Development of a three-dimensional, regional, coupled wave, current, and sediment-transport model

Computers and Geosciences

Volumn 34, Issue 10, 2008, Pages 1284-1306

  Warner, John C ^a   Sherwood, Christopher R ^a   Signell, Richard P ^a   Harris, Courtney K ^b   Arango, Hernan G ^c  

^a U S GEOLOGICAL SURVEY   (United States)

^b VIRGINIA INSTITUTE OF MARINE SCIENCE   (United States)

^c RUTGERS UNIVERSITY   (United States)

Author keywords

Model coupling; Nearshore modeling; Sediment transport; Three dimensional numerical model

Indexed keywords

BOOLEAN FUNCTIONS; EROSION; EVOLUTIONARY ALGORITHMS; FLUID DYNAMICS; FLUID MECHANICS; MINES; MOBILE TELECOMMUNICATION SYSTEMS; MOLECULAR BEAM EPITAXY; MORPHOLOGY; NUMERICAL METHODS; OCEAN CURRENTS; PARALLEL PROCESSING SYSTEMS; RADIATION EFFECTS; SEDIMENT TRANSPORT; SEDIMENTOLOGY; SIZE DISTRIBUTION; SOIL MECHANICS; STRATIGRAPHY; SURFACE PROPERTIES; SURFACE WAVES; THREE DIMENSIONAL; WAVE EQUATIONS; WAVES;

(1 1 0) SURFACE; (ABIOTIC AND BIOTIC) STRESS; (N-1) CRITERION; (PL) PROPERTIES; (SPM) CLASSES; ADVECTION-DIFFUSION; BED LOAD TRANSPORT; BED MORPHOLOGY; BED ROUGHNESS; BULK PROPERTIES; CIRCULATION MODELS; COHESIVE SEDIMENTS; COUPLED MODELING; CRITICAL STRESSES; ELSEVIER (CO); ERODIBILITY; EROSION AND DEPOSITION; EVOLUTION (CO); GRAIN DIAMETER; LAYER THICKNESSES; MOMENTUM EQUATIONS; MULTI LEVEL (ML); NEAR-SHORE; PASSIVE TRACERS; REGIONAL OCEAN MODELING SYSTEM; SETTLING VELOCITIES; SIMULATING WAVES; SUB-MODELS; SURF ZONES; TEST CASES; THREE DIMENSIONAL (3D); THREE DIMENSIONAL (3D) NUMERICAL MODELS; THREE-DIMENSIONAL RADIATION; TRANSPORT ALGORITHMS; TRANSPORT MODELLING; WATER COLUMN (WC); WAVE MODELING; WAVE-CURRENT INTERACTIONS;

SEDIMENTATION;

ADVECTION-DIFFUSION EQUATION; ALGORITHM; DEPOSITION; EROSION; MORPHOLOGY; NEARSHORE DYNAMICS; NUMERICAL MODEL; OCEAN WAVE; OCEANIC CURRENT; SEDIMENT TRANSPORT; SUSPENDED SEDIMENT; THREE-DIMENSIONAL MODELING; WATER COLUMN;

MASSACHUSETTS; MASSACHUSETTS BAY; NORTH AMERICA; UNITED STATES;

EID: 47749118365     PISSN: 00983004     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cageo.2008.02.012     Document Type: Article

References (59)

