Asaccharobacter celatus gen. nov., sp. nov., isolated from rat caecum

International Journal of Systematic and Evolutionary Microbiology

Volumn 58, Issue 5, 2008, Pages 1238-1240

  Minamida, Kimiko ^a   Ota, Kyohei ^a   Nishimukai, Megumi ^a   Tanaka, Michiko ^a   Abe, Ayumi ^a   Sone, Teruo ^a   Tomita, Fusao ^a   Hara, Hiroshi ^a   Asano, Kozo ^a  

^a HOKKAIDO UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ARGININE; BACTERIAL DNA; CARBOHYDRATE; CYTOSINE; DIAMINOPIMELIC ACID; FATTY ACID; GLUCOSE; GUANINE; MENAQUINONE; QUINONE DERIVATIVE; RNA 16S; UBIQUINONE; RIBOSOME DNA;

ANAEROBIC BACTERIUM; ANIMAL TISSUE; ARTICLE; ASACCHAROBACTER CELATUS; BACTERIAL CELL; BACTERIAL STRAIN; BACTERIUM ISOLATION; CARBOHYDRATE METABOLISM; CECUM; CORIOBACTERIACEAE; DENITROBACTERIUM; DNA CONTENT; EGGERTHELLA; GLUCOSE METABOLISM; GRAM POSITIVE BACTERIUM; NEW GENUS; NEW SPECIES; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PHYLOGENY; PRIORITY JOURNAL; RAT; RNA SEQUENCE; ANIMAL; BACTERIUM IDENTIFICATION; CLASSIFICATION; DNA BASE COMPOSITION; DNA SEQUENCE; GENETICS; GENOTYPE; GRAM POSITIVE ASPOROGENOUS ROD-SHAPED BACTERIA; ISOLATION AND PURIFICATION; MICROBIOLOGY; MOLECULAR GENETICS; PHYSIOLOGY; RNA GENE; SPECIES DIFFERENCE;

BACTERIA (MICROORGANISMS); CORIOBACTERIACEAE; DENITROBACTERIUM; EGGERTHELLA; POSIBACTERIA; RATTUS;

ANIMALS; BACTERIA, ANAEROBIC; BACTERIAL TYPING TECHNIQUES; BASE COMPOSITION; CECUM; DNA, BACTERIAL; DNA, RIBOSOMAL; GENES, RRNA; GENOTYPE; GRAM-POSITIVE RODS; MOLECULAR SEQUENCE DATA; PHENOTYPE; PHYLOGENY; RATS; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SPECIES SPECIFICITY;

EID: 47049093561     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.64894-0     Document Type: Article

References (23)

