Model misspecification not the node-density artifact

Evolution

Volumn 62, Issue 8, 2008, Pages 2125-2126

  Venditti, Chris ^a   Pagel, Mark ^a  

^a UNIVERSITY OF READING   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL MODEL; CLASSIFICATION; COMPUTER SIMULATION; EVOLUTION; METHODOLOGY; MOLECULAR EVOLUTION; NOTE; PHYLOGENY; STATISTICAL ANALYSIS; STATISTICAL MODEL;

CLASSIFICATION; COMPUTER SIMULATION; DATA INTERPRETATION, STATISTICAL; EVOLUTION; EVOLUTION, MOLECULAR; MODELS, BIOLOGICAL; MODELS, GENETIC; MODELS, STATISTICAL; PHYLOGENY;

EID: 47749137020     PISSN: 00143820     EISSN: 15585646     Source Type: Journal    
DOI: 10.1111/j.1558-5646.2008.00407.x     Document Type: Note

References (6)

1. Fitch, W. M., and J. J. Beintema. 1990. Correcting parsimonious trees for unseen nucleotide substitutions: the effect of dense branching as exemplified by ribonuclease. Mol. Biol. Evol. 7 : 438 443.
2. Hugall, A. F., and M. S. Y. Lee. 2007. The likelihood node density effect and consequences for evolutionary studies of molecular rates. Evolution 61 : 2293 2307.
3. Pagel, M., C. Venditti, and A. Meade. 2006. Large punctuational contribution of speciation to evolutionary divergence at the molecular level. Science 314 : 119 121.
4. Venditti, C., A. Meade, and M. Pagel. 2006. Detecting the node density artifact in phylogeny reconstruction. Syst. Biol. 55 : 637 644.
5. Venditti, C., A. Meade, and M. Pagel. 2008. Phylogenetic Mixture Models Can Reduce Node-Density Artifacts. Syst. Biol. 58 : 286 293.
6. Webster, A. J., R. J. H. Payne, and M. Pagel. 2003. Molecular phylogenies link rates of evolution and speciation. Science 301 : 478.