-
1
-
-
0034807812
-
Xenophilus azovorans gen. nov., sp. nov., a soil bacterium that is able to degrade azo dyes of the Orange II type
-
2001
-
Blümel, S., Busse, H.-J., Stolz, A. & Kämpfer, P. (2001). Xenophilus azovorans gen. nov., sp. nov., a soil bacterium that is able to degrade azo dyes of the Orange II type. Int J Syst Evol Microbiol 5l, 1831-1837.
-
(1831)
Int J Syst Evol Microbiol
, vol.5 l
-
-
Blümel, S.1
Busse, H.-J.2
Stolz, A.3
Kämpfer, P.4
-
2
-
-
84887070146
-
Polyamine pattern as a chemotaxonomic marker within the Proteobacteria
-
Busse, H.-J. & Auling, G. (1988). Polyamine pattern as a chemotaxonomic marker within the Proteobacteria. Syst Appl Microbiol 11, 1-8.
-
(1988)
Syst Appl Microbiol
, vol.11
, pp. 1-8
-
-
Busse, H.-J.1
Auling, G.2
-
3
-
-
0030807960
-
Discrimination of members of the family Pasteurellaceae based on polyamine patterns
-
Busse, H.-J., Bunke, S., Hensel, A. & Lubitz, W. (1997). Discrimination of members of the family Pasteurellaceae based on polyamine patterns. Int J Syst Bacteriol 47, 698-708.
-
(1997)
Int J Syst Bacteriol
, vol.47
, pp. 698-708
-
-
Busse, H.-J.1
Bunke, S.2
Hensel, A.3
Lubitz, W.4
-
4
-
-
0037251969
-
-
Cole, J. R., Chai, B., Marsh, T. L., Farris, R. J., Wang, Q., Kulam, S. A., Chandra, S., McGarrell, D. M., Schmidt, T. M. & other authors (2003). The Ribosomal Database Project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy. Nucleic Acids Res 31, 442-443.
-
Cole, J. R., Chai, B., Marsh, T. L., Farris, R. J., Wang, Q., Kulam, S. A., Chandra, S., McGarrell, D. M., Schmidt, T. M. & other authors (2003). The Ribosomal Database Project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy. Nucleic Acids Res 31, 442-443.
-
-
-
-
5
-
-
10044231713
-
-
Ding, L. & Yokota, A. (2004). Proposals of Curvibacter gracilis gen. nov., sp. nov. and Herbaspirillum putei sp. nov. for bacterial strains isolated from well water and reclassification of [Pseudomonas] huttiensis, [Pseudomonas] lanceolata, [Aquaspirillum] delicatum and [Aquaspirillum] autotrophicum as Herbaspirillum huttiense comb. nov., Curvibacter lanceolatus comb. nov., Curvibacter delicatus comb. nov. and Herbaspirillum autotrophicum comb. nov. Int J Syst Evol Microbiol 54, 2223-2230.
-
Ding, L. & Yokota, A. (2004). Proposals of Curvibacter gracilis gen. nov., sp. nov. and Herbaspirillum putei sp. nov. for bacterial strains isolated from well water and reclassification of [Pseudomonas] huttiensis, [Pseudomonas] lanceolata, [Aquaspirillum] delicatum and [Aquaspirillum] autotrophicum as Herbaspirillum huttiense comb. nov., Curvibacter lanceolatus comb. nov., Curvibacter delicatus comb. nov. and Herbaspirillum autotrophicum comb. nov. Int J Syst Evol Microbiol 54, 2223-2230.
-
-
-
-
6
-
-
55849127724
-
-
Felsenstein, J, 2002, PHYLIP phylogeny inference package, version 3.6a. Distributed by the author. Department of Genetics, University of Washington, Seattle, USA
-
Felsenstein, J. (2002). PHYLIP (phylogeny inference package), version 3.6a. Distributed by the author. Department of Genetics, University of Washington, Seattle, USA.
