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Volumn 58, Issue 4, 2008, Pages 992-997

Rubritalea sabuli sp. nov., a carotenoid- and squalene-producing member of the family Verrucomicrobiaceae, isolated from marine sediment

Author keywords

[No Author keywords available]

Indexed keywords

CAROTENOID; CYTOSINE; DIAMINOPIMELIC ACID; FATTY ACID; GUANINE; MENAQUINONE; MURAMIC ACID; PEPTIDOGLYCAN; RNA 16S; SQUALENE; BACTERIAL DNA; BACTERIAL RNA; FARNOQUINONE;

EID: 47249131220     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.65540-0     Document Type: Article
Times cited : (28)

References (28)
  • 1
    • 5444248493 scopus 로고    scopus 로고
    • Akkermansia muciniphila gen. nov., sp. nov., a human intestinal mucin-degrading bacterium
    • Derrien, M., Vaughan, E. E., Plugge, C. M. & de Vos, W. M. (2004). Akkermansia muciniphila gen. nov., sp. nov., a human intestinal mucin-degrading bacterium. Int J Syst Evol Microbiol 54, 1469-1476.
    • (2004) Int J Syst Evol Microbiol , vol.54 , pp. 1469-1476
    • Derrien, M.1    Vaughan, E.E.2    Plugge, C.M.3    de Vos, W.M.4
  • 2
    • 0024358339 scopus 로고
    • Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains
    • Ezaki, T., Hashimoto, Y. & Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39, 224-229.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 224-229
    • Ezaki, T.1    Hashimoto, Y.2    Yabuuchi, E.3
  • 3
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 4
    • 84959747425 scopus 로고
    • Toward defining the course of evolution: Minimum change for a specific tree topology
    • Fitch, W. M. (1971). Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20, 406-416.
    • (1971) Syst Zool , vol.20 , pp. 406-416
    • Fitch, W.M.1
  • 5
    • 0018414874 scopus 로고
    • Two-dimensional thin-layer chromatography for amino acid analysis of bacterial cell walls
    • Harper, J. J. & Davis, G. H. G. (1979). Two-dimensional thin-layer chromatography for amino acid analysis of bacterial cell walls. Int J Syst Bacteriol 29, 56-58.
    • (1979) Int J Syst Bacteriol , vol.29 , pp. 56-58
    • Harper, J.J.1    Davis, G.H.G.2
  • 6
    • 0029799964 scopus 로고    scopus 로고
    • Phylogeny of Prosthecobacter, the fusiform caulobacters: Members of a recently discovered division of the Bacteria
    • Hedlund, B. P., Gosink, J. J. & Staley, J. T. (1996). Phylogeny of Prosthecobacter, the fusiform caulobacters: members of a recently discovered division of the Bacteria. Int J Syst Bacteriol 46, 960-966.
    • (1996) Int J Syst Bacteriol , vol.46 , pp. 960-966
    • Hedlund, B.P.1    Gosink, J.J.2    Staley, J.T.3
  • 7
    • 0030778930 scopus 로고    scopus 로고
    • Verrucomicrobia div. nov., a new division of the bacteria containing three new species of Prosthecobacter
    • Hedlund, B. P., Gosink, J. J. & Staley, J. T. (1997). Verrucomicrobia div. nov., a new division of the bacteria containing three new species of Prosthecobacter. Antonie van Leeuwenhoek 72, 29-38.
    • (1997) Antonie van Leeuwenhoek , vol.72 , pp. 29-38
    • Hedlund, B.P.1    Gosink, J.J.2    Staley, J.T.3
  • 8
    • 0031662188 scopus 로고    scopus 로고
    • Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity
    • Hugenholtz, P., Goebel, B. M. & Pace, N. R. (1998). Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity. J Bacteriol 180, 4765-4774.
    • (1998) J Bacteriol , vol.180 , pp. 4765-4774
    • Hugenholtz, P.1    Goebel, B.M.2    Pace, N.R.3
  • 12
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar, S., Tamura, K. & Nei, M. (2004). MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5, 150-163.
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 13
    • 85010439719 scopus 로고
    • A procedure for the isolation of deoxyribonucleic acid from micro-organisms
    • Marmur, J. (1961). A procedure for the isolation of deoxyribonucleic acid from micro-organisms. J Mol Biol 3, 208-218.
    • (1961) J Mol Biol , vol.3 , pp. 208-218
    • Marmur, J.1
  • 14
    • 0000198211 scopus 로고
    • Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography
    • Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 159-167
    • Mesbah, M.1    Premachandran, U.2    Whitman, W.B.3
  • 15
    • 0002435103 scopus 로고
    • Determinative and cytological light microscopy
    • Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology
    • Murray, R. G. E., Doetsch, R. N. & Robinow, C. F. (1994). Determinative and cytological light microscopy. In Methods for General and Molecular Bacteriology, pp. 21-41. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
    • (1994) Methods for General and Molecular Bacteriology , pp. 21-41
    • Murray, R.G.E.1    Doetsch, R.N.2    Robinow, C.F.3
  • 16
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 18
    • 0015462556 scopus 로고
    • Peptidoglycan types of bacterial cell walls and their taxonomic implications