1. Arakawa A. Computational design for long-term numerical integration of the equations of fluid motion: Two-dimensional incompressible flow. Part I. Journal of Computational Physics 1 (1966) 119-143
2. Ariathurai C.R., and Arulanandan K. Erosion rates of cohesive soils. Journal of Hydraulics Division 104 2 (1978) 279-282
3. Blaas M., Dong C., Marchesiello P., McWilliams J.C., and Stolzenbach K.D. Sediment-transport modeling on Southern Californian Shelves: a ROMS case study. Continental Shelf Research 27 (2005) 832-853
4. Blumberg A.F., Galperin B., and O'Connor D.J. Modeling vertical structure of open-channel flows. Journal of Hydraulic Engineering, ASCE 118 H8 (1992) 1119-1134
5. Booij N., Ris R.C., and Holthuijsen L.H. A third-generation wave model for coastal regions, Part I, Model description and validation. Journal of Geophysical Research 104 C4 (1999) 7649-7666
6. Booij N., Haagsma I.J.G., Holthuijsen L.H., Kieftenburg A.T.M.M., Ris R.C., van der Westhuysen A.J., and Zijlema M. SWAN Cycle III version 40.41 User Manual (2004), Delft University of Technology
7. Casulli V., and Cheng R. Semi-implicit finite difference methods for three-dimensional shallow water flow. International Journal for Numerical Methods in Fluids 15 (1992) 629-648
8. Chassignet E.P., Arango H.G., Dietrich D., Ezer T., Ghil M., Haidvogel D.B., Ma C.-C., Mehra A., Paiva A.M., and Sirkes Z. DAMEE-NAB: the base experiments. Dynamics of Atmospheres and Oceans 32 (2000) 155-183
9. Colella P., and Woodward P. The piecewise parabolic method (PPM) for gas-dynamical simulations. Journal of Computational Physics 54 (1984) 174-201
10. Durski S.M., Glenn S.M., and Haidvogel D.B. Vertical mixing schemes in the coastal ocean: comparison of the level 2.5 Mellor-Yamada scheme with an enhanced version of the K profile parameterization. Journal of Geophysical Research 109 (2004) C01015 10.1029/2002JC001702
11. Fredsøe J., and Deigaard R. Mechanics of coastal sediment transport. In: Liu P.P.L.-F. (Ed). Advanced Series on Ocean Engineering Vol. 3 (1992), World Scientific, Singapore 392
12. Grant W.D., and Madsen O.S. Combined wave and current interaction with a rough bottom. Journal of Geophysical Research 84 C4 (1979) 1797-1808
13. Grant W.D., and Madsen O.S. Movable bed roughness in unsteady oscillatory flow. Journal Geophysical Research 87 C1 (1982) 469-481
14. Haidvogel D.B., Arango H.G., Hedstrom K., Beckmann A., Malanotte-Rizzoli P., and Shchepetkin A.F. Model evaluation experiments in the North Atlantic Basin: Simulations in nonlinear terrain-following coordinates. Dynamics of Atmospheres and Oceans 32 (2000) 239-281
15. Haidvogel D.B., Arango H.G., Budgell W.P., Cornuelle B.D., Curchitser E., Di Lorenzo E., Fennel K., Geyer W.R., Hermann A.J., Lanerolle L., Levin J., McWilliams J.C., Miller A.J., Moore A.M., Powell T.M., Shchepetkin A.F., Sherwood C.R., Signell R.P., Warner J.C., and Wilkin J. Regional Ocean forecasting in terrain-following coordinates: model formulation and skill assessment. Journal of Computational Physics (2007)
16. Harris C.K., and Wiberg P.L. Approaches to quantifying long-term continental shelf sediment transport with an example from the northern California STRESS mid-shelf site. Continental Shelf Research 17 (1997) 1389-1418
17. Harris C.K., and Wiberg P.L. A two-dimensional, time-dependent model of suspended sediment transport and bed reworking for continental shelves. Computers & Geosciences 27 (2001) 675-690
18. Jacob R., Larson J., and Ong E. M x N Communication and parallel interpolation in community climate system model version 3 using the model coupling toolkit. International Journal of High Performance Computing Applications 19 3 (2005) 293-307
19. Jonsson I.C., and Carlsen N.A. Experimental and theoretical investigations in an oscillatory boundary layer. Journal of Hydraulic Research, ASCE 14 1 (1976) 45-60
20. Kantha L.H., and Clayson C.A. An improved mixed layer model for geophysical applications. Journal of Geophysical Research 99 C12 (1994) 25,235-25,266
21. Large W.G., McWilliams J.C., and Doney S.C. A review and model with a nonlocal boundary layer parameterization. Reviews of Geophysics 32 (1994) 363-403
22. Larson J., Jacob R., and Ong E. The model coupling toolkit: a new fortran90 toolkit for building multiphysics parallel coupled models. International Journal of High Performance Computing Applications 8 19 (2005) 277-292
23. Lesser G.R., Roelvink J.A., van Kester J.A.T.M., and Stelling G.S. Development and validation of a three-dimensional morphological model. Coastal Engineering 51 (2004) 883-915
24. Li M.Z., and Amos C.L. SEDTRANS96: the upgraded and better calibrated sediment-transport model for continental shelves. Computers & Geosciences 27 (2001) 619-645
25. Li M., Zhong L., and Boicourt B. Simulation of Chesapeake Bay Estuary: sensitivity to turbulence mixing parameterizations and comparison with hydrographic observations. Journal of Geophysical Research 110 (2005) C12004 10.1029/2004JC002585
26. Liu X.-D., Osher S., and Chan T. Weighted essentially non-oscillatory schemes. Journal of Computational Physics 115 (1994) 200-212
27. Madsen, O.S., 1994. Spectral wave-current bottom boundary layer flows. In: Coastal Engineering 1994. Proceedings of the 24th International Conference on Coastal Engineering Research Council, Kobe, Japan, pp. 384-398.
