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Volumn 92, Issue 6, 2008, Pages 966-972

Phytophthora database: A forensic database supporting the identification and monitoring of phytophthora

(29)  Park, Jongsun a   Park, Bongsoo b   Veeraraghavan, Narayanan b   Jung, Kyongyong a   Lee, Yong Hwan a   Blair, Jaime E b   Geiser, David M b   Isard, Scott b   Mansfield, Michele A b   Nikolaeva, Ekaterina b   Park, Sook Young b   Russo, Joseph c   Kim, Seong H d   Greene, Matthew e   Ivors, Kelly L e   Balci, Yilmaz f   Peiman, Masoomeh g   Erwin, Donald C g   Coffey, Michael D g   Rossman, Amy h   more..


Author keywords

Culture collection; Disease management; Invasive pathogens; Molecular diagnosis

Indexed keywords

ANALYSIS TOOLS; ECOLOGICAL SYSTEMS; PHYLOGENETIC TREES; PHYTOPHTHORA; SEQUENCE DATA; SYSTEMATIC (CO);

EID: 46849089018     PISSN: 01912917     EISSN: None     Source Type: Journal    
DOI: 10.1094/PDIS-92-6-0966     Document Type: Article
Times cited : (56)

References (36)
  • 1
    • 0003574283 scopus 로고    scopus 로고
    • Academic Press, San Diego, CA
    • Agrios, G. N. 2005. Plant Pathology. Academic Press, San Diego, CA.
    • (2005) Plant Pathology
    • Agrios, G.N.1
  • 3
    • 38849202384 scopus 로고    scopus 로고
    • A multi-locus phylogeny for Phytophthora utilizing markers derived from complete pathogen genomes
    • Blair, J. E., Coffey, M. D., Park, S., Geiser, D. M., and Kang, S. 2008. A multi-locus phylogeny for Phytophthora utilizing markers derived from complete pathogen genomes. Fungal Genet. Biol. 45:266-277.
    • (2008) Fungal Genet. Biol , vol.45 , pp. 266-277
    • Blair, J.E.1    Coffey, M.D.2    Park, S.3    Geiser, D.M.4    Kang, S.5
  • 4
    • 0033865021 scopus 로고    scopus 로고
    • Molecular characterization of natural hybrids of Phytophthora nicotianae and P. cactorum
    • Bonants, P. J. M., Hagenaar-de Weerdt, M., Man in 't Veld, W. A., and Baayen, R. P. 2000. Molecular characterization of natural hybrids of Phytophthora nicotianae and P. cactorum. Phytopathology 90:867-874.
    • (2000) Phytopathology , vol.90 , pp. 867-874
    • Bonants, P.J.M.1    Hagenaar-de Weerdt, M.2    Man in 't Veld, W.A.3    Baayen, R.P.4
  • 5
    • 24044514979 scopus 로고    scopus 로고
    • Phytophthora kernoviae sp. nov., an invasive pathogen causing bleeding stem lesions on forest trees and foliar necrosis of ornamentals in the UK
    • Brasier, C. M., Beales, P. A., Kirk, S. A., Denman, S., and Rose, J. 2005. Phytophthora kernoviae sp. nov., an invasive pathogen causing bleeding stem lesions on forest trees and foliar necrosis of ornamentals in the UK. Mycol. Res. 109:853-859.
    • (2005) Mycol. Res , vol.109 , pp. 853-859
    • Brasier, C.M.1    Beales, P.A.2    Kirk, S.A.3    Denman, S.4    Rose, J.5
  • 6
    • 0033545867 scopus 로고    scopus 로고
    • Origin of a new Phytophthora pathogen through interspecific hybridization
    • Brasier, C. M., Cooke, D. E. L., and Duncan, J. M. 1999. Origin of a new Phytophthora pathogen through interspecific hybridization. Proc. Natl. Acad. Sci. USA 96 (10):5878-5883.
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , Issue.10 , pp. 5878-5883
    • Brasier, C.M.1    Cooke, D.E.L.2    Duncan, J.M.3
  • 7
    • 0038075386 scopus 로고    scopus 로고
    • Multiple new phenotypic taxa from trees and riparian ecosystems in Phytophthora gonapodyides-P. megasperma ITS clade 6, which tend to be high-temperature tolerant and either inbreeding or sterile
    • Brasier, C. M., Cooke, D. E. L., Duncan, J. M., and Hansen, M. E. 2003. Multiple new phenotypic taxa from trees and riparian ecosystems in Phytophthora gonapodyides-P. megasperma ITS clade 6, which tend to be high-temperature tolerant and either inbreeding or sterile. Mycol. Res. 107:277-290.
