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Volumn 164, Issue 3, 2004, Pages 396-414

Testing species boundaries in an ancient species complex with deep phylogeographic history: Genus Xantusia (Squamata: Xantusiidae)

Author keywords

Bayesian analysis; Maximum likelihood; mtDNA; Nested clade analysis; Phylogeography; Species boundaries; Xantusia

Indexed keywords

CYTOCHROME B; MITOCHONDRIAL DNA; PROTEIN SUBUNIT; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE DEHYDROGENASE;

EID: 4544386077     PISSN: 00030147     EISSN: None     Source Type: Journal    
DOI: 10.1086/381404     Document Type: Article
Times cited : (42)

References (116)
  • 1
    • 0036667688 scopus 로고    scopus 로고
    • The role of nuclear genes in intraspecific evolutionary inference: Genealogy of the transferrin gene in the brown trout
    • Antunes, A., A. R. Templeton, R. Guyomard, and P. Alexandrino. 2002. The role of nuclear genes in intraspecific evolutionary inference: genealogy of the transferrin gene in the brown trout. Molecular Biology and Evolution 19:1272-1287.
    • (2002) Molecular Biology and Evolution , vol.19 , pp. 1272-1287
    • Antunes, A.1    Templeton, A.R.2    Guyomard, R.3    Alexandrino, P.4
  • 2
    • 0028154142 scopus 로고
    • Mitochondrial DNA sequence divergence and phylogenetic relationships among eight chromosome races of the Sceloperus grammicus complex (Phrynosomatidae) in Central Mexico
    • Arévalo, E., S. K. Davis, and J. W. Sites, Jr. 1994. Mitochondrial DNA sequence divergence and phylogenetic relationships among eight chromosome races of the Sceloperus grammicus complex (Phrynosomatidae) in Central Mexico. Systematic Biology 43:387-418.
    • (1994) Systematic Biology , vol.43 , pp. 387-418
    • Arévalo, E.1    Davis, S.K.2    Sites Jr., J.W.3
  • 4
    • 0034018795 scopus 로고    scopus 로고
    • Detecting the geographical pattern of speciation from species-level phylogenies
    • Barraclough, T. G., and A. P. Vogler. 2000. Detecting the geographical pattern of speciation from species-level phylogenies. American Naturalist 155:419-434.
    • (2000) American Naturalist , vol.155 , pp. 419-434
    • Barraclough, T.G.1    Vogler, A.P.2
  • 6
    • 4544384717 scopus 로고
    • A new night lizard (Xantusia vigilis sierrae) from the southern Sierra Nevada in California
    • Bezy, R. L. 1967a. A new night lizard (Xantusia vigilis sierrae) from the southern Sierra Nevada in California. Journal of the Arizona Academy of Science 4:163-167.
    • (1967) Journal of the Arizona Academy of Science , vol.4 , pp. 163-167
    • Bezy, R.L.1
  • 7
    • 0000237326 scopus 로고
    • Variation, distribution, and taxonomic status of the Arizona night lizard (Xantusia arizonae)
    • _. 1967b. Variation, distribution, and taxonomic status of the Arizona night lizard (Xantusia arizonae). Copeia 3:653-661.
    • (1967) Copeia , vol.3 , pp. 653-661
  • 8
    • 0002503859 scopus 로고
    • Karyotypic variation and evolution of the lizards in the family Xantusiidae
    • Los Angeles
    • _. 1972. Karyotypic variation and evolution of the lizards in the family Xantusiidae. Contributions in Science (Los Angeles) 227:1-29.
    • (1972) Contributions in Science , vol.227 , pp. 1-29
  • 9
    • 4544289403 scopus 로고
    • Xantusia vigilis Baird desert night lizard
    • _. 1982. Xantusia vigilis Baird desert night lizard. Catalogue of American Amphibians and Reptiles 302: 1-4.
    • (1982) Catalogue of American Amphibians and Reptiles , vol.302 , pp. 1-4
  • 10
    • 4544251328 scopus 로고
    • The natural history of the night lizards, family Xantusiidae
    • Pages 1-12. H. F. DeLisle, P. R. Brown, B. Kaufman, and B. McGurty, eds. Proceedings of the Conference on California Herpetology
    • _. 1988. The natural history of the night lizards, family Xantusiidae. Pages 1-12 in H. F. DeLisle, P. R. Brown, B. Kaufman, and B. McGurty, eds. Proceedings of the Conference on California Herpetology. Southwestern Herpetological Society Special Publication 4:1-143.
