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Volumn 3, Issue 8, 2004, Pages 823-829

Early molecular events in the photoactive yellow protein: Role of the chromophore photophysics

Author keywords

[No Author keywords available]

Indexed keywords

AMIDE; BENZENE DERIVATIVE; PARA COUMARIC ACID; STILBENE; THIOESTER; YELLOW FLUORESCENT PROTEIN;

EID: 4644243446     PISSN: 1474905X     EISSN: 14749092     Source Type: Journal    
DOI: 10.1039/b400398e     Document Type: Article
Times cited : (53)

References (53)
  • 2
    • 0036815950 scopus 로고    scopus 로고
    • Bioelectronics, the new signals
    • F. Noll D. Braga N. Hampp Bioelectronics, the new signals Biofutur 2002 226 61-65.
    • (2002) Biofutur , vol.226 , pp. 61-65
    • Noll, F.1    Braga, D.2    Hampp, N.3
  • 3
    • 4644355228 scopus 로고    scopus 로고
    • Photoreceptor proteins, “star actors of modern times”: A review of the functional dynamics in the structure of representative members of six different photoreceptor families
    • to be published
    • M. A. van der Horst and K. J. Hellingwerf, Photoreceptor proteins, “star actors of modern times”: A review of the functional dynamics in the structure of representative members of six different photoreceptor families, Acc. Chem. Res., 2003, to be published.
    • (2003) Acc. Chem. Res.
    • van der Horst, M.A.1    Hellingwerf, K.J.2
  • 4
    • 0023152468 scopus 로고
    • Properties of a water-soluble, yellow protein isolated from a halophilic phototrophic bacterium that has photochemical activity analogous to sensory rhodopsin
    • T. E. Meyer E. Yakali M. A. Cusanovich G. Tollin Properties of a water-soluble, yellow protein isolated from a halophilic phototrophic bacterium that has photochemical activity analogous to sensory rhodopsin Biochemistry 1987 26 418-423.
    • (1987) Biochemistry , vol.26 , pp. 418-423
    • Meyer, T.E.1    Yakali, E.2    Cusanovich, M.A.3    Tollin, G.4
  • 5
    • 0027324441 scopus 로고
    • The eubacterium Ectothiorodospira halophila is negatively phototactic, with wavelength dependence that fits the absorption spectrum of the photoactive yellow protein
    • W. W. Sprenger W. D. Hoff J. P. Armitage K. J. Hellingwerf The eubacterium Ectothiorodospira halophila is negatively phototactic, with wavelength dependence that fits the absorption spectrum of the photoactive yellow protein J. Bacteriol. 1993 175 3096-3104.
    • (1993) J. Bacteriol. , vol.175 , pp. 3096-3104
    • Sprenger, W.W.1    Hoff, W.D.2    Armitage, J.P.3    Hellingwerf, K.J.4
  • 6
    • 0028577744 scopus 로고
    • Complete chemical structure of photoactive yellow protein: Novel thioester-linked 4-hydroxycinnamyl chromophore and photocycle chemistry
    • M. Baca G. E. O. Borgstahl M. Boissinot P. M. Burke D. R. Williams K. A. Slater E. D. Getzoff Complete chemical structure of photoactive yellow protein: novel thioester-linked 4-hydroxycinnamyl chromophore and photocycle chemistry Biochemistry 1994 33 14369-14377.
    • (1994) Biochemistry , vol.33 , pp. 14369-14377
    • Baca, M.1    Borgstahl, G.E.O.2    Boissinot, M.3    Burke, P.M.4    Williams, D.R.5    Slater, K.A.6    Getzoff, E.D.7
  • 7
    • 0029110488 scopus 로고
    • 1.4 Å structure of photoactive yellow protein, a cytosolic photoreceptor: Unusual fold, active site, and chromophore
    • G. E. O. Borgstahl D. R. Williams E. D. Getzoff 1.4 Å structure of photoactive yellow protein, a cytosolic photoreceptor: unusual fold, active site, and chromophore Biochemistry 1995 34 6278-6287.