    • Schleifer, K. H. & Kandler, O. (1972). Peptidoglycan types of bacterial cell walls and their taxonomic implications. Bacteriol Rev 36, 407-477.
    • (1972) Bacteriol Rev , vol.36 , pp. 407-477
    • Schleifer, K.H.1    Kandler, O.2
  • 19
    • 0023473336 scopus 로고
    • Verrucomicrobium spinosum gen. nov., sp. nov.: A fimbriated prosthecate bacterium
    • Schlesner, H. (1987). Verrucomicrobium spinosum gen. nov., sp. nov.: a fimbriated prosthecate bacterium. Syst Appl Microbiol 10, 54-56.
    • (1987) Syst Appl Microbiol , vol.10 , pp. 54-56
    • Schlesner, H.1
  • 21
    • 0016909999 scopus 로고
    • Prosthecobacter fusiformis nov. gen. et sp., the fusiform caulobacter
    • Staley, J. T., Bont, J. A. M. & Jonge, K. (1976). Prosthecobacter fusiformis nov. gen. et sp., the fusiform caulobacter. Antonie van Leeuwenhoek 42, 333-342.
    • (1976) Antonie van Leeuwenhoek , vol.42 , pp. 333-342
    • Staley, J.T.1    Bont, J.A.M.2    Jonge, K.3
  • 22
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 24
    • 0026067797 scopus 로고
    • 16S ribosomal DNA amplification for phylogenetic study
    • Weisburg, W. G., Barns, S. M., Pelletier, D. A. & Lane, D. J. (1991). 16S ribosomal DNA amplification for phylogenetic study. J Bacteriol 173, 697-703.
    • (1991) J Bacteriol , vol.173 , pp. 697-703
    • Weisburg, W.G.1    Barns, S.M.2    Pelletier, D.A.3    Lane, D.J.4
  • 25
    • 0027500450 scopus 로고
    • Kineococcus aurantiacus gen. nov., sp. nov., a new aerobic, gram-positive, motile coccus with diaminopimelic acid and arabinogalactan in the cell wall
    • Yokota, A., Tamura, T., Nishii, T. & Hasegawa, T. (1993). Kineococcus aurantiacus gen. nov., sp. nov., a new aerobic, gram-positive, motile coccus with diaminopimelic acid and arabinogalactan in the cell wall. Int J Syst Bacteriol 43, 52-57.
    • (1993) Int J Syst Bacteriol , vol.43 , pp. 52-57
    • Yokota, A.1    Tamura, T.2    Nishii, T.3    Hasegawa, T.4
  • 26
    • 34547406175 scopus 로고    scopus 로고
    • Pelagicoccus mobilis gen. nov., sp. nov., Pelagicoccus albus sp. nov. and Pelagicoccus litoralis sp. nov., three novel members of subdivision 4 within the phylum 'Verrucomicrobia' isolated from seawater by in situ cultivation
    • Yoon, J., Yasumoto-Hirose, M., Matsuo, Y., Nozawa, M., Matsuda, S., Kasai, H. & Yokota, A. (2007a). Pelagicoccus mobilis gen. nov., sp. nov., Pelagicoccus albus sp. nov. and Pelagicoccus litoralis sp. nov., three novel members of subdivision 4 within the phylum 'Verrucomicrobia' isolated from seawater by in situ cultivation. Int J Syst Evol Microbiol 57, 1377-1385.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 1377-1385
    • Yoon, J.1    Yasumoto-Hirose, M.2    Matsuo, Y.3    Nozawa, M.4    Matsuda, S.5    Kasai, H.6    Yokota, A.7
  • 27
    • 35648977550 scopus 로고    scopus 로고
    • Rubritalea spongiae sp. nov. and Rubritalea tangerina sp. nov., two carotenoid- and squalene-producing marine bacteria of the family Verrucomicrobiaceae within the phylum 'Verrucomicrobia' isolated from marine animals
    • Yoon, J., Matsuo, Y., Matsuda, S., Adachi, K., Kasai, H. & Yokota, A. (2007b). Rubritalea spongiae sp. nov. and Rubritalea tangerina sp. nov., two carotenoid- and squalene-producing marine bacteria of the family Verrucomicrobiaceae within the phylum 'Verrucomicrobia' isolated from marine animals. Int J Syst Evol Microbiol 57, 2337-2343.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 2337-2343
    • Yoon, J.1    Matsuo, Y.2    Matsuda, S.3    Adachi, K.4    Kasai, H.5    Yokota, A.6
  • 28
    • 47249084286 scopus 로고    scopus 로고
    • Yoon, J., Matsuo, Y., Adachi, K., Nozawa, M., Matsuda, S., Kasai, H. & Yokota, A. (2008). Description of Persicirhabdus sediminis gen. nov., sp. nov., Roseibacillus ishigakijimensis gen. nov., sp. nov., Roseibacillus ponti sp. nov., Roseibacillus persicicus sp. nov., Luteolibacter pohnpeiensis gen. nov., sp. nov. and Luteolibacter algae sp. nov., six marine members of the phylum 'Verrucomicrobia', and emended descriptions of the class Verrucomicrobiae, the order Verrucomicrobiales and the family Verrucomicrobiaceae. Int J Syst Evol Microbiol 58, 998-1007.
    • Yoon, J., Matsuo, Y., Adachi, K., Nozawa, M., Matsuda, S., Kasai, H. & Yokota, A. (2008). Description of Persicirhabdus sediminis gen. nov., sp. nov., Roseibacillus ishigakijimensis gen. nov., sp. nov., Roseibacillus ponti sp. nov., Roseibacillus persicicus sp. nov., Luteolibacter pohnpeiensis gen. nov., sp. nov. and Luteolibacter algae sp. nov., six marine members of the phylum 'Verrucomicrobia', and emended descriptions of the class Verrucomicrobiae, the order Verrucomicrobiales and the family Verrucomicrobiaceae. Int J Syst Evol Microbiol 58, 998-1007.


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