    • (2003) Mycol. Res , vol.107 , pp. 277-290
    • Brasier, C.M.1    Cooke, D.E.L.2    Duncan, J.M.3    Hansen, M.E.4
  • 8
    • 6344220063 scopus 로고    scopus 로고
    • Phytophthora alni sp. nov. and its variants: Designation of emerging heteroploid hybrid pathogens spreading on Alnus trees
    • Brasier, C. M., Kirk, S. A., Delcan, J., Cooke, D. E. L., Jung, T., and Man in 't Veld, W. A. 2004. Phytophthora alni sp. nov. and its variants: designation of emerging heteroploid hybrid pathogens spreading on Alnus trees. Mycol. Res. 108:1172-1184.
    • (2004) Mycol. Res , vol.108 , pp. 1172-1184
    • Brasier, C.M.1    Kirk, S.A.2    Delcan, J.3    Cooke, D.E.L.4    Jung, T.5    Man in 't Veld, W.A.6
  • 9
    • 13944272761 scopus 로고    scopus 로고
    • Genetic diversity of European populations of the oak fine-root pathogen Phytophthora quercina
    • Cooke, D. E. L., Jung, T., Williams, N. A., Drenth, A., Schubert, R., Oßward, W., and Duncan, J. M. 2005. Genetic diversity of European populations of the oak fine-root pathogen Phytophthora quercina. For. Pathol. 35:57-70.
    • (2005) For. Pathol , vol.35 , pp. 57-70
    • Cooke, D.E.L.1    Jung, T.2    Williams, N.A.3    Drenth, A.4    Schubert, R.5    Oßward, W.6    Duncan, J.M.7
  • 12
    • 0030693871 scopus 로고    scopus 로고
    • Re-emergence of potato and tomato late blight in the United States
    • Fry, W. E., and Goodwin, S. B. 1997. Re-emergence of potato and tomato late blight in the United States. Plant Dis. 81:1349-1357.
    • (1997) Plant Dis , vol.81 , pp. 1349-1357
    • Fry, W.E.1    Goodwin, S.B.2
  • 13
    • 33748070889 scopus 로고    scopus 로고
    • Practical fungal molecular taxonomy
    • J. Tkacz and L. Lange, eds. Kluwer Academic Publishers, Dordrecht, The Netherlands
    • Geiser, D. M. 2004. Practical fungal molecular taxonomy. Pages 1-12 in: Advances in Fungal Biotechnology for Industry. J. Tkacz and L. Lange, eds. Kluwer Academic Publishers, Dordrecht, The Netherlands.
    • (2004) Advances in Fungal Biotechnology for Industry , pp. 1-12
    • Geiser, D.M.1
  • 14
    • 0000869232 scopus 로고
    • Intercontinental epidemiology of Dutch elm disease
    • Gibbs, J. N. 1978. Intercontinental epidemiology of Dutch elm disease. Annu. Rev. Phytopathol. 16:287-307.
    • (1978) Annu. Rev. Phytopathol , vol.16 , pp. 287-307
    • Gibbs, J.N.1
  • 15
    • 33751583804 scopus 로고    scopus 로고
    • Phytophthora genomics: The plant destroyers' genome decoded
    • Govers, F., and Gijzen, M. 2006. Phytophthora genomics: The plant destroyers' genome decoded. Mol. Plant-Microbe Interact. 19:1295-1301.
    • (2006) Mol. Plant-Microbe Interact , vol.19 , pp. 1295-1301
    • Govers, F.1    Gijzen, M.2
  • 16
    • 0346902037 scopus 로고    scopus 로고
    • Phytophthora nemorosa, a new species causing cankers and leaf blight of forest trees in California and Oregon
    • Hansen, E. M., Reeser, P., Davidson, J. M., Garbelotto, M., Ivors, K., Douhan, L., and Rizzo, D. M. 2003. Phytophthora nemorosa, a new species causing cankers and leaf blight of forest trees in California and Oregon. Mycotaxon 88:129-138.
    • (2003) Mycotaxon , vol.88 , pp. 129-138
    • Hansen, E.M.1    Reeser, P.2    Davidson, J.M.3    Garbelotto, M.4    Ivors, K.5    Douhan, L.6    Rizzo, D.M.7
  • 17
    • 0038515720 scopus 로고    scopus 로고
    • Agricultural Bioterrorism Protection Act of 2002; listing of biological agents and toxins and requirements and procedures for notification of possession
    • Hawks, B. 2002. Agricultural Bioterrorism Protection Act of 2002; listing of biological agents and toxins and requirements and procedures for notification of possession. Fed. Regist. 67:52383-52389.
    • (2002) Fed. Regist , vol.67 , pp. 52383-52389
    • Hawks, B.1
  • 18
