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Volumn 239, Issue 1, 2004, Pages 147-155

Genetic characterization of the dibenzofuran-degrading Actinobacteria carrying the dbfA1A2 gene homologues isolated from activated sludge

Author keywords

Actinobacteria; Dibenzofuran 4,4a dioxygenase; Dibenzofuran degradation; Rhodococcus sp.; Terrabacter sp.

Indexed keywords

DIBENZOFURAN; OXYGENASE; RIBOSOME DNA; RIBOSOME RNA;

EID: 4644293675     PISSN: 03781097     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.femsle.2004.08.032     Document Type: Article
Times cited : (12)

References (30)
  • 1
    • 0020010617 scopus 로고
    • 2,3,7,8-Tetrachlorodibenzo-p-dioxin and related halogenated aromatic hydrocarbons: Examination of the mechanism of toxicity
    • A. Poland, and J.C. Knutson 2,3,7,8-Tetrachlorodibenzo-p-dioxin and related halogenated aromatic hydrocarbons: examination of the mechanism of toxicity Ann. Rev. Pharmacol. Toxicol. 22 1982 517 554
    • (1982) Ann. Rev. Pharmacol. Toxicol. , vol.22 , pp. 517-554
    • Poland, A.1    Knutson, J.C.2
  • 2
    • 0024997614 scopus 로고
    • Polychlorinated biphenyls (PCBs), dibenzofurans (PCDFs), and related compounds: Environmental and mechanistic considerations which support the development of toxic equivalency factors
    • S. Safe Polychlorinated biphenyls (PCBs), dibenzofurans (PCDFs), and related compounds: environmental and mechanistic considerations which support the development of toxic equivalency factors CRC Crit. Rev. Toxicol. 21 1990 51 88
    • (1990) CRC Crit. Rev. Toxicol. , vol.21 , pp. 51-88
    • Safe, S.1
  • 3
    • 0024511739 scopus 로고
    • Enrichment of dibenzofuran utilizing bacteria with high co-metabolic potential towards dibenzodioxin and other anellated aromatics
    • V. Strubel, H.G. Rast, W. Fietz, H.J. Knackmuss, and K.H. Engesser Enrichment of dibenzofuran utilizing bacteria with high co-metabolic potential towards dibenzodioxin and other anellated aromatics FEMS Microbiol. Lett. 58 1989 233 238
    • (1989) FEMS Microbiol. Lett. , vol.58 , pp. 233-238
    • Strubel, V.1    Rast, H.G.2    Fietz, W.3    Knackmuss, H.J.4    Engesser, K.H.5
  • 4
    • 14444278496 scopus 로고
    • Dioxygenolytic cleavage of aryl ether bonds: 1,10-dihydro-1,10- dihydroxyfluoren-9-one, a novel arene dihydrodiol as evidence for angular dioxygenation of dibenzofuran
    • K.H. Engesser, V. Strubel, K. Christoglou, P. Fischer, and H.G. Rast Dioxygenolytic cleavage of aryl ether bonds: 1,10-dihydro-1,10-dihydroxyfluoren- 9-one, a novel arene dihydrodiol as evidence for angular dioxygenation of dibenzofuran FEMS Microbiol. Lett. 65 1989 205 210
    • (1989) FEMS Microbiol. Lett. , vol.65 , pp. 205-210
    • Engesser, K.H.1    Strubel, V.2    Christoglou, K.3    Fischer, P.4    Rast, H.G.5
  • 6
    • 0027396638 scopus 로고
    • Microbial degradation of dibenzofuran, fluorene, and dibenzo-p-dioxin by Staphylococcus auriculans DBF63
    • L. Monna, T. Omori, and T. Kodama Microbial degradation of dibenzofuran, fluorene, and dibenzo-p-dioxin by Staphylococcus auriculans DBF63 Appl. Environ. Microbiol. 59 1993 285 289
    • (1993) Appl. Environ. Microbiol. , vol.59 , pp. 285-289
    • Monna, L.1    Omori, T.2    Kodama, T.3
  • 7
    • 0037022975 scopus 로고    scopus 로고
    • Isolation and characterization of dibenzofuran-degrading bacteria
    • K. Fukuda, S. Nagata, and H. Taniguchi Isolation and characterization of dibenzofuran-degrading bacteria FEMS Microbiol. Lett. 208 2002 179 185
    • (2002) FEMS Microbiol. Lett. , vol.208 , pp. 179-185
    • Fukuda, K.1    Nagata, S.2    Taniguchi, H.3
  • 8
    • 0036324296 scopus 로고    scopus 로고
    • Plasmid-borne gene code for an angular dioxygenase involved in dibenzofuran degradation by Terrabacter sp. strain YK3
    • T. Iida, Y. Mukouzaka, K. Nakamura, and T. Kudo Plasmid-borne gene code for an angular dioxygenase involved in dibenzofuran degradation by Terrabacter sp. strain YK3 Appl. Environ. Microbiol. 68 2002 3716 3723
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 3716-3723
    • Iida, T.1    Mukouzaka, Y.2    Nakamura, K.3    Kudo, T.4
  • 9
    • 0036654304 scopus 로고    scopus 로고