-
-
-
-
7
-
-
0037640886
-
Rhodoferax ferrireducens sp. nov., a psychrotolerant, facultatively anaerobic bacterium that oxidizes acetate with the reduction of Fe(III)
-
Finneran, K. T., Johnsen, C. V. & Lòvley, D. R. (2003). Rhodoferax ferrireducens sp. nov., a psychrotolerant, facultatively anaerobic bacterium that oxidizes acetate with the reduction of Fe(III). Int J Syst Evol Microbiol 53, 669-673.
-
(2003)
Int J Syst Evol Microbiol
, vol.53
, pp. 669-673
-
-
Finneran, K.T.1
Johnsen, C.V.2
Lòvley, D.R.3
-
8
-
-
77956986901
-
Preparation of buffers for use in enzyme studies
-
Gomori, G. (1955). Preparation of buffers for use in enzyme studies. Methods Enzymol 1, 138-146.
-
(1955)
Methods Enzymol
, vol.1
, pp. 138-146
-
-
Gomori, G.1
-
9
-
-
0037360511
-
Ramlibacter tataouinensis gen. nov., sp. nov., and Ramlibacter henchirensis sp. nov., cyst-producing bacteria isolated from subdesert soil in Tunisia
-
Heulin, T., Barakat M., Christen, R., Lesourd, M., Sutra, L., De Luca, G. & Achouak, W. (2003). Ramlibacter tataouinensis gen. nov., sp. nov., and Ramlibacter henchirensis sp. nov., cyst-producing bacteria isolated from subdesert soil in Tunisia. Int J Syst Evol Microbiol 53, 589-594.
-
(2003)
Int J Syst Evol Microbiol
, vol.53
, pp. 589-594
-
-
Heulin, T.1
Barakat, M.2
Christen, R.3
Lesourd, M.4
Sutra, L.5
De Luca, G.6
Achouak, W.7
-
10
-
-
0027957474
-
Phylogenetic affiliations of Rhodoferax fermentans and related species of phototrophic bacteria as determined by automated 16S rDNA sequencing
-
Hiraishi, A. (1994). Phylogenetic affiliations of Rhodoferax fermentans and related species of phototrophic bacteria as determined by automated 16S rDNA sequencing. Curr Microbiol 28, 25-29.
-
(1994)
Curr Microbiol
, vol.28
, pp. 25-29
-
-
Hiraishi, A.1
-
11
-
-
0025975919
-
Rhodoferax fermentans gen. nov., sp. nov., a phototrophic purple nonsulfur bacterium previously referred to as the "Rhodocyclus gelatinosus-like" group
-
Hiraishi, A., Hoshino, Y. & Satoh, T. (1991). Rhodoferax fermentans gen. nov., sp. nov., a phototrophic purple nonsulfur bacterium previously referred to as the "Rhodocyclus gelatinosus-like" group. Arch Microbiol 155, 330-336.
-
(1991)
Arch Microbiol
, vol.155
, pp. 330-336
-
-
Hiraishi, A.1
Hoshino, Y.2
Satoh, T.3
-
12
-
-
0029684178
-
Polaromonas vacuolara gen. nov., sp. nov., a psychrophilic, marine, gas vacuolate bacterium from Antarctica
-
Irgens, R. L., Gosink, J. J. & Staley, J. T. (1996). Polaromonas vacuolara gen. nov., sp. nov., a psychrophilic, marine, gas vacuolate bacterium from Antarctica. Int J Syst Bacteriol 46, 822-826.
-
(1996)
Int J Syst Bacteriol
, vol.46
, pp. 822-826
-
-
Irgens, R.L.1
Gosink, J.J.2
Staley, J.T.3
-
13
-
-
0037402366
-
Microbial communities in activated sludge performing enhanced biological phosphorus removal in a sequencing batch reactor
-
Jeon, C. O., Lee, O. S. & Park, J. M. (2003). Microbial communities in activated sludge performing enhanced biological phosphorus removal in a sequencing batch reactor. Water Res 37, 2195-2205.