28. Malarkey J., and Davies A.G. A non-iterative procedure for the Wiberg and Harris (1994) oscillatory sand ripple predictor. Journal of Coastal Research 19 3 (2003) 738-739
29. McWilliams J.C., Restrepo J.M., and Lane E.M. An asymptotic theory for the interaction of waves and currents in coastal waters. Journal of Fluid Mechanics 511 (2004) 135-178
30. Mellor G.L. The three-dimensional current and surface wave equations. Journal of Physical Oceanography 33 (2003) 1978-1989
31. Mellor G.L. Some consequences of the three-dimensional currents and surface wave equations. Journal of Physical Oceanography 35 (2005) 2291-2298
32. Mellor G.L., and Yamada T. Development of a turbulence closure model for geophysical fluid problems. Reviews of Geophysics and Space Physics 20 (1982) 851-875
33. Meyer-Peter, E., Müeller, R., 1948. Formulas for bedload transport. In: Report on the 2nd Meeting International Association Hydraulic Structure Research. Stockholm, Sweden, pp. 39-64.
34. Nielsen P. Suspended sediment concentrations under waves. Coastal Engineering 10 (1986) 23-31
35. Nielsen P. Coastal Bottom Boundary Layers and Sediment Transport. Advanced Series on Ocean Engineering, vol. 4 (1992), World Scientific, Singapore 324pp
36. Phillips O.M. The Dynamics of the Upper Ocean (1969), Cambridge Press, Cambridge
37. Poppe, L.J., Paskevich, V.F., Williams, S.J., Hastings, M.E., Kelly, J.T., Belknap, D.F., Ward, L.G., FitzGerald, D.M., Larsen, P.F., 2003. Surficial sediment data from the Gulf of Maine, Georges Bank, and vicinity: A GIS Compilation. US Geological Survey Open-File Report 03-001, 〈http://pubs.usgs.gov/of/2003/of03-001/index.htm〉.
38. Roelvink J.A. Coastal morphodynamic evolution techniques. Coastal Engineering 53 (2006) 277-287
39. Shchepetkin A.F., and McWilliams J.C. The regional ocean modeling system (ROMS): a split-explicit, free-surface, topography-following-coordinates ocean model. Ocean Modelling 9 (2005) 347-404
40. Sherwood C.R., Harris C.K., Geyer W.R., and Butman B. Toward a community coastal sediment-transport modeling system: Report of the Second Workshop. EOS, Transactions, American Geophysical Union 83 51 (2002)
41. Smith J.D. Modeling of sediment transport on continental shelves. In: Goldberg E.D., McCave I.N., O'Brien J.J., and Steele J.H. (Eds). The Sea Vol. 6 (1977), Wiley-Interscience, New York 539-577
42. Smith J.D., and McLean S.R. Spatially averaged flow over a wavy surface. Journal of Geophysical Research 82 12 (1977) 1735-1746
43. Soulsby R.L. Bed shear-stresses due to combined waves and currents. In: Stive M.J.F. (Ed). Advances in Coastal Morphodynamics: An Overview of the G8-Coastal Morphodynamics Project, Co-Sponsored by the Commission of The European Communities Directorate General XII (1995) pp. 4.20-4.23
44. Soulsby R.L. Dynamics of Marine Sands (1997), Thomas Telford, London 249pp
45. Soulsby R.L., and Damgaard J.S. Bedload sediment transport in coastal waters. Coastal Engineering 52 8 (2005) 673-689
46. Styles R., and Glenn S.M. Modeling stratified wave and current bottom boundary layers on the continental shelf. Journal of Geophysical Research 105 C10 (2000) 24,119-24,139
47. Styles, R., Glenn, S.M., 2002. Modeling bottom roughness in the presence of wave-generated ripples. Journal of Geophysical Research 107(C8), 24/1-24/15, doi:10.1029/2001JC000864.
48. Svendsen I.A. Wave heights and set-up in a surf zone. Coastal Engineering 8 (1984) 303-329
49. Svendsen, I.A., Haas, K., Zhao, Q., 2002. Quasi-3D nearshore circulation model SHORECIRC, User's Manual, Draft Report, Center for Applied Coastal Research, Department of Civil Engineering, University of Delaware, Newark.
50. Umlauf L., and Burchard H. A generic length-scale equation for geophysical turbulence models. Journal of Marine Research 61 (2003) 235-265
51. van Rijn, L.C., 1987. Mathematical modelling of morphological processes in the case of suspended sediment transport. Delft Technical University, Delft Hydraulics Communication No. 382, Delft, The Netherlands.
52. van Rijn L.C. Principles of Sediment Transport in Rivers, Estuaries, and Coastal Seas (1993), Aqua Publications-I11, Amsterdam, The Netherlands 614pp
53. Warner J.C., Sherwood C.R., Arango H.G., and Signell R.P. Performance of four turbulence closure models implemented using a generic length scale method. Ocean Modelling 8 (2005) 81-113
54. Warner, J.C., Perlin, N., Skyllingstad, E. (in press). Using the model coupling toolkit to couple earth system models. Environmental Modelling and Software.
55. Wiberg P.L., and Harris C.K. Ripple geometry in wave-dominated environments. Journal of Geophysical Research 99 C1 (1994) 775-789
56. Wiberg P.L., and Nelson J.M. Unidirectional flow over asymmetric and symmetric ripples. Journal of Geophysical Research 97 C8 (1992) 12,745-12,761
57. Wiberg P.L., and Rubin D.M. Bed roughness produced by saltating sediment. Journal of Geophysical Research 94 C4 (1989) 5011-5016
58. Wiberg, P.L., Sherwood, C.R. (this issue). Calculating wave-generated bottom orbital velocity from surface wave parameters. Computers & Geosciences, doi:10.1016/j.cageo.2008.02.010.
59. Wijesekera H.W., Allen J.S., and Newberger P.A. Modeling study of turbulent mixing over the continental shelf: comparison of turbulent closure schemes. Journal of Geophysical Research 108 C3 (2003) 3103 10.1029/2001JC001234