    • (1995) Biochemistry , vol.34 , pp. 6278-6287
    • Borgstahl, G.E.O.1    Williams, D.R.2    Getzoff, E.D.3
  • 8
    • 0028868422 scopus 로고
    • Reconstitution photoactive yellow protein from apoprotein and p-coumaric acid derivatives
    • Y. Imamoto T. Ito M. Kataoka F. Tokunaga Reconstitution photoactive yellow protein from apoprotein and p-coumaric acid derivatives FEBS Lett. 1995 374 157-160.
    • (1995) FEBS Lett. , vol.374 , pp. 157-160
    • Imamoto, Y.1    Ito, T.2    Kataoka, M.3    Tokunaga, F.4
  • 9
    • 0028832513 scopus 로고
    • Resonance Raman evidence that thioester-linked 4-hydroxycinnamyl chromophore of photoactive yellow protein is deprotonated
    • M. Kim R. A. Mathies W. D. Hoff K. J. Hellingwerf Resonance Raman evidence that thioester-linked 4-hydroxycinnamyl chromophore of photoactive yellow protein is deprotonated Biochemistry 1995 34 12669-12672.
    • (1995) Biochemistry , vol.34 , pp. 12669-12672
    • Kim, M.1    Mathies, R.A.2    Hoff, W.D.3    Hellingwerf, K.J.4
  • 10
    • 0037657894 scopus 로고    scopus 로고
    • Photoactive yellow protein: A prototypic PAS domain sensory protein and development of a common signaling mechanism
    • M. A. Cusanovich T. E. Meyer Photoactive yellow protein: a prototypic PAS domain sensory protein and development of a common signaling mechanism Biochemistry 2003 42 4759-4770.
    • (2003) Biochemistry , vol.42 , pp. 4759-4770
    • Cusanovich, M.A.1    Meyer, T.E.2
  • 11
    • 0037468225 scopus 로고    scopus 로고
    • Photoactive yellow protein, a new type of photoreceptor protein: Will this “yellow lab” bring us where we want to go?
    • K. J. Hellingwerf J. Hendriks T. Gensch Photoactive yellow protein, a new type of photoreceptor protein: will this “yellow lab” bring us where we want to go? J. Phys. Chem. A 2003 107 1082-1094.
    • (2003) J. Phys. Chem. A , vol.107 , pp. 1082-1094
    • Hellingwerf, K.J.1    Hendriks, J.2    Gensch, T.3
  • 12
    • 0029964634 scopus 로고    scopus 로고
    • Evidence for trans–cis isomerization of the p-coumaric acid chromophore as photochemical basis of the photocycle of photoactive yellow protein
    • R. Kort H. Vonk X. Xu W. D. Hoff W. Crielaard K. J. Hellingwerf Evidence for trans–cis isomerization of the p-coumaric acid chromophore as photochemical basis of the photocycle of photoactive yellow protein FEBS Lett. 1996 382 73-78.
    • (1996) FEBS Lett. , vol.382 , pp. 73-78
    • Kort, R.1    Vonk, H.2    Xu, X.3    Hoff, W.D.4    Crielaard, W.5    Hellingwerf, K.J.6
  • 14
    • 0032510475 scopus 로고    scopus 로고
    • Structure at 0.85 Å resolution of an early protein photocycle intermediate
    • U. K. Genick S. M. Soltis P. Kuhn I. L. Canestrelli E. D. Getzoff Structure at 0.85 Å resolution of an early protein photocycle intermediate Nature 1998 392 206-209.
    • (1998) Nature , vol.392 , pp. 206-209
    • Genick, U.K.1    Soltis, S.M.2    Kuhn, P.3    Canestrelli, I.L.4    Getzoff, E.D.5
  • 15
    • 0035923399 scopus 로고    scopus 로고
    • A molecular movie at 1.8 angstrom resolution displays the photocycle of photoactive yellow protein, a eubacterial blue-light receptor, from nanoseconds to seconds
    • Z. Ren B. Perman V. Srajer T.-Y. Teng C. Pradervand D. Bourgeois F. Schotte T. Ursby R. Kort M. Wulff K. Moffat A molecular movie at 1.8 angstrom resolution displays the photocycle of photoactive yellow protein, a eubacterial blue-light receptor, from nanoseconds to seconds Biochemistry 2001 40 13788-13801.
