Structure of an archaeal alanine:glyoxylate aminotransferase

Acta Crystallographica Section D: Biological Crystallography

Volumn 64, Issue 6, 2008, Pages 696-699

  Sakuraba, Haruhiko ^a   Yoneda, Kazunari ^b   Takeuchi, Kiyo ^a   Tsuge, Hideaki ^c   Katunuma, Nobuhiko ^d   Ohshima, Toshihisa ^d  

^a UNIVERSITY OF TOKUSHIMA   (Japan)

^b TOKAI UNIVERSITY   (Japan)

^c TOKUSHIMA BUNRI UNIVERSITY   (Japan)

^d KYUSHU UNIVERSITY   (Japan)

Author keywords

Alanine:glyoxylate aminotransferases; Archaea; Thermococcus litoralis

Indexed keywords

ALANINE GLYOXYLATE AMINOTRANSFERASE; ALANINE-GLYOXYLATE TRANSAMINASE; AMINOTRANSFERASE; RECOMBINANT PROTEIN;

ARTICLE; CHEMICAL STRUCTURE; CHEMISTRY; ENZYME ACTIVE SITE; ENZYME SPECIFICITY; ENZYMOLOGY; GENETICS; PROTEIN QUATERNARY STRUCTURE; PROTEIN TERTIARY STRUCTURE; SPECIES DIFFERENCE; THERMOCOCCUS; THERMUS THERMOPHILUS; X RAY CRYSTALLOGRAPHY;

CATALYTIC DOMAIN; CRYSTALLOGRAPHY, X-RAY; MODELS, MOLECULAR; PROTEIN STRUCTURE, QUATERNARY; PROTEIN STRUCTURE, TERTIARY; RECOMBINANT PROTEINS; SPECIES SPECIFICITY; SUBSTRATE SPECIFICITY; THERMOCOCCUS; THERMUS THERMOPHILUS; TRANSAMINASES;

ARCHAEA; THERMOCOCCUS; THERMOCOCCUS LITORALIS; THERMUS THERMOPHILUS;

EID: 45749127391     PISSN: 09074449     EISSN: 13990047     Source Type: Journal    
DOI: 10.1107/S0907444908006732     Document Type: Article

References (27)

1. Brünger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J.-S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, R. J., Rice, L. M., Simonson, T. & Warren, G. L. (1998). Acta Cryst. D54, 905-921.
2. Chon, H., Matsumura, H., Koga, Y., Takano, K. & Kanaya, S. (2005). Proteins, 61, 685-688.
3. Chon, H., Matsumura, H., Shimizu, S., Maeda, N., Koga, Y., Takano, K. & Kanaya, S. (2005). Acta Cryst. F61, 319-322.
4. Danpure, C. J. (2001). The Molecular and Metabolic Bases of Inherited Disease, edited by C. R. Scriver, A. L. Beaudet, W. S. Sly, D. Valle, B. Childs, K. W. Kinzler & B. Vogelstein, pp. 3323-3367. New York: McGraw-Hill.
5. Han, G. W. et al. (2005). Proteins, 58, 971-975.
6. Han, Q., Robinson, H., Gao, Y. G., Vogelaar, N., Wilson, S. R., Rizzi, M. & Li, J. (2006). J. Biol. Chem. 281, 37175-37182.
7. Herbert, R. A. & Macfarlane, G. T. (1980). Arch. Microbiol. 128, 233-238.
8. Holm, L. & Sander, C. (1998). Nucleic Acids Res. 26, 316-319.
9. Koide, Y., Honma, M. & Shimomura, T. (1977). Agric. Biol. Chem. 41, 781-784.
10. Laskowski, R. A., MacArthur, M. W., Moss, D. S. & Thornton, J. M. (1993). J. Appl. Cryst. 26, 283-291.
11. LeMaster, D. M. & Richards, F. M. (1985). Biochemistry, 24, 7263-7268.
12. McRee, D. E. (1999). J. Struct. Biol. 125, 156-165.
13. Mehta, P. K., Hale, T. I. & Christen, P. (1993). Eur. J. Biochem. 214, 549-561.
14. Meyer, P., Liger, D., Leulliot, N., Quevillon-Cheruel, S., Zhou, C. Z., Borel, F., Ferrer, J. L., Poupon, A., Janin, J. & van Tilbeurgh, H. (2005). Biochimie, 87, 1041-1047.
15. Murshudov, G. N., Vagin, A. A. & Dodson, E. J. (1997). Acta Cryst. D53, 240-255.
16. Nakai, T., Okada, K., Akutsu, S., Miyahara, I., Kawaguchi, S., Kato, R., Kuramitsu, S. & Hirotsu, K. (1999). Biochemistry, 38, 2413-2424.
17. Nobe, Y., Kawaguchi, S., Ura, H., Nakai, T., Hirotsu, K., Kato, R. & Kuramitsu, S. (1998). J. Biol. Chem. 273, 29554-29564.
18. Noguchi, T., Okuno, E., Takada, Y., Minatogawa, Y., Okai, K. & Kido, R. (1978). Biochem. J. 169, 113-122.
19. Noguchi, T. & Takada, Y. (1979). Arch. Biochem. Biophys. 196, 645-647.
20. Ohshima, T., Nunoura-Kominato, N., Kudome, T. & Sakuraba, H. (2001). Eur. J. Biochem. 268, 4740-4747.
21. Rossi, F., Garavaglia, S., Giovenzana, G. B., Arcà, B., Li, J. & Rizzi, M. (2006). Proc. Natl Acad. Sci. USA, 103, 5711-5716.
22. Sakuraba, H., Fujiwara, S. & Noguchi, T. (1991). Arch. Biochem. Biophys. 286, 453-460.
23. Sakuraba, H., Kawakami, R., Takahashi, H. & Ohshima, T. (2004). J. Bacteriol. 186, 5513-5518.
24. Takada, Y. & Noguchi, T. (1985). Biochem. J. 231, 157-163.
25. Terwilliger, T. C. (1999). Acta Cryst. D55, 1863-1871.
26. Terwilliger, T. C. & Berendzen, J. (1999). Acta Cryst. D55, 849-861.
27. Zhang, X., Roe, S. M., Hou, Y., Bartlam, M., Rao, Z., Pearl, L. H. & Danpure, C. J. (2003). J. Mol. Biol. 331, 643-652.