    • Isolation and characterization of dibenzofuran-degrading actinomycetes: Analysis of multiple extradiol dioxygenase genes in dibenzofuran-degrading Rhodococcus species
    • T. Iida, Y. Mukouzaka, K. Nakamura, I. Yamaguchi, and T. Kudo Isolation and characterization of dibenzofuran-degrading actinomycetes: analysis of multiple extradiol dioxygenase genes in dibenzofuran-degrading Rhodococcus species Biosci. Biotechnol. Biochem. 66 2002 1462 1472
    • (2002) Biosci. Biotechnol. Biochem. , vol.66 , pp. 1462-1472
    • Iida, T.1    Mukouzaka, Y.2    Nakamura, K.3    Yamaguchi, I.4    Kudo, T.5
  • 10
    • 1542544804 scopus 로고    scopus 로고
    • Degradation of chlorinated biphenyl, dibenzofuran, and dibenzo-p-dioxion by marine bacteria that degrade biphenyl, carbazole, or dibenzofuran
    • H. Fuse, O. Takimura, K. Murakami, H. Inoue, and Y. Yamaoka Degradation of chlorinated biphenyl, dibenzofuran, and dibenzo-p-dioxion by marine bacteria that degrade biphenyl, carbazole, or dibenzofuran Biosci. Biotechnol. Biochem. 67 2003 1121 1125
    • (2003) Biosci. Biotechnol. Biochem. , vol.67 , pp. 1121-1125
    • Fuse, H.1    Takimura, O.2    Murakami, K.3    Inoue, H.4    Yamaoka, Y.5
  • 11
  • 12
    • 0034854835 scopus 로고    scopus 로고
    • Metabolism of dibenzo-p-dioxin and chlorinated dibenzo-p-dioxin by a gram-positive bacterium, Rhodococcus opacus SAO101
    • N. Kimura, and Y. Urushigawa Metabolism of dibenzo-p-dioxin and chlorinated dibenzo-p-dioxin by a gram-positive bacterium, Rhodococcus opacus SAO101 J. Biosci. Bioeng. 92 2001 138 143
    • (2001) J. Biosci. Bioeng. , vol.92 , pp. 138-143
    • Kimura, N.1    Urushigawa, Y.2
  • 13
    • 0035432248 scopus 로고    scopus 로고
    • Degradation of chlorinated dibenzofurans and dibenzo-p-dioxins by two types of bacteria having angular dioxygenases with different features
    • H. Habe, J.S. Chung, J.H. Lee, K. Kasuga, T. Yoshida, H. Nojiri, and T. Omori Degradation of chlorinated dibenzofurans and dibenzo-p-dioxins by two types of bacteria having angular dioxygenases with different features Appl. Environ. Microbiol. 67 2001 3610 3617
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 3610-3617
    • Habe, H.1    Chung, J.S.2    Lee, J.H.3    Kasuga, K.4    Yoshida, T.5    Nojiri, H.6    Omori, T.7
  • 14
    • 0035986631 scopus 로고    scopus 로고
    • Degradation characteristics of a dibenzofuran-degrader Terrabacter sp. strain DBF63 toward chlorinated dioxins in soil
    • H. Habe, K. Ide, M. Yotsumoto, H. Tsuji, T. Yoshida, H. Nojiri, and T. Omori Degradation characteristics of a dibenzofuran-degrader Terrabacter sp. strain DBF63 toward chlorinated dioxins in soil Chemosphere 48 2002 201 207
    • (2002) Chemosphere , vol.48 , pp. 201-207
    • Habe, H.1    Ide, K.2    Yotsumoto, M.3    Tsuji, H.4    Yoshida, T.5    Nojiri, H.6    Omori, T.7
  • 15
    • 0031284266 scopus 로고    scopus 로고
    • Cloning and characterization of the genes involved in the degradation of dibenzofuran by Terrabacter sp. strain DBF63
    • K. Kasuga, H. Nojiri, H. Yamane, T. Kodama, and T. Omori Cloning and characterization of the genes involved in the degradation of dibenzofuran by Terrabacter sp. strain DBF63 J. Ferment. Bioeng. 84 1997 387 399
    • (1997) J. Ferment. Bioeng. , vol.84 , pp. 387-399
    • Kasuga, K.1    Nojiri, H.2    Yamane, H.3    Kodama, T.4    Omori, T.5
  • 16
    • 0034799210 scopus 로고    scopus 로고
    • Isolation and characterization of the genes encoding a novel oxygenase component of angular dioxygenase from the gram-positive dibenzofuran-degrader Terrabacter sp. strain DBF63
    • K. Kasuga, H. Habe, J.S. Chung, T. Yoshida, H. Nojiri, H. Yamane, and T. Omori Isolation and characterization of the genes encoding a novel oxygenase component of angular dioxygenase from the gram-positive dibenzofuran-degrader Terrabacter sp. strain DBF63 Biochem. Biophys. Res. Commun. 283 2001 195 204
    • (2001) Biochem. Biophys. Res. Commun. , vol.283 , pp. 195-204
    • Kasuga, K.1    Habe, H.2    Chung, J.S.3    Yoshida, T.4    Nojiri, H.5    Yamane, H.6    Omori, T.7
  • 18
    • 0031859323 scopus 로고    scopus 로고