    • (2001) Biochemistry , vol.40 , pp. 13788-13801
    • Ren, Z.1    Perman, B.2    Srajer, V.3    Teng, T.-Y.4    Pradervand, C.5    Bourgeois, D.6    Schotte, F.7    Ursby, T.8    Kort, R.9    Wulff, M.10    Moffat, K.11
  • 16
    • 0031584256 scopus 로고    scopus 로고
    • Femtosecond-picosecond fluorescence studies on excited state dynamics of photoactive yellow protein from Ectothiorhodospira halophila
    • H. Chosrowjan N. Mataga N. Nakashima Y. Imamoto F. Tokunaga Femtosecond-picosecond fluorescence studies on excited state dynamics of photoactive yellow protein from Ectothiorhodospira halophila Chem. Phys. Lett. 1997 270 267-272.
    • (1997) Chem. Phys. Lett. , vol.270 , pp. 267-272
    • Chosrowjan, H.1    Mataga, N.2    Nakashima, N.3    Imamoto, Y.4    Tokunaga, F.5
  • 19
    • 0031808072 scopus 로고    scopus 로고
    • New photocycle intermediate in the photoactive yellow protein from Ectothiorhododospira halophila: Picosecond transient absorption spectroscopy
    • L. Ujj S. Devanathan T. E. Meyer M. A. Cusanovich G. Tollin G. H. Atkinson New photocycle intermediate in the photoactive yellow protein from Ectothiorhododospira halophila: picosecond transient absorption spectroscopy Biophys. J. 1998 75 406-412.
    • (1998) Biophys. J. , vol.75 , pp. 406-412
    • Ujj, L.1    Devanathan, S.2    Meyer, T.E.3    Cusanovich, M.A.4    Tollin, G.5    Atkinson, G.H.6
  • 20
    • 0032809454 scopus 로고    scopus 로고
    • Femtosecond spectroscopic observations of initial intermediates in the photocycle of the photoactive yellow protein from Ectothiorhodospira halophila
    • S. Devanathan A. Pacheco L. Ujj M. A. Cusanovich G. Tollin S. Lin N. Woodbury Femtosecond spectroscopic observations of initial intermediates in the photocycle of the photoactive yellow protein from Ectothiorhodospira halophila Biophys. J. 1999 77 1017-1023.
    • (1999) Biophys. J. , vol.77 , pp. 1017-1023
    • Devanathan, S.1    Pacheco, A.2    Ujj, L.3    Cusanovich, M.A.4    Tollin, G.5    Lin, S.6    Woodbury, N.7
  • 21
    • 0001396330 scopus 로고    scopus 로고
    • Effects of modification of protein nanospace structure and change of temperature on the femtosecond to picosecond fluorescence dynamics of photoactive yellow protein
    • N. Mataga H. Chosrowjan Y. Shibata Y. Imamoto F. Tokunaga Effects of modification of protein nanospace structure and change of temperature on the femtosecond to picosecond fluorescence dynamics of photoactive yellow protein J. Phys. Chem. B 2000 104 5191-5199.
    • (2000) J. Phys. Chem. B , vol.104 , pp. 5191-5199
    • Mataga, N.1    Chosrowjan, H.2    Shibata, Y.3    Imamoto, Y.4    Tokunaga, F.5
  • 22
    • 0035918547 scopus 로고    scopus 로고
    • Primary photoreaction of photoactive yellow protein studied by subpicosecond-nanosecond spectroscopy
    • Y. Imamoto M. Kataoka F. Tokunaga T. Asahi H. Masuhara Primary photoreaction of photoactive yellow protein studied by subpicosecond-nanosecond spectroscopy Biochemistry 2001 40 6047-6052.
    • (2001) Biochemistry , vol.40 , pp. 6047-6052
    • Imamoto, Y.1    Kataoka, M.2    Tokunaga, F.3    Asahi, T.4    Masuhara, H.5
  • 24
    • 0037196501 scopus 로고    scopus 로고
    • Ultrafast photoinduced reaction dynamics of photoactive yellow protein (PYP): Observation of coherent oscillations in the femtosecond fluorescence decay dynamics
    • N. Mataga H. Chosrowjan Y. Shibata Y. Imamoto M. Kataoka F. Tokunaga Ultrafast photoinduced reaction dynamics of photoactive yellow protein (PYP): observation of coherent oscillations in the femtosecond fluorescence decay dynamics Chem. Phys. Lett. 2002 352 220-225.
