Past and present patterns of connectivity among populations of four cryptic species of freshwater mussels Velesunio spp. (Hyriidae) in central Australia

Molecular Ecology

Volumn 13, Issue 10, 2004, Pages 3197-3212

  Hughes, Jane ^a,b   Baker, Andrew M ^a,c   Bartlett, Christopher ^a   Bunn, Stuart ^a,d   Goudkamp, Katrina ^a   Somerville, Jemma ^a  

^a GRIFFITH UNIVERSITY   (Australia)

^b Molec Ecol Laboratory at Griffith   (Australia)

^c QUEENSLAND UNIVERSITY OF TECHNOLOGY   (Australia)

^d Ctr Riverine Landscapes at Griffith

Author keywords

Allozymes; Freshwater mussels; Gene flow; Mitochondrial DNA

Indexed keywords

FRESH WATER; ISOENZYME; MITOCHONDRIAL DNA;

ANALYSIS OF VARIANCE; ANIMAL; ARTICLE; AUSTRALIA; BAYES THEOREM; BIOLOGICAL MODEL; BIVALVE; COMPARATIVE STUDY; DEMOGRAPHY; DNA SEQUENCE; GENETIC VARIABILITY; GENETICS; GEOGRAPHY; HAPLOTYPE; MOLECULAR EVOLUTION; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; POPULATION DYNAMICS; POPULATION GENETICS; SPECIES DIFFERENCE;

ANALYSIS OF VARIANCE; ANIMALS; BASE SEQUENCE; BAYES THEOREM; BIVALVIA; DEMOGRAPHY; DNA, MITOCHONDRIAL; EVOLUTION, MOLECULAR; FRESH WATER; GENETICS, POPULATION; GEOGRAPHY; HAPLOTYPES; ISOENZYMES; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; NEW SOUTH WALES; PHYLOGENY; POPULATION DYNAMICS; QUEENSLAND; SEQUENCE ANALYSIS, DNA; SPECIES SPECIFICITY; VARIATION (GENETICS);

HYRIIDAE; INVERTEBRATA; VELESUNIO;

EID: 4644341803     PISSN: 09621083     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1365-294X.2004.02305.x     Document Type: Article

References (43)

