Study of the interaction of GFG tripeptide with cesium perfluorooctanoate micelles by means of NMR spectroscopy and MD simulations

Langmuir

Volumn 24, Issue 11, 2008, Pages 5809-5815

  Pizzanelli, Silvia ^a   Forte, Claudia ^a   Monti, Susanna ^a  

^a AREA DELLA RICERCA   (Italy)

Author keywords

[No Author keywords available]

Indexed keywords

ALKALI METALS; CESIUM; COLLOIDS; MICROFLUIDICS; NUCLEAR MAGNETIC RESONANCE; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY;

BI-LAYERS; GLYCINE (GLY); ISOTROPIC PHASE; MD SIMULATIONS; NMR SPECTROS COPY; PERFLUOROOCTANOATE (PFO); TRI PEPTIDES;

FLOW INTERACTIONS;

CESIUM PERFLUOROOCTANOATE; DIVALENT CATION; FLUOROCARBON; MANGANESE; OLIGOPEPTIDE; ORGANOMETALLIC COMPOUND;

ARTICLE; CHEMICAL MODEL; CHEMISTRY; COMPUTER SIMULATION; HYDROGEN BOND; MICELLE; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY;

CATIONS, DIVALENT; COMPUTER SIMULATION; FLUOROCARBONS; HYDROGEN BONDING; MAGNETIC RESONANCE SPECTROSCOPY; MANGANESE; MICELLES; MODELS, CHEMICAL; OLIGOPEPTIDES; ORGANOMETALLIC COMPOUNDS;

EID: 45749120849     PISSN: 07437463     EISSN: None     Source Type: Journal    
DOI: 10.1021/la703756u     Document Type: Article

References (62)