1. Anderson, R. C., Rasmussen, M. A., Jensen, N. S. & Allison, M. J. (2000). Denitrobacterium detoxificans gen. nov., sp. nov., a ruminal bacterium that respires on nitrocompounds. Int J Syst Evol Microbiol 50, 633-638.
2. Collins, M. D. & Wallbanks, S. (1992). Comparative sequence analyses of the 16S rRNA genes of Lactobacillus minutus, Lactobacillus rimae and Streptococcus parvulus: proposal for the creation of a new genus Atopobium. FEMS Microbiol Lett 74, 235-240.
3. Dewhirst, F. E., Paster, B. J., Tzellas, N., Coleman, B., Downes, J., Spratt, D. A. & Wada, W. G. (2001). Characterization of novel human oral isolates and cloned 16S rDNA sequences that fall in the family Coriobacteriaceae: description of Olsenella gen. nov., reclassification of Lactobacillus uli as Olsenella uli comb. nov. and description of Olsenella profusa sp. nov. Int J Syst Evol Microbiol 51, 1797-1804.
4. Haas, F. & König, H. (1988). Coriobacterium glomerans gen. nov., sp. nov. from the intestinal tract of the red soldier bug. Int J Syst Bacteriol 38, 382-384.
5. Holdeman, L. V., Cato, E. P. & Moore, W. E. C. (1977). Anaerobe Laboratory Manual, 4th edn. Blacksburg, VA: Virginia Polytechnic Institute and State University.
6. Kageyama, A. & Benno, Y. (2000). Emendation of genus Collinsella and proposal of Collinsella stercoris sp. nov. and Collinsella intestinalis sp. nov. Int J Syst Evol Microbiol 50, 1767-1774.
7. Kageyama, A., Benno, Y. & Nakase, T. (1999). Phylogenetic evidence for the transfer of Eubacterium lentum to the genus Eggerthella as Eggerthella lenta gen. nov., comb. nov. Int J Syst Bacteriol 49, 1725-1732.
8. Komagata, K. & Suzuki, K. (1987). Lipid and cell-wall analysis in bacterial systematics. Methods Microbiol 19, 161-207.
9. Kuykendall, L. D., Roy, M. A., O'Neill, J. J. & Devine, T. E. (1988). Fatty acids, antibiotic resistance, and deoxyribonucleic acid homology groups of Bradyrhizobium japonicum. Int J Syst Bacteriol 38, 358-361.
10. Lau, S. K., Woo, P. C., Woo, G. K., Fung, A. M., Wong, M. K., Chan, K. M., Tam, D. M. & Yuen, K. Y. (2004). Eggerthella hongkongensis sp. nov. and Eggerthella sinensis sp. nov., two novel Eggerthella species, account for half of the cases of Eggerthella bacteremia. Diagn Microbiol Infect Dis 49, 255-263.
11. Miller, L. T. (1982). Single derivatization method for routine analysis of bacterial whole-cell fatty acid methyl esters, including hydroxy acids. J Clin Microbiol 16, 584-586.
12. Minamida, K., Tanaka, M., Abe, A., Sone, T., Tomita, F., Hara, H. & Asano, K. (2006a). Production of equol from daidzein by a gram-positive rod bacterium isolated from rat intestine. J Biosci Bioeng 102, 247-250.
13. Minamida, K., Asakawa, C., Sujaya, I. N., Kaneko, M., Abe, A., Sone, T., Hara, H., Asano, K. & Tomita, F. (2006b). Effects of long-term ingestion of difructose anhydride III (DFA III) on intestinal bacteria and bile acid metabolism in humans. J Biosci Bioeng 101, 149-156.
14. Moore, W. E. C. & Holdeman-Moore, L. V. (1986). Genus Eubacterium Prévot 1938. In Bergey's Manual of Systematic Bacteriology, vol. 2, pp. 1353-1373. Edited by P. H. A. Sneath, N. S. Mair, M. E. Sharpe & J. G. Holt. Baltimore: Williams & Wilkins.
15. Nakazawa, F., Poco, S. E., Ikeda, T., Sato, M., Kalfas, S., Sundqvist, G. & Hoshino, E. (1999). Cryptobacterium curtum gen. nov., sp. nov., a new genus of gram-positive anaerobic rod isolated from human oral cavities. Int J Syst Bacteriol 49, 1193-1200.
16. Nishijima, M., Araki-Sakai, M. & Sano, H. (1997). Identification of isoprenoid quinones by frit-FAB liquid chromatography-mass spectrometry for the chemotaxonomy of microorganisms. J Microbiol Methods 28, 113-122.
17. Nishimukai, M., Hara, H. & Aoyama, Y. (2003). Enteral administration of soybean lecithin enhanced lymphatic absorption of triacylglycerol in rats. Br J Nutr 90, 565-571.
18. Saito, H. & Miura, K. (1963). Preparation of transforming deoxyribonucleic acid by phenol treatment. Biochim Biophys Acta 72, 619-629.
19. Schleifer, K. H. & Kandler, O. (1972). Peptidoglycan types of bacterial cell walls and their taxonomic implications. Bacteriol Rev 36, 407-477.
20. Stackebrandt, E., Rainey, F. A. & Ward-Rainey, N. L. (1997). Proposal for a new hierarchic classification system, Actinobacteria classis nov. Int J Syst Bacteriol 47, 479-491.
21. Tamaoka, J. & Komagata, K. (1984). Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25, 125-128.
22. Wade, W. G., Downes, J., Dymock, D., Hiom, S. J., Weightman, A. J., Dewhirst, F. E., Paster, B. J., Tzellas, N. & Coleman, B. (1999). The family Coriobacteriaceae: reclassification of Eubacterium exiguum (Poco et al. 1996) and Peptostreptococcus heliotrinreducens (Lanigan 1976) as Slackia exigua gen. nov., comb. nov. and Slackia heliotrinireducens gen. nov., comb. nov., and Eubacterium lentum (Prevot 1938) as Eggerthella lenta gen. nov., comb. nov. Int J Syst Bacteriol 49, 595-600.
23. Wang, X. L., Hur, H. G., Lee, J. H., Kim, K. T. & Kim, S. I. (2005). Enantioselective synthesis of S-equol from dihydrodaidzein by a newly isolated anaerobic human intestinal bacterium. Appl Environ Microbiol 71, 214-219.