    • (2002) Chem. Phys. Lett. , vol.352 , pp. 220-225
    • Mataga, N.1    Chosrowjan, H.2    Shibata, Y.3    Imamoto, Y.4    Kataoka, M.5    Tokunaga, F.6
  • 25
    • 0001173178 scopus 로고    scopus 로고
    • Environmental effects on the femtosecond-picosecond fluorescence dynamics of photoactive yellow protein: Chromophores in aqueous solutions and in protein nanospaces modified by site-directed mutagenesis
    • H. Chosrowjan N. Mataga Y. Shibata Y. Imamoto F. Tokunaga Environmental effects on the femtosecond-picosecond fluorescence dynamics of photoactive yellow protein: chromophores in aqueous solutions and in protein nanospaces modified by site-directed mutagenesis J. Phys. Chem. B 1998 102 7695-7698.
    • (1998) J. Phys. Chem. B , vol.102 , pp. 7695-7698
    • Chosrowjan, H.1    Mataga, N.2    Shibata, Y.3    Imamoto, Y.4    Tokunaga, F.5
  • 26
    • 0034335322 scopus 로고    scopus 로고
    • Probing the primary event in the photocycle of photoactive yellow protein using photochemical hole-burning technique
    • T. M. Masciangioli S. Devanathan M. A. Cusanovich G. Tollin M. A. El-Sayed Probing the primary event in the photocycle of photoactive yellow protein using photochemical hole-burning technique Photochem. Photobiol. 2000 72 639-644.
    • (2000) Photochem. Photobiol. , vol.72 , pp. 639-644
    • Masciangioli, T.M.1    Devanathan, S.2    Cusanovich, M.A.3    Tollin, G.4    El-Sayed, M.A.5
  • 27
    • 0035859406 scopus 로고    scopus 로고
    • Photocycle dynamics and vibrational spectroscopy of the E46Q mutant of photoactive yellow protein
    • Y. Zhou L. Ujj T. E. Meyer M. A. Cusanovich G. H. Atkinson Photocycle dynamics and vibrational spectroscopy of the E46Q mutant of photoactive yellow protein J. Phys. Chem. A 2001 105 5719-5726.
    • (2001) J. Phys. Chem. A , vol.105 , pp. 5719-5726
    • Zhou, Y.1    Ujj, L.2    Meyer, T.E.3    Cusanovich, M.A.4    Atkinson, G.H.5
  • 28
    • 0034805059 scopus 로고    scopus 로고
    • Early photocycle kinetic behavior of the E46A and Y42F mutants of photoactive yellow protein: Femtosecond spectroscopy
    • S. Devanathan S. Lin M. A. Cusanovich N. Woodbury G. Tollin Early photocycle kinetic behavior of the E46A and Y42F mutants of photoactive yellow protein: Femtosecond spectroscopy Biophys. J. 2001 81 2314-2319.
    • (2001) Biophys. J. , vol.81 , pp. 2314-2319
    • Devanathan, S.1    Lin, S.2    Cusanovich, M.A.3    Woodbury, N.4    Tollin, G.5
  • 29
    • 0037777726 scopus 로고    scopus 로고
    • Ultrafast photoreactions in protein nanospaces as revealed by fs fluorescence dynamics measurements on photoactive yellow protein and related systems
    • N. Mataga H. Chosrowjan S. Taniguchi N. Hamada F. Tokunaga Y. Imamoto M. Kataoka Ultrafast photoreactions in protein nanospaces as revealed by fs fluorescence dynamics measurements on photoactive yellow protein and related systems Phys. Chem. Chem. Phys. 2003 5 2454-2460.