    • (1988) Southwestern Herpetological Society Special Publication , vol.4 , pp. 1-143
  • 11
    • 4544371198 scopus 로고
    • Night lizards: The evolution of habitat specialists
    • _. 1989. Night lizards: the evolution of habitat specialists. Terra 28:29-34.
    • (1989) Terra , vol.28 , pp. 29-34
  • 12
    • 0032852696 scopus 로고    scopus 로고
    • A new species of Xantusia (Squamata: Xantusiidae) from Zacatecas, Mexico
    • Bezy, R. L., and O. Flores-Villela. 1999. A new species of Xantusia (Squamata: Xantusiidae) from Zacatecas, Mexico. Herpetologica 55:174-184.
    • (1999) Herpetologica , vol.55 , pp. 174-184
    • Bezy, R.L.1    Flores-Villela, O.2
  • 13
    • 0000588752 scopus 로고
    • A preliminary study of allozyme evolution in the lizard family Xantusiidae
    • Bezy, R. L., and J. W. Sites, Jr. 1987. A preliminary study of allozyme evolution in the lizard family Xantusiidae. Herpetologica 43:280-292.
    • (1987) Herpetologica , vol.43 , pp. 280-292
    • Bezy, R.L.1    Sites Jr., J.W.2
  • 14
    • 0028914815 scopus 로고
    • Biogeographic implications of cytochrome b sequences and allozymes in sockeye (Oncorhynchus nerka)
    • Bickham, J. W., C. C. Wood, and J. C. Patton. 1995. Biogeographic implications of cytochrome b sequences and allozymes in sockeye (Oncorhynchus nerka). Journal of Heredity 80:140-144.
    • (1995) Journal of Heredity , vol.80 , pp. 140-144
    • Bickham, J.W.1    Wood, C.C.2    Patton, J.C.3
  • 15
    • 0031936147 scopus 로고    scopus 로고
    • Some methodological issues in macroecology
    • Blackburn, T. M., and K. J. Gaston. 1998. Some methodological issues in macroecology. American Naturalist 151:68-83.
    • (1998) American Naturalist , vol.151 , pp. 68-83
    • Blackburn, T.M.1    Gaston, K.J.2
  • 16
    • 0035050334 scopus 로고    scopus 로고
    • Deep molecular divergence in the absence of morphological and ecological change in the Californian coastal dune endemic trapdoor spider Aptostichus simus
    • Bond, J. E., M. C. Hedin, M. G. Ramirez, and B. D. Opell. 2001. Deep molecular divergence in the absence of morphological and ecological change in the Californian coastal dune endemic trapdoor spider Aptostichus simus. Molecular Ecology 10:899-910.
    • (2001) Molecular Ecology , vol.10 , pp. 899-910
    • Bond, J.E.1    Hedin, M.C.2    Ramirez, M.G.3    Opell, B.D.4
  • 18
    • 0033771358 scopus 로고    scopus 로고
    • TCS: A computer program to estimate gene genealogies
    • Clement, M., D. Posada, and K. A. Crandall. 2000. TCS: a computer program to estimate gene genealogies. Molecular Ecology 9:1657-1660.
    • (2000) Molecular Ecology , vol.9 , pp. 1657-1660
    • Clement, M.1    Posada, D.2    Crandall, K.A.3
  • 19
    • 0002007544 scopus 로고
    • Viewpoint: A new taxonomic arrangement for some North American amphibians and reptiles
    • Collins, J. T. 1991. Viewpoint: a new taxonomic arrangement for some North American amphibians and reptiles. Herpetological Review 22:42-43.
    • (1991) Herpetological Review , vol.22 , pp. 42-43
    • Collins, J.T.1
  • 20
    • 0030844574 scopus 로고    scopus 로고
    • A critique of Sewall Wright's shifting balance theory of evolution
    • Coyne, J., N. H. Barton, and M. Turelli. 1997. A critique of Sewall Wright's shifting balance theory of evolution. Evolution 51:643-671.
    • (1997) Evolution , vol.51 , pp. 643-671
    • Coyne, J.1    Barton, N.H.2    Turelli, M.3
  • 21
    • 0030032992 scopus 로고    scopus 로고
    • Multiple interspecies transmissions of human and simian T-cell leukemia/lymphoma virus type I sequences
    • Crandall, K. A. 1996. Multiple interspecies transmissions of human and simian T-cell leukemia/lymphoma virus type I sequences. Molecular Biology and Evolution 13:115-131.