    • 0033496440 scopus 로고    scopus 로고
    • Phytophthora quercina sp. nov., causing root rot of European oaks
    • Jung, T., Cooke, D. E. L., Blaschke, H., Duncan, J. M., and Oßwald, W. F. 1999. Phytophthora quercina sp. nov., causing root rot of European oaks. Mycol. Res. 103:785-798.
    • (1999) Mycol. Res , vol.103 , pp. 785-798
    • Jung, T.1    Cooke, D.E.L.2    Blaschke, H.3    Duncan, J.M.4    Oßwald, W.F.5
  • 19
    • 0036062804 scopus 로고    scopus 로고
    • Three new species of Phytophthora from European oak forests
    • Jung, T., Hansen, E. M., Winton, L., Oßwald, W. F., and Delatour, C. 2002. Three new species of Phytophthora from European oak forests. Mycol. Res. 106:397-411.
    • (2002) Mycol. Res , vol.106 , pp. 397-411
    • Jung, T.1    Hansen, E.M.2    Winton, L.3    Oßwald, W.F.4    Delatour, C.5
  • 20
    • 0041423446 scopus 로고    scopus 로고
    • Phytophthora pseudosyringae sp. nov., a new species causing root and collar rot of deciduous tree species in Europe
    • Jung, T., Nechwatal, J., Cooke, D. E., Hartman, G., Blaschke, M., Oswald, W. F., Duncan, J. M., and Delatour, C. 2003. Phytophthora pseudosyringae sp. nov., a new species causing root and collar rot of deciduous tree species in Europe. Mycol. Res. 107:772-789.
    • (2003) Mycol. Res , vol.107 , pp. 772-789
    • Jung, T.1    Nechwatal, J.2    Cooke, D.E.3    Hartman, G.4    Blaschke, M.5    Oswald, W.F.6    Duncan, J.M.7    Delatour, C.8
  • 22
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar, S., Tamura, K., and Nei, M. 2004. MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief. Bioinf. 5:150-163.
    • (2004) Brief. Bioinf , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 24
    • 0242574521 scopus 로고    scopus 로고
    • The threat of plant pathogens as weapons against U.S. crops
    • Madden, L. V., and Wheelis, M. 2003. The threat of plant pathogens as weapons against U.S. crops. Annu. Rev. Phytopathol. 41:155-176.
    • (2003) Annu. Rev. Phytopathol , vol.41 , pp. 155-176
    • Madden, L.V.1    Wheelis, M.2
  • 25
    • 4344695318 scopus 로고    scopus 로고
    • Identification of Phytophthora isolates to species level using RFLP analysis of a PCR amplified region of mitochondrial DNA
    • Martin, F. N., and Tooley, P. W. 2004. Identification of Phytophthora isolates to species level using RFLP analysis of a PCR amplified region of mitochondrial DNA. Phytopathology 94:983-991.
    • (2004) Phytopathology , vol.94 , pp. 983-991
    • Martin, F.N.1    Tooley, P.W.2
  • 26
    • 2542482828 scopus 로고    scopus 로고
    • Molecular detection of Phytophthora ramorum, the causal agent of sudden oak death in California, and two additional species commonly recovered from diseased plant material
    • Martin, F. N., Tooley, P. W., and Blomquist, C. 2004. Molecular detection of Phytophthora ramorum, the causal agent of sudden oak death in California, and two additional species commonly recovered from diseased plant material. Phytopathology 94:621-631.
    • (2004) Phytopathology , vol.94 , pp. 621-631
    • Martin, F.N.1    Tooley, P.W.2    Blomquist, C.3
  • 28
    • 26244464220 scopus 로고    scopus 로고
    • Polashock, J. J., Vaiciunas, J., and Oudemans, P. V. 2005. Identification of a new Phytophthora species causing root and runner rot of cranberry in New Jersey. Phytopathology 95:1237-1243.
    • Polashock, J. J., Vaiciunas, J., and Oudemans, P. V. 2005. Identification of a new Phytophthora species causing root and runner rot of cranberry in New Jersey. Phytopathology 95:1237-1243.
  • 29
    • 0036185434 scopus 로고    scopus 로고
    • Phytophthora ramorum as the cause of extensive mortality of Quercus spp. and Lithocarpus densiflorus in California