    • (2003) Phys. Chem. Chem. Phys. , vol.5 , pp. 2454-2460
    • Mataga, N.1    Chosrowjan, H.2    Taniguchi, S.3    Hamada, N.4    Tokunaga, F.5    Imamoto, Y.6    Kataoka, M.7
  • 30
    • 0000340302 scopus 로고    scopus 로고
    • Primary events in the photoactive yellow protein chromophore in solution
    • P. Changenet-Barret P. Plaza M. M. Martin Primary events in the photoactive yellow protein chromophore in solution Chem. Phys. Lett. 2001 336 439-444.
    • (2001) Chem. Phys. Lett. , vol.336 , pp. 439-444
    • Changenet-Barret, P.1    Plaza, P.2    Martin, M.M.3
  • 36
    • 21544461815 scopus 로고
    • Generation of tunable subpicosecond pulses using low-Q dye cavities
    • N. Dai Hung P. Plaza M. M. Martin Y. H. Meyer Generation of tunable subpicosecond pulses using low-Q dye cavities Appl. Opt. 1992 31 7046-7058.
    • (1992) Appl. Opt. , vol.31 , pp. 7046-7058
    • Dai Hung, N.1    Plaza, P.2    Martin, M.M.3    Meyer, Y.H.4
  • 38
    • 0029731183 scopus 로고    scopus 로고
    • Spectral tuning, fluorescence, and photoactivity in hybrids of photoactive yellow protein, reconstituted with native or modified chromophores
    • A. R. Kroon W. D. Hoff H. P. M. Fennema G.-J. Koomen J. W. Verhoeven W. Crielaard K. J. Hellingwerf Spectral tuning, fluorescence, and photoactivity in hybrids of photoactive yellow protein, reconstituted with native or modified chromophores J. Biol. Chem. 1996 271 31949-31956.
    • (1996) J. Biol. Chem. , vol.271 , pp. 31949-31956
    • Kroon, A.R.1    Hoff, W.D.2    Fennema, H.P.M.3    Koomen, G.-J.4    Verhoeven, J.W.5    Crielaard, W.6    Hellingwerf, K.J.7
  • 41
    • 0035846381 scopus 로고    scopus 로고
    • Spectral tuning of photoactive yellow protein. Theoretical and experimental analysis of medium effects on the absorption spectrum of the chromophore
    • M. Yoda H. Houjou Y. Inoue M. Sakurai Spectral tuning of photoactive yellow protein. Theoretical and experimental analysis of medium effects on the absorption spectrum of the chromophore J. Phys. Chem. B 2001 105 9887-9895.
    • (2001) J. Phys. Chem. B , vol.105 , pp. 9887-9895
    • Yoda, M.1    Houjou, H.2    Inoue, Y.3    Sakurai, M.4
  • 42
    • 0037140791 scopus 로고    scopus 로고
    • Gas-phase photochemistry of the photoactive yellow protein chromophore trans-p-coumaric acid
    • W. L. Ryan D. J. Gordon D. H. Levy Gas-phase photochemistry of the photoactive yellow protein chromophore trans-p-coumaric acid J. Am. Chem. Soc. 2002 124 6194-6201.
    • (2002) J. Am. Chem. Soc. , vol.124 , pp. 6194-6201
    • Ryan, W.L.1    Gordon, D.J.2    Levy, D.H.3
  • 44
    • 0035902354 scopus 로고    scopus 로고
    • Density functional study of the photoactive yellow protein’s chromophore
    • A. Sergi M. Grüning M. Ferrario F. Buda Density functional study of the photoactive yellow protein’s chromophore J. Phys. Chem. B 2001 105 4386-4391.
    • (2001) J. Phys. Chem. B , vol.105 , pp. 4386-4391
    • Sergi, A.1    Grüning, M.2    Ferrario, M.3    Buda, F.4
  • 45
    • 0035836710 scopus 로고    scopus 로고
    • On the absorbance changes in the photocycle of the photoactive yellow protein: A quantum-chemical analysis
    • V. Molina M. Merchán On the absorbance changes in the photocycle of the photoactive yellow protein: A quantum-chemical analysis Proc. Natl. Acad. Sci. USA 2001 98 4299-4304.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 4299-4304
    • Molina, V.1    Merchán, M.2
  • 46
    • 0036681339 scopus 로고    scopus 로고
    • Signal transduction in the photoactive yellow protein. I. Photon absorption and the isomerization of the chromophore
    • G. Groenhof M. F. Lensink H. J. C. Berendsen J. G. Snijders A. E. Mark Signal transduction in the photoactive yellow protein. I. Photon absorption and the isomerization of the chromophore Proteins 2002 48 202-211.