    • (1996) Molecular Biology and Evolution , vol.13 , pp. 115-131
    • Crandall, K.A.1
  • 22
    • 0002434154 scopus 로고
    • Intraspecific phylogenetics: Problems and solutions
    • R. W. Scotland, D. J. Siebert, and D. M. Williams, eds. Clarendon, Oxford
    • Crandall, K. A., A. R. Templeton, and C. F. Sing. 1994. Intraspecific phylogenetics: problems and solutions. Pages 273-297 in R. W. Scotland, D. J. Siebert, and D. M. Williams, eds. Models of phylogeny reconstruction. Clarendon, Oxford.
    • (1994) Models of Phylogeny Reconstruction , pp. 273-297
    • Crandall, K.A.1    Templeton, A.R.2    Sing, C.F.3
  • 23
    • 0029741685 scopus 로고    scopus 로고
    • Phylogenetics, molecular variation, and species concepts
    • Davis, J. I. 1996. Phylogenetics, molecular variation, and species concepts. BioScience 46:502-511.
    • (1996) BioScience , vol.46 , pp. 502-511
    • Davis, J.I.1
  • 24
    • 0002788119 scopus 로고    scopus 로고
    • The general lineage concept of species, species criteria, and the process of speciation
    • D. J. Howard and S. H. Berlocher, eds. Oxford University Press, Oxford
    • de Queiroz, K. 1998. The general lineage concept of species, species criteria, and the process of speciation. Pages 57-75 in D. J. Howard and S. H. Berlocher, eds. Endless forms: species and speciation. Oxford University Press, Oxford.
    • (1998) Endless Forms: Species and Speciation , pp. 57-75
    • De Queiroz, K.1
  • 25
    • 0035576346 scopus 로고    scopus 로고
    • Revealing the demographic histories of species using DNA sequences
    • Emerson, B., C. E. Paradis, and C. Thebaud. 2001. Revealing the demographic histories of species using DNA sequences. Trends in Ecology & Evolution 16:707-716.
    • (2001) Trends in Ecology & Evolution , vol.16 , pp. 707-716
    • Emerson, B.1    Paradis, C.E.2    Thebaud, C.3
  • 27
    • 4544326825 scopus 로고
    • Xantusia vigilis and its habitat in Sonora, Mexico
    • Felger, R. S. 1965. Xantusia vigilis and its habitat in Sonora, Mexico. Herpetologica 21:146-147.
    • (1965) Herpetologica , vol.21 , pp. 146-147
    • Felger, R.S.1
  • 28
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 29
    • 0030821992 scopus 로고    scopus 로고
    • Statistical test of neutrality of mutations against population growth, hitchhiking, and background selection
    • Fu, Y.-X. 1997. Statistical test of neutrality of mutations against population growth, hitchhiking, and background selection. Genetics 147:915-925.
    • (1997) Genetics , vol.147 , pp. 915-925
    • Fu, Y.-X.1
  • 30
    • 4544333277 scopus 로고
    • Lizards of the Sierra de la Laguna, Baja California Sur, Mexico
    • L. F. DeBano, P. F. Ffolliott, A. Ortega-Rubio, G. J. Gottfried, R. H. Hamre, and C. B. Edminster, eds. Biodiversity and management of the Madrean Archipelago: the sky islands of southwestern United States and Northwestern Mexico
    • Galina-Tessaro, P., S. Alvarez-Cardenas, A. Ortego-Rubio, and A. Gonzalez-Romero. 1995. Lizards of the Sierra de La Laguna, Baja California Sur, Mexico. Pages 638-642 in L. F. DeBano, P. F. Ffolliott, A. Ortega-Rubio, G. J. Gottfried, R. H. Hamre, and C. B. Edminster, eds. Biodiversity and management of the Madrean Archipelago: the sky islands of southwestern United States and Northwestern Mexico. USDA Forest Service General Technical Report RM-GTR-264.
    • (1995) USDA Forest Service General Technical Report RM-GTR-264 , pp. 638-642
    • Galina-Tessaro, P.1    Alvarez-Cardenas, S.2    Ortego-Rubio, A.3    Gonzalez-Romero, A.4
  • 31
    • 0002298602 scopus 로고
    • The geology and ages of the islands
    • T. J. Case and M. L. Cody, eds. University of California Press, Berkeley
    • Gastil, R. G., J. C. Minch, and R. P. Philips. 1983. The geology and ages of the islands. Pages 13-25 in T. J. Case and M. L. Cody, eds. Island biogeography and the Sea of Cortéz. University of California Press, Berkeley.
