Lactobacillus sobrius Konstantinov et al. 2006 is a later synonym of Lactobacillus amylovorus Nakamura 1981

International Journal of Systematic and Evolutionary Microbiology

Volumn 58, Issue 4, 2008, Pages 910-913

  Jakava Viljanen, Miia ^a,b   Murros, Anna ^b   Palva, Airi ^b   Björkroth, Katri Johanna ^b  

^a NATL VET AND FOOD RES INSTITUTE   (Finland)

^b UNIVERSITY OF HELSINKI   (Finland)

Author keywords

[No Author keywords available]

Indexed keywords

PHENYLALANINE TRANSFER RNA; RIBOSOME RNA; RNA 16S; RNA POLYMERASE; TYPE II SITE SPECIFIC DEOXYRIBONUCLEASE; BACTERIAL DNA; DNA DIRECTED RNA POLYMERASE; PHENYLALANINE TRANSFER RNA LIGASE; RNA POLYMERASE ALPHA SUBUNIT;

ARTICLE; BACTERIAL STRAIN; BACTERIUM ISOLATE; CLUSTER ANALYSIS; DNA DNA HYBRIDIZATION; FECES; FINLAND; GENE SEQUENCE; HOUSEKEEPING GENE; INTESTINE; LACTIC ACID BACTERIUM; LACTOBACILLUS; LACTOBACILLUS AMYLOVORUS; LACTOBACILLUS SOBRIUS; MULTILOCUS SEQUENCE TYPING; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; SWINE; TAXONOMY; ANIMAL; BACTERIAL GENE; CLASSIFICATION; GENETICS; ISOLATION AND PURIFICATION; MICROBIOLOGY; MOLECULAR GENETICS; NOMENCLATURE; NUCLEIC ACID HYBRIDIZATION; RIBOTYPING; SPECIES DIFFERENCE;

BACTERIA (MICROORGANISMS); LACTOBACILLUS AMYLOVORUS; LACTOBACILLUS SOBRIUS; SUS;

ANIMALS; DNA, BACTERIAL; DNA-DIRECTED RNA POLYMERASES; FINLAND; GENES, BACTERIAL; LACTOBACILLUS; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; PHENYLALANINE-TRNA LIGASE; PHYLOGENY; RIBOTYPING; SPECIES SPECIFICITY; SUS SCROFA; TERMINOLOGY AS TOPIC;

EID: 47249114865     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.65432-0     Document Type: Article

References (17)

1. Björkroth, K. J. & Korkeala, H. J. (1996). Evaluation of Lactobacillus sakei contamination in vacuum-packaged sliced cooked meat products by ribotyping. J Food Prot 59, 398-401.
2. De Ley, J., Cattoir, H. & Reynaerts, A. (1970). Quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12, 133-142.
3. Fujisawa, T., Benno, Y., Yaeshima, T. & Mitsuoka, T. (1992). Taxonomic study of the Lactobacillus acidophilus group, with recognition of Lactobacillus gallinarum sp. nov. and Lactobacillus johnsonii sp. nov. and synonymy of Lactobacillus acidophilus group A3 (Johnson et al. 1980) with the type strain of Lactobacillus amylovorus (Nakamura 1981). Int J Syst Bacteriol 42, 487-491.
4. Gillis, M., De Ley, J. & De Cleene, M. (1970). The determination of molecular weight of bacterial genome DNA from renaturation rates. Eur J Biochem 12, 143-153.
5. Huß, V. A. R., Festl, H. & Schleifer, K. H. (1983). Studies on the spectrophotometric determination of DNA hybridization from renaturation rates. Syst Appl Microbiol 4, 184-192.
6. Hutton, J. R. (1977). Renaturation kinetics and thermal stability of DNA in aqueous solutions of formamide and urea. Nucleic Acids Res 4, 3537-3555.
7. Jakava-Viljanen, M. & Palva, A. (2007). Characterization of Lactobacillus species carrying surface (S) layer protein isolated from porcine intestine and faeces and their adhesion to different host tissues. Vet Microbiol 124, 264-273.
8. Johnson, J. L., Phelps, C. F., Cummins, C. S., London, J. & Gasser, F. (1980). Taxonomy of the Lactobacillus acidophilus group. Int J Syst Bacteriol 30, 53-68.
9. Konstantinov, S. R., Poznanski, E., Fuentes, S., Akkermans, A. D., Smidt, H. & de Vos, W. M. (2006). Lactobacillus sobrius sp. nov., abundant in the intestine of weaning piglets. Int J Syst Evol Microbiol 56, 29-32.
10. Lapage, S. P., Sneath, P. H. A., Lessel, E. F., Skerman, V. B. D., Seelinger, H. P. R. & Clark, W. A. (editors) (1992). International Code of Nomenclature of Bacteria (1990 Revision). Bacteriological Code. Washington, DC: American Society for Microbiology.
11. Lauer, E., Helming, C. & Kandler, O. (1980). Heterogeneity of the species Lactobacillus acidophilus (Moro) Hansen and Mocquot as revealed by biochemical characteristics and DNA-DNA hybridization. Zentralbl Bakteriol Mikrobiol Hyg 1 Abt Orig C 1, 150-168.
12. Nakamura, L. K. (1981). Lactobacillus amylovorus, a new starch-hydrolyzing species from cattle waste-corn fermentations. Int J Syst Bacteriol 31, 56-63.
13. Naser, S. M. (2006). A novel robust identification system of the lactic acid bacteria Enterococcus, Lactobacillus and Streptococcus based on pheS, rpoA and atpA multilocus sequence analysis. PhD thesis, Ghent University, Belgium.
14. Naser, S. M., Thompson, F. L., Hoste, B., Gevers, D., Dawyndt, P., Vancanneyt, M. & Swings, J. (2005). Application of multilocus sequence analysis (MLSA) for rapid identification of Enterococcus species based on rpoA and pheS genes. Microbiology 151, 2141-2150.
15. Naser, S. M., Vancanneyt, M., Snauwaert, C., Vrancken, G., Hoste, B., De Vuyst, L. & Swings, J. (2006). Reclassification of Lactobacillus amylophilus LMG 11400 and NRRL B-4435 as Lactobacillus amylotrophicus sp. nov. Int J Syst Evol Microbiol 56, 2523-2527.
16. Pitcher, D. G., Saunders, N. A. & Owen, R. J. (1989). Rapid extraction of bacterial genomic DNA with guanidium thiocyanate. Lett Appl Microbiol 8, 151-156.
17. Ryu, C. S., Czajka, J. W., Sakamoto, M. & Benno, Y. (2001). Characterization of the Lactobacillus casei group and the Lactobacillus acidophilus group by automated ribotyping. Microbiol Immunol 45, 271-275.