    • (2002) Proteins , vol.48 , pp. 202-211
    • Groenhof, G.1    Lensink, M.F.2    Berendsen, H.J.C.3    Snijders, J.G.4    Mark, A.E.5
  • 47
    • 84989696264 scopus 로고
    • Low temperature absorbance and fluorescence spectroscopy of the photoactive yellow protein from Ectothiorhodospira halophila
    • W. D. Hoff S. L. S. Kwa R. van Grondelle K. J. Hellingwerf Low temperature absorbance and fluorescence spectroscopy of the photoactive yellow protein from Ectothiorhodospira halophila Photochem. Photobiol. 1992 56 529-539.
    • (1992) Photochem. Photobiol. , vol.56 , pp. 529-539
    • Hoff, W.D.1    Kwa, S.L.S.2    van Grondelle, R.3    Hellingwerf, K.J.4
  • 48
    • 0029803844 scopus 로고    scopus 로고
    • Photoreaction cycle of photoreactive yellow protein from Ectothiorhodospira halophila studied by low-temperature spectroscopy
    • Y. Imamoto M. Kataoka F. Tokunaga Photoreaction cycle of photoreactive yellow protein from Ectothiorhodospira halophila studied by low-temperature spectroscopy Biochemistry 1996 35 14047-14053.
    • (1996) Biochemistry , vol.35 , pp. 14047-14053
    • Imamoto, Y.1    Kataoka, M.2    Tokunaga, F.3
  • 49
    • 0001862669 scopus 로고
    • Nonexponential solvation dynamics of simple liquids and mixtures
    • W. Jarzeba G. C. Walker A. E. Johnson P. F. Barbara Nonexponential solvation dynamics of simple liquids and mixtures Chem. Phys. 1991 152 57-68.
    • (1991) Chem. Phys. , vol.152 , pp. 57-68
    • Jarzeba, W.1    Walker, G.C.2    Johnson, A.E.3    Barbara, P.F.4
  • 51
    • 0035965168 scopus 로고    scopus 로고
    • An ultrafast polarisation spectroscopy study of internal conversion and orientational relaxation of the chromophore of the green fluorescent protein
    • K. L. Litvinenko N. M. Webber S. R. Meech An ultrafast polarisation spectroscopy study of internal conversion and orientational relaxation of the chromophore of the green fluorescent protein Chem. Phys. Lett. 2001 346 47-53.
    • (2001) Chem. Phys. Lett. , vol.346 , pp. 47-53
    • Litvinenko, K.L.1    Webber, N.M.2    Meech, S.R.3
  • 52
    • 0035940246 scopus 로고    scopus 로고
    • Radiationless relaxation in a synthetic analogue of the green fluorescent protein chromophore
    • N. M. Webber K. L. Litvinenko S. R. Meech Radiationless relaxation in a synthetic analogue of the green fluorescent protein chromophore J. Phys. Chem. B 2001 105 8036-8039.
    • (2001) J. Phys. Chem. B , vol.105 , pp. 8036-8039
    • Webber, N.M.1    Litvinenko, K.L.2    Meech, S.R.3
  • 53
    • 0037960394 scopus 로고    scopus 로고
    • Stark spectroscopy on photoactive yellow protein, E46Q, and a nonisomerizing derivative, probes photo-induced charge motion
    • L. L. Premvardhan M. A. van der Horst K. J. Hellingwerf R. van Grondelle Stark spectroscopy on photoactive yellow protein, E46Q, and a nonisomerizing derivative, probes photo-induced charge motion Biophys. J. 2003 84 3226-3239.
    • (2003) Biophys. J. , vol.84 , pp. 3226-3239
    • Premvardhan, L.L.1    van der Horst, M.A.2    Hellingwerf, K.J.3    van Grondelle, R.4


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