    • (1983) Island Biogeography and the Sea of Cortéz , pp. 13-25
    • Gastil, R.G.1    Minch, J.C.2    Philips, R.P.3
  • 33
    • 0034351387 scopus 로고    scopus 로고
    • Likelihood-based tests of topologies in phylogenetics
    • Goldman, N., J. P. Anderson, and A. G. Rodrigo. 2000. Likelihood-based tests of topologies in phylogenetics. Systematic Zoology 49:652-670.
    • (2000) Systematic Zoology , vol.49 , pp. 652-670
    • Goldman, N.1    Anderson, J.P.2    Rodrigo, A.G.3
  • 34
    • 0002033257 scopus 로고
    • The origin and evolution of the peninsula herpetofauna of Baja California, Mexico
    • Grismer, L. L. 1994. The origin and evolution of the peninsula herpetofauna of Baja California, Mexico. Herpetological Natural History 2:51-106.
    • (1994) Herpetological Natural History , vol.2 , pp. 51-106
    • Grismer, L.L.1
  • 35
    • 0036217536 scopus 로고    scopus 로고
    • A re-evaluation of the evidence for a mid-Pleistocene mid-peninsular seaway in Baja California: A reply to Riddle et al
    • _. 2002. A re-evaluation of the evidence for a mid-Pleistocene mid-peninsular seaway in Baja California: a reply to Riddle et al. Herpetological Review 33:15-16.
    • (2002) Herpetological Review , vol.33 , pp. 15-16
  • 36
    • 0030429790 scopus 로고    scopus 로고
    • Taxonomy and biogeography of the Sceloporus magister complex (Squamata: Phrynosomatidae) in Baja California
    • Grismer, L. L., and J. A. McGuire. 1996. Taxonomy and biogeography of the Sceloporus magister complex (Squamata: Phrynosomatidae) in Baja California. Herpetologica 52:416-427.
    • (1996) Herpetologica , vol.52 , pp. 416-427
    • Grismer, L.L.1    McGuire, J.A.2
  • 37
    • 0008863602 scopus 로고
    • A report on the herpetofauna of the Vizcaino Peninsula, Baja California, Mexico, with a discussion of its biogeographic and taxonomic implications
    • Grismer, L. L., J. A. McGuire, and B. D. Hollingsworth. 1994. A report on the herpetofauna of the Vizcaino Peninsula, Baja California, Mexico, with a discussion of its biogeographic and taxonomic implications. Bulletin Southern California Academy of Sciences 93:45-80.
    • (1994) Bulletin Southern California Academy of Sciences , vol.93 , pp. 45-80
    • Grismer, L.L.1    McGuire, J.A.2    Hollingsworth, B.D.3
  • 38
    • 0002165931 scopus 로고    scopus 로고
    • Biogeography of Baja California peninsular desert mammals
    • T. L. Yates, W. L. Gannon, and D. E. Wilson, eds. University of New Mexico, Alberquerque
    • Hafner, D. J., and B. R. Riddle. 1997. Biogeography of Baja California peninsular desert mammals. Pages 39-68 in T. L. Yates, W. L. Gannon, and D. E. Wilson, eds. Life among the muses: papers in honor of James S. Findley. University of New Mexico, Alberquerque.
    • (1997) Life among the Muses: Papers in Honor of James S. Findley , pp. 39-68
    • Hafner, D.J.1    Riddle, B.R.2
  • 39
    • 0035576285 scopus 로고    scopus 로고
    • Prospects for nuclear gene phylogeography
    • Hare, M. P. 2001. Prospects for nuclear gene phylogeography. Trends in Ecology & Evolution 16:546-557.
    • (2001) Trends in Ecology & Evolution , vol.16 , pp. 546-557
    • Hare, M.P.1
  • 40
    • 0002821517 scopus 로고    scopus 로고
    • Linking evolutionary pattern and process: The relevance of species concepts for the study of speciation
    • D. J. Howard and S. L. Berlocher, eds. Oxford University Press, New York
    • Harrison, R. G. 1998. Linking evolutionary pattern and process: the relevance of species concepts for the study of speciation. Pages 19-31 in D. J. Howard and S. L. Berlocher, eds. Endless forms: species and speciation. Oxford University Press, New York.
    • (1998) Endless Forms: Species and Speciation , pp. 19-31
    • Harrison, R.G.1
  • 41
    • 0027565034 scopus 로고
    • Phylogeny of Xanthusiid lizards: Concern for data and analysis
    • Hedges, S. B., and R. L. Bezy. 1993. Phylogeny of Xanthusiid lizards: concern for data and analysis. Molecular Phylogenetics and Evolution 2:76-87.