1. Arora, A.; Tamm, L. K. Curr. Opin. Struct. Biol. 2001, 11, 540-547.
2. Marcotte, I.; Auger, M. Concepts Magn. Res. A 2005, 24A, 17-37.
3. Chandrasekhar, I.; van Gunsteren, W. F.; Zandomeneghi, G.; Williamson, P. T. F.; Meier, B. H. J. Am. Chem. Soc. 2006, 128, 159-170.
4. Hicks, R. P.; Beard, D. J.; Young, J. K. Biopolymers 1992, 32, 85-96.
5. Palian, M. M.; Boguslavsky, V. I.; O'Brien, D. F.; Polt, R. J. Am. Chem. Soc. 2003, 125, 5823-5831.
6. Chatterjee, C.; Majumder, B.; Mukhopadhyay, C. J. Phys. Chem. B 2004, 108, 7430-7436.
7. Brown, J. W.; Huestis, W. H. J. Phys. Chem. 1993, 97, 2967-2973.
8. Fielding, L. Tetrahedron 2000, 56, 6151-6170.
9. White, S. H.; Wimley, W. C. Biochim. Biophys. Acta 1998, 1376, 339-352.
10. Mayer, P. T.; Xiang, T. X.; Niemi, R.; Anderson, B. D. Biochemistry 2003, 42, 1624-1636.
11. Boden, N.; Corne, S. A.; Jolley, K. W. J. Phys. Chem. 1987, 91, 4092-4105.
12. Poon, C. D.; Samulski, E. T.; Weise, C. F.; Weisshaar, J. C. J. Am. Chem. Soc. 2000, 122, 5642-5643.
13. Kimura, A.; Kuni, N.; Fujiwara, H. J. Am. Chem. Soc. 1997, 119, 4719-4725.
14. Kimura, A.; Takamoto, K.; Fujiwara, H. J. Am. Chem. Soc. 1998, 120, 9656-9661.
15. Ye, B.; Hadjmohammadi, M.; Khaledi, M. G. J. Chromatogr., A 1995, 692, 291-300.
16. Krafft, M. P.; Riess, J. G. Biochimie 1998, 80, 489-514.
17. Krafft, M. P.; Riess, J. G. J. Polym. Sci., Part A: Polym. Chem. 2007, 45, 1185-1198.
18. Pizzanelli, S.; Forte, C.; Monti, S.; Schweitzer-Stenner, R. J. Phys. Chem. B 2008, 112, 1251-1261.
19. Newmark, R. A.; Miller, M. A. J. Phys. Chem. 1971, 75, 505-508.
20. van der Spoel, D. Biochem. Cell Biol. 1998, 76, 164-170.
21. Vestues, P. I.; Martin, R. B. J. Am. Chem. Soc. 1980, 102, 7906-7909.
22. Tsangaris, J. M.; Chang, J. W.; Martin, R. B. J. Am. Chem. Soc. 1969, 91, 726-731.
23. Tsangaris, J. M.; Martin, R. B. J. Am. Chem. Soc. 1970, 92, 4255-4260.
24. Mikhailov, D. V.; Washington, L.; Voloshin, A. M.; Daragan, V. A.; Mayo, K. H. Biopolymers 1999, 49, 373-383.
25. Herne, T. M.; Ahern, A. M.; Garrell, R. L. J. Am. Chem. Soc. 1991, 113, 846-854.
26. Balasubramanian, S.; Bagchi, B. J. Phys. Chem. B 2001, 105, 12529-12533.
27. Mei, D.; O'Connell, J. P. Langmuir 2002, 18, 9067-9079.
28. Nordstierna, L.; Pavel, V.; Furo, I. J. Phys. Chem. B 2006, 110, 25775-25781.
29. Srinivasan, V.; Blankschtein, D. Langmuir 2005, 21, 1647-1660.
30. Weise, C. F.; Weisshaar, J. C. J. Phys. Chem. B 2003, 107, 3265-3277.
31. Spectral Data Base System (SDBS), catalogue number 4334, 4336, 4373.
32. Garbow, J. R.; Weitekamp, D. P.; Pines, A. Chem. Phys. Lett. 1982, 93, 504-509.
33. Geppi, M.; Forte, C. J. Magn. Reson. 1999, 137, 177-185.
34. Marat, K. Spin Works; University of Manitoba: Winnipeg, Manitoba, Canada; http://www.umanitoba.ca/chemistry/nmr/spinworks/
35. Vogel, H. FEBS Lett. 1981, 134, 37-42.
36. Moroi, Y. J. Phys. Chem. 1980, 84, 2186-2190.
37. Deber, C. M.; Behnam, B. A. Proc. Natl. Acad. Sci. U.S.A. 1984, 81, 61-65.
38. Case, D. A.; Darden, T. A.; Cheatham, T. E., III; Simmerling, C. L.; Wang, J.; Duke, R. E.; Luo, R.; Merz, K. M.; Pearlman, D. A.; Crowley, M.; Walker, R. C.; Zhang, W.; Wang, B.; Hayik, S.; Roitberg, A.; Seabra, G.; Wong, K. F.; Paesani, F.; Wu, X.; Brozell, S.; Tsui, V.; Gohlke, H.; Yang, L.; Tan, C.; Mongan, J.; Hornak, V.; Cui, G.; Beroza, P.; Mathews, D. H.; Schafmeister, C.; Ross, W. S.; Kollman, P. A. AMBER 9; University of California: San Francisco, 2006.
39. Balasubramanian, S.; Bagchi, B. J. Phys. Chem. B 2002, 106, 3668-3672.
40. Duan, Y.; Wu, C.; Chowdhury, S.; Lee, M. C.; Xiong, G.; Zhang, W.; Yang, R.; Cieplak, P.; Luo, R.; Lee, T. J. Comput. Chem. 2003, 24, 1999-2012.
41. Lee, M. C.; Duan, Y. Proteins 2004, 55, 620-634.
42. Sprik, M.; Röthlinsberger, U.; Klein, M. L. Mol. Phys. 1999, 97, 355-373.
43. Cieplak, P.; Cornell, W. D.; Bayly, C. I.; Kollman, P. A. J. Comput. Chem. 1995, 16, 1357-1377.
44. Bayly, C. I.; Cieplak, P.; Cornell, W. D.; Kollman, P. A. J. Phys. Chem. 1993, 97, 10269-10280.
45. Jorgensen, W. L. J. Am. Chem. Soc. 1981, 103, 335-350.
46. Ryckaert, J. P.; Ciccotti, G.; Berendsen, H. J. C. J. Comput. Phys. 1977, 23, 327-341.
47. Andrea, T. A.; Swope, W. C.; Andersen, H. C. J. Chem. Phys. 1983, 79, 4576-4584.
48. Andersen, H. C. J. Chem. Phys. 1980, 72, 2384-2393.
49. Berendsen, H. J. C.; Postma, J. P. M.; van Gunsteren, W. F.; DiNola, A.; Haak, J. R. J. Chem. Phys. 1984, 81, 3684-3690.
50. UCSF Chimera, version 1; University of California: San Francisco, 2006.
51. Mezei, M. Mol. Simul. 1989, 3, 301-313.
52. van Gunsteren, W. F.; Weiner, P. K. Computer Simulation of Biomolecular Systems: Theoretical and Experimental Applications; ESCOM Science: Leiden, The Netherlands, 1989.
53. Monti, S. J. Phys. Chem. C 2007, 111, 6086-6094.
54. Morlino, V. J.; Martin, R. B. J. Am. Chem. Soc. 1967, 89, 3107-3111.
55. Nakamura, A.; Jardetzky, O. Proc. Natl. Acad. Sci. U.S.A. 1967, 58, 2212-2219.
56. Beeson, C.; Dix, T. A. J. Chem. Soc., Perkin Trans. 2 1991, 1913-1918.
57. Holmes, M. C.; Reynolds, D. J.; Boden, N. J. Phys. Chem. 1987, 97, 5257-5262.
58. Seelig, J.; Ganz, P. Biochemistry 1991, 30, 9354-9359.
59. Seelig, J. Biochim. Biophys. Acta 1997, 1331, 103-116.
60. An, Y. J.; Jeong, S. W. J. Colloid Interface Sci. 2001, 242, 419-424.
61. Poole, C. F.; Poole, S. K.; Abraham, M. H. J. Chromatogr., A 1998, 798, 207-222.
62. Fuguet, E.; Ràfols, C.; Bosch, E.; Rosés, M.; Abraham, M. H. J. Chromatogr., A 2001, 907, 257-265.