A PCR-based diagnostic tool for distinguishing grape skin color mutants

Plant Science

Volumn 175, Issue 3, 2008, Pages 402-409

  Giannetto, Sabrina ^a   Velasco, Riccardo ^b   Troggio, Michela ^b   Malacarne, Giulia ^b   Storchi, Paolo ^c   Cancellier, Severina ^a   De Nardi, Barbara ^a   Crespan, Manna ^a  

^a CRA   (Italy)

^b RESEARCH AND INNOVATION CENTRE   (Italy)

^c CRA   (Italy)

Author keywords

Anthocyanin biosynthesis; Bud sports; Chimeras; Quantitative PCR; Vitis vinifera; VvmybA1 gene

Indexed keywords

VITACEAE; VITIS VINIFERA;

EID: 47549114427     PISSN: 01689452     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.plantsci.2008.05.010     Document Type: Article

References (31)

1. Pomar F., Novo M., and Masa A. Varietal differences among the anthocyanin profiles of 50 red table grape cultivars studied by high performance liquid chromatography. J. Chromatogr. A 1094 (2005) 34-41
2. Boss P.K., Davies C., and Robinson S.P. Expression of anthocyanin biosynthesis pathway genes in red and white grapes. Plant Mol. Biol. 32 (1996) 565-569
3. Olmo H.P. The origin and domestication of the Vinifera grape. In: McGovern P.E. (Ed). The Origins and Ancient History of Wine (1995), Gordon and Breach, Amsterdam 31-43
4. Zohary D., and Hopf M. Domestication of Plants in the Old World. 3rd ed. (2000), Oxford University Press, London
5. Galet P. Dictionnaire encyclopedique des cepages (2000), Hachette
6. Sefc K.M., Lefort F., Grando M.S., Scott K., Steinkellner H., and Thomas M.R. Microsatellite markers for grapevine: a state of the art. In: Roubelakis-Angelakis K.A. (Ed). Molecular Biology and Biotechnology of Grapevine (2001), Kluwer Publishers, Amsterdam 407-438
7. This P., Lacombe T., Laucou V., Siret R., Moreau F., and Vares D. Grape and Wine varietal authentication by DNA analysis. In: Ebeler S. (Ed). Food and Wine authentication, ACS Symposium Series, ACS. Washigton, DC (2006) 207-228
8. Imazio S., Labra M., Grassi F., Winfield M., Bardini M., and Scienza A. Molecular tools for clone identification: the case of the grapevine cultivar "Traminer". Plant Breed. 121 (2002) 531-535
9. Sparvoli F., Martin C., Scienza A., Gavazzi G., and Tonelli C. Cloning and molecular analysis of structural genes involved in flavonoid and stilbene biosynthesis in grape (Vitis vinifera L.). Plant Mol. Biol. 24 (1994) 743-755
10. Boss P.K., Davies C., and Robinson S.P. Anthocyanin composition and anthocyanin pathway gene expression in grapevine sports differing in berry skin colour. Aust. J. Grape Wine Res. 2 (1996) 163-170
11. Boss P.K., Davies C., and Robinson S.P. Analysis of the expression of anthocyanin pathway genes in developing Vitis vinifera L. cv Shiraz grape berries and the implications for pathway regulation. Plant Physiol. 111 (1996) 1059-1066
12. Kobayashi S., Ishimaru M., Ding C.K., Yakushiji H., and Goto N. Comparison of UDP-glucose:flavonoid 3-O-glucosyltransferase (UFGT) gene sequences between white grapes (Vitis vinifera) and their sports with red skin. Plant Sci. 160 (2001) 543-550
13. Kobayashi S., Ishimaru M., Hiraoka K., and Honda C. Myb-related genes of the Kyoho grape (Vitis labruscana) regulate anthocyanin biosynthesis. Planta 215 (2002) 924-933
14. Kobayashi S., Goto-Yamamoto N., and Hirochika H. Retrotransposon-induced mutations in grape skin color. Science 304 (2004) p982