    • (1993) Molecular Phylogenetics and Evolution , vol.2 , pp. 76-87
    • Hedges, S.B.1    Bezy, R.L.2
  • 42
    • 0025942611 scopus 로고
    • Phylogenetic relationships and biogeography of Xantusiid lizards, inferred from mitochondrial DNA sequences
    • Hedges, S. B., R. L. Bezy, and L. R. Maxson. 1991. Phylogenetic relationships and biogeography of Xantusiid lizards, inferred from mitochondrial DNA sequences. Molecular Biology and Evolution 8:767-780.
    • (1991) Molecular Biology and Evolution , vol.8 , pp. 767-780
    • Hedges, S.B.1    Bezy, R.L.2    Maxson, L.R.3
  • 43
    • 0031405714 scopus 로고    scopus 로고
    • Speciational history in a diverse clade of habitat-specialized spiders (Araneae: Nesticidae: Nesticus): Inferences from geographic-based sampling
    • Hedin, M. 1997. Speciational history in a diverse clade of habitat-specialized spiders (Araneae: Nesticidae: Nesticus): inferences from geographic-based sampling. Evolution 51:1929-1945.
    • (1997) Evolution , vol.51 , pp. 1929-1945
    • Hedin, M.1
  • 44
    • 0036792597 scopus 로고    scopus 로고
    • Genealogical exclusivity in geographically proximate populations of Hypochilus thorelli Marx (Aranae, Hypochilidae) on the Cumberland Plateau of North America
    • Hedin, M., and D. A. Wood. 2002. Genealogical exclusivity in geographically proximate populations of Hypochilus thorelli Marx (Aranae, Hypochilidae) on the Cumberland Plateau of North America. Molecular Ecology 11:1975-1988.
    • (2002) Molecular Ecology , vol.11 , pp. 1975-1988
    • Hedin, M.1    Wood, D.A.2
  • 45
    • 0032965634 scopus 로고    scopus 로고
    • Perspective: Highly variable loci and their interpretation in evolution and conservation
    • Hedrick, P. W. 1999. Perspective: highly variable loci and their interpretation in evolution and conservation. Evolution 53:313-318.
    • (1999) Evolution , vol.53 , pp. 313-318
    • Hedrick, P.W.1
  • 46
    • 0000272378 scopus 로고    scopus 로고
    • Detecting cryptic species using allozyme data
    • R. C. Bruce, R. G. Jaeger, and L. D. Houck, eds. Kluwer Academic/Plenum, New York
    • Highton, R. 2000. Detecting cryptic species using allozyme data. Pages 215-241 in R. C. Bruce, R. G. Jaeger, and L. D. Houck, eds. The biology of plethodontid salamaders. Kluwer Academic/Plenum, New York.
    • (2000) The Biology of Plethodontid Salamaders , pp. 215-241
    • Highton, R.1
  • 47
    • 12044253190 scopus 로고
    • An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis
    • Hillis, D. M., and J. J. Bull. 1993. An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis. Systematic Biology 42:182-192.
    • (1993) Systematic Biology , vol.42 , pp. 182-192
    • Hillis, D.M.1    Bull, J.J.2
  • 48
    • 0035527347 scopus 로고    scopus 로고
    • Empirical and hierarchical Bayesian estimation of ancestral states
    • Huelsenbeck, J. P., and J. P. Bollback. 2001. Empirical and hierarchical Bayesian estimation of ancestral states. Systematic Biology 50:351-366.
    • (2001) Systematic Biology , vol.50 , pp. 351-366
    • Huelsenbeck, J.P.1    Bollback, J.P.2
  • 49
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogenetic trees
    • Huelsenbeck, J. P., and F. Ronquist. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17:754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 50
    • 0030700253 scopus 로고    scopus 로고
    • Population diversity: Its extent and extinction
    • Hughes, J. B., G. C. Daily, and P. R. Ehrlich. 1997. Population diversity: its extent and extinction. Science 278: 689-692.
    • (1997) Science , vol.278 , pp. 689-692
    • Hughes, J.B.1    Daily, G.C.2    Ehrlich, P.R.3
  • 52
    • 85047679528 scopus 로고    scopus 로고
    • Spatial patterns of genetic variation generated by different forms of dispersal during range expansion
    • Ibrahim, K., R. A. Nichols, and G. M. Hewitt. 1996. Spatial patterns of genetic variation generated by different forms of dispersal during range expansion. Heredity 77: 282-291.