    • Rizzo, D. M., Garbelotto, M., Davidson, J. M., Slaughter, G. W., and Koike, S. T. 2002. Phytophthora ramorum as the cause of extensive mortality of Quercus spp. and Lithocarpus densiflorus in California. Plant Dis. 86:205-214.
    • (2002) Plant Dis , vol.86 , pp. 205-214
    • Rizzo, D.M.1    Garbelotto, M.2    Davidson, J.M.3    Slaughter, G.W.4    Koike, S.T.5
  • 30
    • 24944439050 scopus 로고    scopus 로고
    • Phytophthora ramorum: Integrative research and management of an emerging pathogen in California and Oregon forests
    • Rizzo, D. M., Garbelotto, M., and Hansen, E. M. 2005. Phytophthora ramorum: Integrative research and management of an emerging pathogen in California and Oregon forests. Annu. Rev. Phytopathol. 43:309-335.
    • (2005) Annu. Rev. Phytopathol , vol.43 , pp. 309-335
    • Rizzo, D.M.1    Garbelotto, M.2    Hansen, E.M.3
  • 31
    • 46849098469 scopus 로고    scopus 로고
    • Swofford, D. L. 2002. PAUP*: Phylogenetic Analysis Using Parsimony (and Other Methods), 4.0 beta. Sinauer and Associates, Sunderland, MA.
    • Swofford, D. L. 2002. PAUP*: Phylogenetic Analysis Using Parsimony (and Other Methods), 4.0 beta. Sinauer and Associates, Sunderland, MA.
  • 33
    • 0027968068 scopus 로고
    • The ClustalW: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position, specific gap penalties, and weight matrix choice
    • Thompson, J. D., Higgins, D. G., and Gibson, T. J. 1994. The ClustalW: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position, specific gap penalties, and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 34
    • 4444228612 scopus 로고    scopus 로고
    • Molecular identification of Phytophthora nicotianae isolates causing leaf rot of betelvine (Piper betle L.)
    • Tripathi, A., Singh, R., Raj, S. K., Singh, A. P., and Johri, J. K. 2003. Molecular identification of Phytophthora nicotianae isolates causing leaf rot of betelvine (Piper betle L.). Curr. Sci. 84:22-24.
    • (2003) Curr. Sci , vol.84 , pp. 22-24
    • Tripathi, A.1    Singh, R.2    Raj, S.K.3    Singh, A.P.4    Johri, J.K.5
  • 35
    • 33748329373 scopus 로고    scopus 로고
    • Tyler, B. M, Tripathy, S, Zhang, X, Dehal, P, Jiang, R. H. Y, Aerts, A, Arredondo, F. D, Baxter, L, Bensasson, D, Beynon, J. L, Chapman, J, Damasceno, C. M. B, Dorrance, A. E, Dou, D, Dickerman, A. W, Dubchak, I. L, Garbelotto, M, Gijzen, M, Gordon, S. G, Govers, F, Grunwald, N. J, Huang, W, Ivors, K. L, Jones, R. W, Kamoun, S, Krampis, K, Lamour, K. H, Lee, M.-K, McDonald, W. H, Medina, M, Meijer, H. J. G, Nordberg, E. K, Maclean, D. J, Ospina-Giraldo, M. D, Morris, P. F, Phuntumart, V, Putnam, N. H, Rash, S, Rose, J. K. C, Sakihama, Y, Salamov, A. A, Savidor, A, Scheuring, C. F, Smith, B. M, Sobral, B. W. S, Terry, A, Torto-Alalibo, T. A, Win, J, Xu, Z, Zhang, H, Grigoriev, I. V, Rokhsar, D. S, and Boore, J. L. 2006. Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis. Science 313:1261-1266
    • Tyler, B. M., Tripathy, S., Zhang, X., Dehal, P., Jiang, R. H. Y., Aerts, A., Arredondo, F. D., Baxter, L., Bensasson, D., Beynon, J. L., Chapman, J., Damasceno, C. M. B., Dorrance, A. E., Dou, D., Dickerman, A. W., Dubchak, I. L., Garbelotto, M., Gijzen, M., Gordon, S. G., Govers, F., Grunwald, N. J., Huang, W., Ivors, K. L., Jones, R. W., Kamoun, S., Krampis, K., Lamour, K. H., Lee, M.-K., McDonald, W. H., Medina, M., Meijer, H. J. G., Nordberg, E. K., Maclean, D. J., Ospina-Giraldo, M. D., Morris, P. F., Phuntumart, V., Putnam, N. H., Rash, S., Rose, J. K. C., Sakihama, Y., Salamov, A. A., Savidor, A., Scheuring, C. F., Smith, B. M., Sobral, B. W. S., Terry, A., Torto-Alalibo, T. A., Win, J., Xu, Z., Zhang, H., Grigoriev, I. V., Rokhsar, D. S., and Boore, J. L. 2006. Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis. Science 313:1261-1266.


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