The poisson-boltzmann model for tRNA: Assessment of the calculation set-up and ionic concentration cutoff

Journal of Computational Chemistry

Volumn 29, Issue 12, 2008, Pages 1970-1981

  Gruziel, Magdalena ^a,b   Grochowski, Pawel ^a   Trylska, Joanna ^a  

^a UNIVERSITY OF WARSAW   (Poland)

^b UNIVERSITY OF WARSAW   (Poland)

Author keywords

Electrostatic free energy; Electrostatic potential; Finite size of ions; Poisson boltzmann equation; Similarity index

Indexed keywords

ACIDS; BOLTZMANN EQUATION; CONCENTRATION (PROCESS); ELECTROLYSIS; ELECTROSTATICS; IONIC STRENGTH; IONIZATION OF LIQUIDS; LINEAR EQUATIONS; MOLECULES; NONLINEAR EQUATIONS; NUCLEIC ACIDS; POISSON DISTRIBUTION;

CHARGED SYSTEMS; CONCENTRATION (COMPOSITION); DIVALENT IONS; ELECTROSTATIC FREE ENERGY; ELECTROSTATIC POTENTIAL (ESP); ELECTROSTATIC PROPERTIES; FINITE SIZE; IONIC CONCENTRATIONS; IONIC DISTRIBUTION; LINEAR APPROXIMATIONS; MOBILE IONS; NONLINEAR POISSON-BOLTZMANN EQUATION (NPBE); POISSON BOLTZMANN (PB); POISSON BOLTZMANN EQUATION (PBE); ROOT MEAN SQUARE DEVIATION (RMSD); STRENGTH (IGC: D5/D6); WATER MOLECULES;

POISSON EQUATION;

ION; SOLVENT; TRANSFER RNA; WATER;

ARTICLE; CHEMISTRY; ELECTRICITY; OSMOLARITY;

ELECTROSTATICS; IONS; OSMOLAR CONCENTRATION; RNA, TRANSFER; SOLVENTS; WATER;

EID: 47549101415     PISSN: 01928651     EISSN: 1096987X     Source Type: Journal    
DOI: 10.1002/jcc.20953     Document Type: Article

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