    • (1996) Heredity , vol.77 , pp. 282-291
    • Ibrahim, K.1    Nichols, R.A.2    Hewitt, G.M.3
  • 53
    • 0036959114 scopus 로고    scopus 로고
    • Phylogeographic breaks without geographic barriers to gene flow
    • Irwin, D. E. 2002. Phylogeographic breaks without geographic barriers to gene flow. Evolution 56:2383-2394.
    • (2002) Evolution , vol.56 , pp. 2383-2394
    • Irwin, D.E.1
  • 57
    • 0036005516 scopus 로고    scopus 로고
    • Molecular systematics of the eastern fence lizard (Sceloporus undulatus): A comparison of parsimony, likelihood, and Bayesian approaches
    • Leaché, A. D., and T. W. Reeder. 2002. Molecular systematics of the eastern fence lizard (Sceloporus undulatus): a comparison of parsimony, likelihood, and Bayesian approaches. Systematic Biology 51:44-68.
    • (2002) Systematic Biology , vol.51 , pp. 44-68
    • Leaché, A.D.1    Reeder, T.W.2
  • 58
    • 0038364009 scopus 로고    scopus 로고
    • Phylogenetic comparative methods and the geography of speciation
    • Losos, J. B., and R. E. Glor. 2003. Phylogenetic comparative methods and the geography of speciation. Trends in Ecology & Evolution 18:220-227.
    • (2003) Trends in Ecology & Evolution , vol.18 , pp. 220-227
    • Losos, J.B.1    Glor, R.E.2
  • 59
    • 0035659401 scopus 로고    scopus 로고
    • Phylogeography of the night lizard, Xantusia henshawi, in southern California: Evolution across fault zones
    • Lovich, R. 2001. Phylogeography of the night lizard, Xantusia henshawi, in southern California: evolution across fault zones. Herpetologica 57:470-487.
    • (2001) Herpetologica , vol.57 , pp. 470-487
    • Lovich, R.1
  • 61
    • 0031504952 scopus 로고    scopus 로고
    • Gene trees in species trees
    • Maddison, W. P. 1997. Gene trees in species trees. Systematic Biology 46:523-536.
    • (1997) Systematic Biology , vol.46 , pp. 523-536
    • Maddison, W.P.1
  • 62
    • 0038460135 scopus 로고    scopus 로고
    • Population genetic structure of the toad Bufo woodhousii: An empirical assessment of the effects of haplotype extinction on nested cladistic analysis
    • Masta, S. E., N. M. Laurent, and E. J. Routman. 2003. Population genetic structure of the toad Bufo woodhousii: an empirical assessment of the effects of haplotype extinction on nested cladistic analysis. Molecular Ecology 12:1541-1554.
    • (2003) Molecular Ecology , vol.12 , pp. 1541-1554
    • Masta, S.E.1    Laurent, N.M.2    Routman, E.J.3
  • 63
    • 0000216233 scopus 로고    scopus 로고
    • A hierarchy of species concepts: The denouement in the saga of the species problem
    • M. F. Claridge, H. A. Dawah, and M. R. Wilson, eds. Chapman & Hall, London
    • Mayden, R. L. 1997. A hierarchy of species concepts: the denouement in the saga of the species problem. Pages 381-424 in M. F. Claridge, H. A. Dawah, and M. R. Wilson, eds. Species: the units of biodiversity. Chapman & Hall, London.
    • (1997) Species: The Units of Biodiversity , pp. 381-424
    • Mayden, R.L.1
  • 64
    • 0038632326 scopus 로고    scopus 로고
    • Sampling strategies for delimiting species: Genes, individuals, and population in the Liolaemus elongatus-kreigi complex (Squamata: Liolaemidae) in Andean-Patagonian South America
    • Morando, M., L. J. Avila, and J. W. Sites, Jr. 2003. Sampling strategies for delimiting species: genes, individuals, and population in the Liolaemus elongatus-kreigi complex (Squamata: Liolaemidae) in Andean-Patagonian South America. Systematic Biology 52:159-185.
    • (2003) Systematic Biology , vol.52 , pp. 159-185
    • Morando, M.1    Avila, L.J.2    Sites Jr., J.W.3
  • 65
    • 0002973056 scopus 로고
    • Paleobiogeography and patterns of genetic differentiation of the Baja California herpetofauna
    • Murphy, R. W. 1983a. Paleobiogeography and patterns of genetic differentiation of the Baja California herpetofauna. Occasional Papers of the California Academy of Science 137:1-48.