15. Jeong S.T., Goto-Yamamoto N., Kobayashi S., and Esaka M. Effects of plant hormones and shading on the accumulation of anthocyanins and the expression of anthocyanin biosynthetic genes in grape berry skins. Plant Sci. 167 (2004) 247-252
16. Kobayashi S., Goto-Yamamoto N., and Hirochika H. Association of VvmybA1 gene expression with anthocyanin production in grape (Vitis vinifera) skin-color mutants. J. Jpn. Soc. Hortic. Sci. 74 3 (2005) 196-203
17. Yakushiji H., Kobayashi S., Goto-Yamamoto N., Jeong S.T., Sueta T., Mitani N., and Azuma A. A skin color mutation of grapevine, from black-skinned Pinot noir to white-skinned Pinot blanc, is caused by deletion of the functional VvmybA1 allele. Biosci. Biotechnol. Biochem. 70 6 (2006) 1506-1508
18. Lijavetzky D., Ruiz-García L., Cabezas J.A., De Andrés M.T., Bravo G., Ibáñez A., Carreño J., Cabello F., Ibáñez J., and Martínez-Zapater J.M. Molecular genetics of berry colour variation in table grape. Mol. Gen. Genomics 276 (2006) 427-435
19. This P., Lacombe T., Cadle-Davidson M., and Owens C.L. Wine grape (Vitis vinifera L.) color associates with allelic variation in the domestication gene VvmybA1. Theor. Appl. Genet. 114 (2007) 723-730
20. Walker A.R., Lee E., Bogs J., McDavid D.A.J., Thomas M.R., and Robinson S.P. White grapes arose through the mutation of two similar and adjacent regulatory genes. Plant J. 49 (2007) 772-785
21. Thomas M.R., and Scott N.S. Microsatellite repeats in grapevine reveal DNA polymorphisms when analysed as sequence-tagged sites (STSs). Theor. Appl. Genet. 86 (1993) 985-990
22. Bowers J.E., Dangl G.S., Vignani R., and Meredith C.P. Isolation and characterisation of the new polymorphic simple sequence repeat loci in grape (Vitis vinifera L.). Genome 39 (1996) 628-633
23. Bowers J.E., Dangl G.S., and Meredith C.P. Development and characterisation of additional microsatellite DNA markers for grape. Am. J. Enol. Vitic. 50 (1999) 243-246
24. Sefc M.K., Regner F., Turetschek E., Glössl J., and Steinkellner H. Identification of microsatellite sequences in Vitis riparia and their applicability for genotyping of different Vitis species. Genome 42 (1999) 367-373
25. Crespan M. The parentage of Muscat of Hamburg. Vitis 42 (2003) 193-197
26. Crespan M., Botta R., and Milani N. Molecular characterization of twenty seeded and seedless table cultivars (Vitis vinifera L.). Vitis 38 (1999) 87-92
27. Salmaso M., Faes G., Segala C., Stefanini M., Salakhutdinov I., Zyprian E., Toepfer R., Grando M.S., and Velasco R. Genome diversity and gene haplotypes in the grapevine (Vitis vinifera L.), as revealed by single nucleotide polymorphisms. Mol. Breed. 14 (2004) 385-395
28. Sanguinetti C.J., Dias Neto E., and Simpson A.J. Rapid silver staining and recovery of PCR products separated on polyacrylamide gels. Biotechniques 17 (1994) 914-921
29. Staden R., Beal K.F., and Bonfield J.K. The Staden Package, 1998. Methods Mol. Biol. 132 (2000) 115-130
30. Walker A.R., Lee E., and Robinson S.P. Two new grape cultivars, bud sports of Cabernet Sauvignon bearing pale-coloured berries, are the result of deletion of two regulatory genes of the berry colour locus. Plant Mol. Biol. 62 (2006) 623-635
31. Hocquigny S., Pelsy F., Dumas V., Kindt S., Heloir M.-C., and Merdinoglu D. Diversification within grapevine cultivars goes through chimeric states. Genome 47 (2004) 579-589