-
(2003)
Water Res
, vol.37
, pp. 2195-2205
-
-
Jeon, C.O.1
Lee, O.S.2
Park, J.M.3
-
14
-
-
0842345383
-
Polaromonas naphthalenivorans sp. nov., a naphthlene-degrading bacterium from naphthalene-contaminated sediment
-
Jeon, C. O., Park, W., Ghiorse, W. C. & Madsen E. L. (2004). Polaromonas naphthalenivorans sp. nov., a naphthlene-degrading bacterium from naphthalene-contaminated sediment. Int J Syst Evol Microbiol 54, 93-97.
-
(2004)
Int J Syst Evol Microbiol
, vol.54
, pp. 93-97
-
-
Jeon, C.O.1
Park, W.2
Ghiorse, W.C.3
Madsen, E.L.4
-
15
-
-
26244454786
-
-
Jeon, C. O., Lim, J. M., Lee, J. M., Xu, L H., Jiang, C. L. & Kim, C. J. (2005). Reclassification of Bacillus haloalkaliphilus Fritze 1996 as Alkalibacillus haloalkaliphilus gen. nov., comb. nov. and the description of Alkalibacillus salilacus sp. nov., a novel halophilic bacterium isolated from a salt lake in China. Int J Syst Evol Microbiol 55, 1891-1896.
-
Jeon, C. O., Lim, J. M., Lee, J. M., Xu, L H., Jiang, C. L. & Kim, C. J. (2005). Reclassification of Bacillus haloalkaliphilus Fritze 1996 as Alkalibacillus haloalkaliphilus gen. nov., comb. nov. and the description of Alkalibacillus salilacus sp. nov., a novel halophilic bacterium isolated from a salt lake in China. Int J Syst Evol Microbiol 55, 1891-1896.
-
-
-
-
16
-
-
51249170746
-
Microbiological characterization of a fuel-oil contaminated site including numerical identification of heterotrophic water and soil bacteria
-
Kämpfer, P., Steiof, M. & Dott, W. (1991). Microbiological characterization of a fuel-oil contaminated site including numerical identification of heterotrophic water and soil bacteria. Microb Ecol 21, 227-251.
-
(1991)
Microb Ecol
, vol.21
, pp. 227-251
-
-
Kämpfer, P.1
Steiof, M.2
Dott, W.3
-
17
-
-
33645215095
-
Polaromonas aquatica sp nov. isolated from tap water
-
Kämpfer, P., Busse, H.-J. & Falsen, E. (2006). Polaromonas aquatica sp nov. isolated from tap water. Int J Syst Evol Microbiol 56, 609-608.
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 609-608
-
-
Kämpfer, P.1
Busse, H.-J.2
Falsen, E.3
-
18
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
-
(1980)
J Mol Evol
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
19
-
-
77956800518
-
Lipid and cell-wall analysis in bacterial systematics
-
Komagata, K. & Suzuki, K. (1987). Lipid and cell-wall analysis in bacterial systematics. Methods Microbiol 19, 161-207.
-
(1987)
Methods Microbiol
, vol.19
, pp. 161-207
-
-
Komagata, K.1
Suzuki, K.2
-
20
-
-
0001857117
-
16S/23S rRNA sequencing
-
Edited by E. Stackebrandt & M. Goodfellow. Chichester: Wiley
-
Lane, D. J. (1991). 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bactetial Systematics, pp. 115-175. Edited by E. Stackebrandt & M. Goodfellow. Chichester: Wiley.
-
(1991)
Nucleic Acid Techniques in Bactetial Systematics
, pp. 115-175
-
-
Lane, D.J.1
-
21
-
-
77956816836
-
Classical and rapid identification methods for medically important bacteria
-
Lányí, B. (1987). Classical and rapid identification methods for medically important bacteria. Methods Microbiol 19, 1-67.
-
(1987)
Methods Microbiol
, vol.19
, pp. 1-67
-
-
Lányí, B.1
-
22
-
-
0000978501
-
Determination of carbohydrate metabolism of marine bacteria
-
Leifson, E (1963). Determination of carbohydrate metabolism of marine bacteria. J Bacteriol 85, 1183-1184.