    • Genetic analysis of dioxin dioxygenase of Sphingomonas sp. strain RW1: Catabolic genes dispersed on the genome
    • J. Armengaud, B. Happe, and K.N. Timmis Genetic analysis of dioxin dioxygenase of Sphingomonas sp. strain RW1: catabolic genes dispersed on the genome J. Bacteriol. 180 1998 3954 3966
    • (1998) J. Bacteriol. , vol.180 , pp. 3954-3966
    • Armengaud, J.1    Happe, B.2    Timmis, K.N.3
  • 19
    • 0028303531 scopus 로고
    • Enumeration and characterization of the soil microflora from hydrocarbon-contaminated soil sites able to mineralize polycyclic aromatic hydrocarbons (PAH)
    • M. Kästner, M. Breuer-Jammali, and B. Mahro Enumeration and characterization of the soil microflora from hydrocarbon-contaminated soil sites able to mineralize polycyclic aromatic hydrocarbons (PAH) Appl. Microbiol. Biotechnol. 41 1994 267 273
    • (1994) Appl. Microbiol. Biotechnol. , vol.41 , pp. 267-273
    • Kästner, M.1    Breuer-Jammali, M.2    Mahro, B.3
  • 22
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence aligment through sequence weighting, positions-specific gap penalties and weight matric choice
    • J.D. Thompson, D.G. Higgins, and T.J. Gibson CLUSTAL W: improving the sensitivity of progressive multiple sequence aligment through sequence weighting, positions-specific gap penalties and weight matric choice Nucleic Acid Res. 22 1994 4673 4680
    • (1994) Nucleic Acid Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 23
    • 0016610995 scopus 로고
    • Determination of cistron specificity in bacterial ribosomes
    • J. Shine, and L. Dalgarno Determination of cistron specificity in bacterial ribosomes Nature 254 1975 34 38
    • (1975) Nature , vol.254 , pp. 34-38
    • Shine, J.1    Dalgarno, L.2
  • 24
    • 0034029582 scopus 로고    scopus 로고
    • Role of horizontal gene transfer and gene integration in evolution of 1,3-dichloropropene- and 1,2-dibromoethane-degradative pathways
    • G.J. Poelarends, L.A. Kulakov, M.J. Larkin, J.E. van Hylckama-Vlieg, and D.B. Janssen Role of horizontal gene transfer and gene integration in evolution of 1,3-dichloropropene- and 1,2-dibromoethane-degradative pathways J. Bacteriol. 182 2000 2191 2199
    • (2000) J. Bacteriol. , vol.182 , pp. 2191-2199
    • Poelarends, G.J.1    Kulakov, L.A.2    Larkin, M.J.3    Van Hylckama-Vlieg, J.E.4    Janssen, D.B.5
  • 27
    • 0034991776 scopus 로고    scopus 로고
    • Plasmid-encoded phthalate catabolic pathway in Arthrobacter keyseri 12B
    • R. Eaton Plasmid-encoded phthalate catabolic pathway in Arthrobacter keyseri 12B J. Bacteriol. 183 2001 3689 3703
    • (2001) J. Bacteriol. , vol.183 , pp. 3689-3703
    • Eaton, R.1
  • 28
    • 0033034399 scopus 로고    scopus 로고
    • Characterization of IS2112, a new insertion sequence from Rhodococcus, and its relationship with mobile elements belonging to the IS110 family
    • L.A. Kulakov, G.J. Poelarends, D.B. Jansssen, and M.J. Larkin Characterization of IS2112, a new insertion sequence from Rhodococcus, and its relationship with mobile elements belonging to the IS110 family Microbiology 145 1999 561 568
    • (1999) Microbiology , vol.145 , pp. 561-568
    • Kulakov, L.A.1    Poelarends, G.J.2    Jansssen, D.B.3    Larkin, M.J.4
  • 29
    • 0028242876 scopus 로고
    • The role of spontaneous cap domain mutation in haloalkane dehalogenase specificity and evolution
    • F. Pries, A.J. van den Wijngaard, R. Bos, M. Pentenga, and D.B. Janssen The role of spontaneous cap domain mutation in haloalkane dehalogenase specificity and evolution J. Biol. Chem. 269 1994 17490 17494
    • (1994) J. Biol. Chem. , vol.269 , pp. 17490-17494
    • Pries, F.1    Van Den Wijngaard, A.J.2    Bos, R.3    Pentenga, M.4    Janssen, D.B.5
  • 30
    • 0021943518 scopus 로고
    • Improved M13 phage cloning vectors and host strains: Nucleotide sequences of the M13mp18 and pUC119 vectors
    • C. Yanisch-Perron, J. Vieira, and J. Messing Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC119 vectors Gene 33 1985 103 119
    • (1985) Gene , vol.33 , pp. 103-119
    • Yanisch-Perron, C.1    Vieira, J.2    Messing, J.3


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