1. Adams LE (1905) A plover with Anodonta cygnea attached to its foot. Journal of Conchology, 11, 175.
2. Alley NF (1998) Caenizoic stratigraphy, palaeoenvironments and geological evolution of the Lake Eyre Basin. Palaeogeography, Plaeoclimatology and Palaeoecology, 111, 239-263.
3. Avise JC (2000) Phylogeography: the History and Formation of Species. Harvard University Press, Cambridge, MA.
4. Baker AM, Bartlett C, Bunn SE, Goudkamp K, Sheldon F, Hughes JM (2003) Cryptic species and morphological plasticity in long-lived bivalves (Unionoida: Hyriidae) from inland Australia. Molecular Ecology, 12, 2707-2717.
5. Bilton DT, Freeland JR, Okamura B (2001) Dispersal in freshwater invertebrates. Annual Review of Ecology and Systematics, 32, 159-181.
6. Birky CW Jr, Maruyama T, Fuerst P (1983) An approach to population and evolutionary genetic theory for genes in mitochondria and chloroplasts, and some results. Genetics, 103, 513-527.
7. Brower AVZ (1994) Rapid morphological radiation and convergence among races of the butterfly Heliconius erato inferred from patterns of mitochondrial DNA evolution. Proceedings of the National Academy of Sciences USA, 91, 6491-6495.
8. Clement M, Posada D, Crandall KA (2000) TCS: a computer program to estimate gene genealogies. Molecular Ecology, 9, 1657-1659.
9. Cook B, Hughes JM, Bunn SE (2002) Population structure of the freshwater prawn Macrobrachium australiense in drainages of western Queensland, Australia. Freshwater Biology, 12, 2098-2112.
10. Crandall KA (1996) Multiple interspecies transmissions of human and simian T-cell leukemia/lymphoma virus Type I sequences. Molecular Biology and Evolution, 13, 115-131.
11. Doyle JJ, Doyle JL (1987) A rapid DNA isolation procedure for small quantities of leaf tissue. Phytochemistry Bulletin, 19, 11-15.
12. Excoffier L, Smouse PE, Quattro J (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics, 131, 479-491.
13. Felsenstein J (1988) Phylogenies from molecular sequences: inference and reliability. Annual Review of Genetics, 22, 521-565.
14. Folmer O, Black M, Hoeh W, Lutz R, Vrijenhoek R (1994) DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Molecular Marine Biology and Biotechnology, 3, 294-299.
15. Grandjean F, Souty-Grosset C, Raimond R, Holdich DM (1997) Geographical variation of mitochondrial DNA between populations of the white-clawed crayfish Austropotamobius pallipes. Freshwater Biology, 37, 493-501.
16. Guo S, Thompson E (1992) Performing the exact test of Hardy-Weinberg proportion for multiple alleles. Biometrics, 48, 361-372.
17. Hall TA (1999) BIOEDIT: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series, 41, 95-98.
18. Hughes JM, Hillyer M (2003) Patterns of connectivity among populations of the freshwater crayfish Cherax destructor (Decapoda: Parastacidae) in western Queensland, Australia. Marine and Freshwater Research, 54, 587-596.
19. Hurwood DA, Hughes JM (1998) Phylogeography of the freshwater fish, Mogurnda adspersa, in streams of north-eastern Queensland, Australia: evidence for altered drainage patterns. Molecular Ecology, 7, 1507-1517.
20. Hurwood DA, Hughes JM (2001) Nested clade analysis of the freshwater shrimp, Caridina zebra (Decapoda: Atyidae), from north-eastern Australia. Molecular Ecology, 10, 113-126.
21. King TL, Eackles MS, Gjetvaj B, Hoeh WR (1999) Intraspecific phylogeography of Lasmigona subviridis (Bivalvia' Unionida): conservation implications of range discontinuity. Molecular Ecology, 8, 565-578.
22. Kotwicki V (1986) Floods of Lake Eyre. Adelaide Engineering and Water Supply Department, Adelaide.
23. Marko PB (2002) Fossil calibration of molecular clocks and the divergence times of geminate species pairs separated by the Isthmus of Panama. Molecular Biology and Evolution, 19, 2005-2021.
24. McGlashan DJ, Hughes JM (2000) Reconciling patterns of genetic variation with stream structure, earth history and biology of the Australian freshwater fish Craterocephalus stercusmuscarum (Atherinidae). Molecular Ecology, 9, 1737-1751.
25. Meffe GK, Vrijenhoek RC (1988) Conservation genetics in the management of desert fishes. Conservation Biology, 2, 157-167.
26. Nielsen R, Wakeley J (2001) Distinguishing migration from isolation: a Markov chain Monte Carlo approach. Genetics, 158, 885-896.
27. Pennack RW (1978) Fresh-water Invertebrates of the United States. Wiley and Sons, New York.
28. Pickup G (1991) Event frequency and landscape stability on the floodplain systems of arid central Australia. Quarterly Science Reviews, 10, 463-473.
29. Posada D, Crandall KA, Templeton AR (2000) GEODIS: a program for the cladistic nested analysis of the geographical distribution of genetic haplotypes. Molecular Ecology, 9, 487-488.
30. Puckridge JT, Sheldon F, Walker KF, Boulton AJ (1998) Flow variability and the ecology of large rivers. Marine and Freshwater Research, 49, 55-72.
31. Richardson B, Baverstock PR, Adams M (1986) Allozyme Electrophoresis: a Handbook for Animal Systematics and Population Studies. Academic Press, Sydney.
32. Schmidt HA, Strimmer K, Vingron M, von Haeseler A (2002) TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics, 18, 502-504.
33. Schneider S, Roessli D, Excoffier L (2000) ARLEQUIN, Version 2.000: a Software for Population Genetics Data Analysis. Genetics and Biometry Laboratory. University of Geneva, Switzerland.
34. Tajima F (1989) Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics, 123, 585-595.
35. Templeton AR (2004) Statistical phylogeography: methods of evaluating and minimizing inference errors. Molecular Ecology, 13, 789-809.
36. Templeton AR, Boerwinkle E, Sing CF (1987) A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping. I. Basic theory and an analysis of alcohol dehydrogenase activity in Drosophila. Genetics, 117, 343-351.
37. Templeton AR, Crandall KA, Sing CF (1992) A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation. Genetics, 132, 619-633.
38. Templeton AR, Routman E, Phillips C (1995) Separating population structure from population history: a cladistic analysis of the geographic distribution of mitochondrial DNA haplotypes in the Tiger salamander, Ambystoma tigrinum. Genetics, 140, 767-782.
39. Templeton AR, Sing CF (1993) A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping. IV. Nested analyses with cladogram uncertainty and recombination. Genetics, 131, 659-669.
40. Walker KF, Byrne M, Hickey CW, Roper DS (2001) Freshwater mussels (Hyriidae) of Australasia. In: Ecology and Evolution of Freshwater Mussels Unionioda (eds Bauer G, Wachtler K), pp. 5-31. Springer Verlag, Berlin.
41. Waters JM, Craw D, Youngson JH, Wallis GP (2001) Genes meet geology: fish phylogeographic patterns reflects ancient, rather than modern, drainage connections. Evolution, 55, 1844-1851.
42. Watters GT (1992) Unionids, fishes and the species area curve. Journal of Biogeography, 19, 481-490.
43. Williams JD, Warren ML, Cummings KS, Harris JL, Neves RJ (1993) Conservation status of freshwater mussels of the United States and Canada. Fisheries, 18, 6-22.