-
(1963)
J Bacteriol
, vol.85
, pp. 1183-1184
-
-
Leifson, E.1
-
23
-
-
33745782349
-
Analysis of microbial communities using culture-dependent and -independent approaches in an anaerobic/aerobic SBR reactor
-
Lu, S., Park, M., Ro, H.-S., Lee, D. S., Park, W. & Jeon, C. O. (2006). Analysis of microbial communities using culture-dependent and -independent approaches in an anaerobic/aerobic SBR reactor. J Microbiol 44, 155-161.
-
(2006)
J Microbiol
, vol.44
, pp. 155-161
-
-
Lu, S.1
Park, M.2
Ro, H.-S.3
Lee, D.S.4
Park, W.5
Jeon, C.O.6
-
25
-
-
0347297226
-
Alicycliphilus denitrificans gen. nov., sp. nov., a cyclohexanol-degrading, nitrate-reducing β-proteobacterium
-
Mechichi, T., Stackebrandt, E & Fuchs, G. (2003). Alicycliphilus denitrificans gen. nov., sp. nov., a cyclohexanol-degrading, nitrate-reducing β-proteobacterium. Int J Syst Evol Microbiol 53, 147-152.
-
(2003)
Int J Syst Evol Microbiol
, vol.53
, pp. 147-152
-
-
Mechichi, T.1
Stackebrandt, E.2
Fuchs, G.3
-
26
-
-
33947308752
-
Polaromonas hydrogenivorans sp. nov., a psychrotolerant hydrogen-oxidizing bacterium from Alaskan soil
-
Sizova, M. & Panikov, N. (2007). Polaromonas hydrogenivorans sp. nov., a psychrotolerant hydrogen-oxidizing bacterium from Alaskan soil. Int J Syst Evol Microbiol 57, 616-619.
-
(2007)
Int J Syst Evol Microbiol
, vol.57
, pp. 616-619
-
-
Sizova, M.1
Panikov, N.2
-
27
-
-
0000612080
-
Phenotypic characterization
-
Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg, Washington, DC: American Society for Microbiology
-
Smibert, R. M. & Krieg, N. R. (1994). Phenotypic characterization. In Methods for General and Molecular Bacteriology, pp. 607-654. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg, Washington, DC: American Society for Microbiology.
-
(1994)
Methods for General and Molecular Bacteriology
, pp. 607-654
-
-
Smibert, R.M.1
Krieg, N.R.2
-
28
-
-
0842280549
-
-
2O-producing bacterium isolated from activated sludge, and transfer of Aquaspirillum gracile to Hylemonella gracilis gen. nov., comb. nov. Int J Syst Evol Microbiol 54, 99-106.
-
2O-producing bacterium isolated from activated sludge, and transfer of Aquaspirillum gracile to Hylemonella gracilis gen. nov., comb. nov. Int J Syst Evol Microbiol 54, 99-106.
-
-
-
-
29
-
-
0023720656
-
Proteobacteria classis no v., a name for the phylogenetic taxon that includes the "purple bacteria and their relatives
-
Stackebrandt, E., Murray, R., G. E. & Trüper, H. G. (1988). Proteobacteria classis no v., a name for the phylogenetic taxon that includes the "purple bacteria and their relatives". Int J Syst Bacteriol 38, 321-325.
-
(1988)
Int J Syst Bacteriol
, vol.38
, pp. 321-325
-
-
Stackebrandt, E.1
Murray, R.G.E.2
Trüper, H.G.3
-
30
-
-
0021715576
-
Determination of DNA base composition by reversed-phase high-performance liquid chromatography
-
Tamaoka, J. & Komagata, K. (1984). Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25, 125-128.
-
(1984)
FEMS Microbiol Lett
, vol.25
, pp. 125-128
-
-
Tamaoka, J.1
Komagata, K.2
-
31
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
32
-
-
34548293679
-
-
Wang, a, Garrity, G. M., Tiedje, J. M. & Cole, J. R. (2007). Naïve Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl Environ Microbiol 73, 5261-5267.
-
Wang, a, Garrity, G. M., Tiedje, J. M. & Cole, J. R. (2007). Naïve Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl Environ Microbiol 73, 5261-5267.