    • (1983) Occasional Papers of the California Academy of Science , vol.137 , pp. 1-48
    • Murphy, R.W.1
  • 66
    • 0002456637 scopus 로고
    • The reptiles: Origins and evolution
    • T. J. Case and M. L. Cody, eds. University of California Press, Berkeley
    • _. 1983b. The reptiles: origins and evolution. Pages 130-158 in T. J. Case and M. L. Cody, eds. Island biogeography on the Sea of Cortéz. University of California Press, Berkeley.
    • (1983) Island Biogeography on the Sea of Cortéz , pp. 130-158
  • 67
    • 0001872764 scopus 로고    scopus 로고
    • Proteins: Isozyme electrophoresis
    • D. M. Hillis, C. Moritz, and B. K. Mable, eds. Sinauer, Sunderland, Mass.
    • Murphy, R. W., J. W. Sites, Jr., D. G. Buth, and C. H. Haufler. 1996. Proteins: isozyme electrophoresis. Pages 51-120 in D. M. Hillis, C. Moritz, and B. K. Mable, eds. Molecular systematics. Sinauer, Sunderland, Mass.
    • (1996) Molecular Systematics , pp. 51-120
    • Murphy, R.W.1    Sites Jr., J.W.2    Buth, D.G.3    Haufler, C.H.4
  • 68
    • 0028042678 scopus 로고
    • The genetic consequences of long distance dispersal during colonization
    • Nichols, R. A., and G. M. Hewitt. 1994. The genetic consequences of long distance dispersal during colonization. Heredity 72:312-317.
    • (1994) Heredity , vol.72 , pp. 312-317
    • Nichols, R.A.1    Hewitt, G.M.2
  • 69
    • 0000913208 scopus 로고    scopus 로고
    • Coalescent theory
    • D. Balding, M. Bishop, and C. Cannings, eds. Wiley, Chichester
    • Nordborg, M. 2001. Coalescent theory. Pages 1-37 in D. Balding, M. Bishop, and C. Cannings, eds. Handbook of statistical genetics. Wiley, Chichester.
    • (2001) Handbook of Statistical Genetics , pp. 1-37
    • Nordborg, M.1
  • 70
    • 0033531910 scopus 로고    scopus 로고
    • Phylogeography of a wide-ranging desert lizard, Gambelia wislizenii (Crotaphytidae)
    • Orange, D. I., B. R. Riddle, and D. C. Nickle. 1999. Phylogeography of a wide-ranging desert lizard, Gambelia wislizenii (Crotaphytidae). Copeia 2:267-273.
    • (1999) Copeia , vol.2 , pp. 267-273
    • Orange, D.I.1    Riddle, B.R.2    Nickle, D.C.3
  • 71
    • 84963067354 scopus 로고
    • An analysis of the recent land mammals
    • Orr, R. T. 1960. An analysis of the recent land mammals. Systematic Zoology 9:171-179.
    • (1960) Systematic Zoology , vol.9 , pp. 171-179
    • Orr, R.T.1
  • 72
    • 0032733393 scopus 로고    scopus 로고
    • Using genetics to identify intraspecific conservation units: A critique of current methods
    • Paetkau, D. 1999. Using genetics to identify intraspecific conservation units: a critique of current methods. Conservation Biology 13:1507-1509.
    • (1999) Conservation Biology , vol.13 , pp. 1507-1509
    • Paetkau, D.1
  • 73
    • 0013468508 scopus 로고    scopus 로고
    • A new lizard species on the genus Xantusia from Arizona
    • Natural History Museum, University of Kansas
    • Papenfuss, T. J., J. R. Macy, and J. A. Schulte. 2001. A new lizard species on the genus Xantusia from Arizona. Scientific Papers, Natural History Museum, University of Kansas 23:1-9.
    • (2001) Scientific Papers , vol.23 , pp. 1-9
    • Papenfuss, T.J.1    Macy, J.R.2    Schulte, J.A.3
  • 74
    • 12044256661 scopus 로고
    • Paraphyly, polyphyly, and the nature of species boundaries in pocket gophers (genus Thomomys)
    • Patton, J. L., and M. F. Smith. 1994. Paraphyly, polyphyly, and the nature of species boundaries in pocket gophers (genus Thomomys). Systematic Biology 43:11-26.
    • (1994) Systematic Biology , vol.43 , pp. 11-26
    • Patton, J.L.1    Smith, M.F.2
  • 75
    • 0344026215 scopus 로고    scopus 로고
    • Alternate species concepts as bases for determining priority conservation areas
    • Peterson, A. T., and A. G. Navarro-Sigüenza. 1999. Alternate species concepts as bases for determining priority conservation areas. Conservation Biology 13:427-431.
