 0018297760 scopus 로고
    • Iterative image transformations for an automatic screening of cervical cancer
    • Meyer, F. (1979). Iterative image transformations for an automatic screening of cervical cancer. Journal of Histochemistry and Cytochemistry, 27, 128-135.
    • (1979) Journal of Histochemistry and Cytochemistry , vol.27 , pp. 128-135
    • Meyer, F.1
  • 30
    • 0018306059 scopus 로고
    • A threshold selection method from gray-level histograms
    • Otsu, N. (1979). A threshold selection method from gray-level histograms. IEEE Transactions on Systems, Man, and Cybernetics, .9(1), 62-66.
    • (1979) IEEE Transactions on Systems, Man, and Cybernetics , vol.9 , Issue.1 , pp. 62-66
    • Otsu, N.1
  • 31
    • 0031987386 scopus 로고    scopus 로고
    • A viewpoint determination system for stenosis diagnosis and quantification in coronary angiographic image acquisition
    • Sato, Y., Araki, T., Hanayama, M., Naito, H., & Tamura, S. (1998). A viewpoint determination system for stenosis diagnosis and quantification in coronary angiographic image acquisition. IEEE Transactions on Medical Imaging, 17, 121-137.
    • (1998) IEEE Transactions on Medical Imaging , vol.17 , pp. 121-137
    • Sato, Y.1    Araki, T.2    Hanayama, M.3    Naito, H.4    Tamura, S.5
  • 32
    • 0032081365 scopus 로고    scopus 로고
    • Three-dimensional multi-scale line filter for segmentation and visualization of curvilinear structures in medical images
    • Sato, Y., Nakajima, S., Shiraga, N., Atsumi, H., Yoshida, S., Koller, T., et al. (1998). Three-dimensional multi-scale line filter for segmentation and visualization of curvilinear structures in medical images. Medical Image Analysis, 2, 143-168.
    • (1998) Medical Image Analysis , vol.2 , pp. 143-168
    • Sato, Y.1    Nakajima, S.2    Shiraga, N.3    Atsumi, H.4    Yoshida, S.5    Koller, T.6
  • 34
    • 0010621560 scopus 로고    scopus 로고
    • Extracting curvilinear structures: A differential geometric approach
    • Paper presented at the, Cambridge, UK
    • Steger, C. (1996). Extracting curvilinear structures: A differential geometric approach. Paper presented at the Fourth European Conference on Computer Vision, Cambridge, UK.
    • (1996) Fourth European Conference on Computer Vision
    • Steger, C.1
  • 38
    • 33745660349 scopus 로고    scopus 로고
    • Marker-controlled watershed for lymphoma segmentation in sequential CT images
    • Yan, J., Zhao, B., Wang, L., Zelenetz, A., & Schwartz, L. H. (2006). Marker-controlled watershed for lymphoma segmentation in sequential CT images. Medical Physics, 33(7), 2452-2460.
    • (2006) Medical Physics , vol.33 , Issue.7 , pp. 2452-2460
    • Yan, J.1    Zhao, B.2    Wang, L.3    Zelenetz, A.4    Schwartz, L.H.5
  • 39
    • 34147198443 scopus 로고    scopus 로고
    • Automated neurite extraction using dynamic programming for high-throughput screening of neuron-based assays
    • Zhang, Y., Zhou, X., Degterev, A., Lipinski, M., Adjeroh, D., Yuan, J., et al. (2007). Automated neurite extraction using dynamic programming for high-throughput screening of neuron-based assays. Neurolmage, 35(4), 1502-1515.
    • (2007) Neurolmage , vol.35 , Issue.4 , pp. 1502-1515
    • Zhang, Y.1    Zhou, X.2    Degterev, A.3    Lipinski, M.4    Adjeroh, D.5    Yuan, J.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.