-
-
-
-
33
-
-
0032932359
-
-
Wen, A., Fegan, M., Hayward, C., Chakraborty, S. & Sly, L. I. (1999). Phylogenetic relationships among members of the Comamonadaceae, and description of Delftia acidovorans (den Dooren de Jong 1926 and Tamaoka et al. 1987) gen. nov., comb. nov. Int J Syst Bacteriol 49, 567-576.
-
Wen, A., Fegan, M., Hayward, C., Chakraborty, S. & Sly, L. I. (1999). Phylogenetic relationships among members of the Comamonadaceae, and description of Delftia acidovorans (den Dooren de Jong 1926 and Tamaoka et al. 1987) gen. nov., comb. nov. Int J Syst Bacteriol 49, 567-576.
-
-
-
-
34
-
-
0001112004
-
Transfer of Xanthomonas ampelina Panagopoulos 1969 to a new genus, Xylophilus gen. nov., as Xylophilus ampelinus (Panagopoulos 1969) comb, nov
-
Willems, A., Gillis, M., Kersters, K, Van Den Broecke, L. & De Ley, J. (1987). Transfer of Xanthomonas ampelina Panagopoulos 1969 to a new genus, Xylophilus gen. nov., as Xylophilus ampelinus (Panagopoulos 1969) comb, nov. Int J Syst Bacteriol 37, 422-430.
-
(1987)
Int J Syst Bacteriol
, vol.37
, pp. 422-430
-
-
Willems, A.1
Gillis, M.2
Kersters, K.3
Van Den Broecke, L.4
De Ley, J.5
-
35
-
-
0025832055
-
-
Willems, A., De Ley, J., Gillis, M. & Kersters, K. (1991). Comamonadaceae, a new family encompassing the acidovorans rRNA complex, including Variovorax paradoxus gen. nov., comb. nov., for Alcaligenes paradoxus (Davis) 1969. Int J Syst Bacteriol 41, 445-450.
-
Willems, A., De Ley, J., Gillis, M. & Kersters, K. (1991). Comamonadaceae, a new family encompassing the acidovorans rRNA complex, including Variovorax paradoxus gen. nov., comb. nov., for Alcaligenes paradoxus (Davis) 1969. Int J Syst Bacteriol 41, 445-450.
-
-
-
-
36
-
-
0026599535
-
-
Willems, A., Goor, M., Thielemans, S., Gillis, M., Kersters, K. & De Ley, J. (1992). Transfer of several phytopathogenic Pseudomonas species to Acidovorax avenae subsp. avenae subsp. nov., comb. nov., Acidovorax avenae subsp. citrulli, Acidovorax avenae subsp. cattleyae, and Acidovorax konjaci. Int J Syst Bacteriol 42, 107-119.
-
Willems, A., Goor, M., Thielemans, S., Gillis, M., Kersters, K. & De Ley, J. (1992). Transfer of several phytopathogenic Pseudomonas species to Acidovorax avenae subsp. avenae subsp. nov., comb. nov., Acidovorax avenae subsp. citrulli, Acidovorax avenae subsp. cattleyae, and Acidovorax konjaci. Int J Syst Bacteriol 42, 107-119.
-
-
-
-
37
-
-
10644224511
-
Formation of methane by bacterial extracts
-
Wolin, E. A., Wolin, M. J. & Wolfe, R. S. (1963). Formation of methane by bacterial extracts. J Biol Chem 238, 2882-2886.
-
(1963)
J Biol Chem
, vol.238
, pp. 2882-2886
-
-
Wolin, E.A.1
Wolin, M.J.2
Wolfe, R.S.3
-
38
-
-
33646178517
-
Variovorax dokdonensis sp. nov., isolated from soil
-
Yoon, J. H., Kang, S. J. & Oh, T. K. (2006). Variovorax dokdonensis sp. nov., isolated from soil. Int J Syst Evol Microbiol 56, 811-814.
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 811-814
-
-
Yoon, J.H.1
Kang, S.J.2
Oh, T.K.3
|