    • (1999) Conservation Biology , vol.13 , pp. 427-431
    • Peterson, A.T.1    Navarro-Sigüenza, A.G.2
  • 76
    • 0036263279 scopus 로고    scopus 로고
    • Optimal randomization strategies when testing the existence of a phylogeographic structure
    • Petit, R. J., and D. Grivet. 2002. Optimal randomization strategies when testing the existence of a phylogeographic structure. Genetics 161:469-471.
    • (2002) Genetics , vol.161 , pp. 469-471
    • Petit, R.J.1    Grivet, D.2
  • 78
    • 0031773680 scopus 로고    scopus 로고
    • Modeltest: Testing the model of DNA substitution
    • Posada, D., and K. A. Crandall. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics 14:817-818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 79
    • 0035139147 scopus 로고    scopus 로고
    • Intraspecific gene genealogies: Trees grafting onto networks
    • _. 2001. Intraspecific gene genealogies: trees grafting onto networks. Trends in Ecology & Evolution 16:37-47.
    • (2001) Trends in Ecology & Evolution , vol.16 , pp. 37-47
  • 80
    • 0034100234 scopus 로고    scopus 로고
    • GeoDis: Software for the cladistic nested analysis of the geographical distribution of genetic haplotypes
    • Posada, D., K. A. Crandall, and A. R. Templeton. 2000. GeoDis: software for the cladistic nested analysis of the geographical distribution of genetic haplotypes. Molecular Ecology 9:487-488.
    • (2000) Molecular Ecology , vol.9 , pp. 487-488
    • Posada, D.1    Crandall, K.A.2    Templeton, A.R.3
  • 81
    • 0034885617 scopus 로고    scopus 로고
    • Combining mitochondrial DMA sequences and morphological data to infer species boundaries: Phylogeography of lanceheaded pitvipers in the Brazilian Atlantic forest, and the status of Bothrops pradoi (squamata: Serpentes: Viperidae)
    • Puorto, G., M. Da Graca Salomao, R. D. G. Theakston, R. S. Thorpe, D. A. Warrell, and W. Wüster. 2001. Combining mitochondrial DMA sequences and morphological data to infer species boundaries: phylogeography of lanceheaded pitvipers in the Brazilian Atlantic forest, and the status of Bothrops pradoi (squamata: Serpentes: Viperidae). Journal of Evolutionary Biology 14:527-538.
    • (2001) Journal of Evolutionary Biology , vol.14 , pp. 527-538
    • Puorto, G.1    Da Graca Salomao, M.2    Theakston, R.D.G.3    Thorpe, R.S.4    Warrell, D.A.5    Wüster, W.6
  • 82
    • 0033694173 scopus 로고    scopus 로고
    • Comparative phylogeography of Bailey's pocket mouse (Chaetodipus baileyi) and the Peromyscus eremicus species group: Historical vicariance of the Baja California peninsula desert
    • Riddle, B. R., D. J. Hafner, and L. F. Alexander. 2000a. Comparative phylogeography of Bailey's pocket mouse (Chaetodipus baileyi) and the Peromyscus eremicus species group: historical vicariance of the Baja California peninsula desert. Molecular Phylogenetics and Evolution 17:161-172.
    • (2000) Molecular Phylogenetics and Evolution , vol.17 , pp. 161-172
    • Riddle, B.R.1    Hafner, D.J.2    Alexander, L.F.3
  • 84
    • 0033678106 scopus 로고    scopus 로고
    • Phylogeography and systematics of the Peromyscus eremicus species group and the historical biogeography of North American warm regional deserts
    • Riddle, B. R., D. J. Hafner, and L. F. Alexander. 2000c. Phylogeography and systematics of the Peromyscus eremicus species group and the historical biogeography of North American warm regional deserts. Molecular Phylogenetics and Evolution 17:145-160.
    • (2000) Molecular Phylogenetics and Evolution , vol.17 , pp. 145-160
    • Riddle, B.R.1    Hafner, D.J.2    Alexander, L.F.3
  • 86
    • 0343081505 scopus 로고    scopus 로고
    • Molecular systematics of the New World gopher, bull, and pinesnakes (Pituophis: Colubridae), a transcontinental species complex
    • Rodríguez-Robles, J. A., and J. M. De Jesús-Escobar. 2000. Molecular systematics of the New World gopher, bull, and pinesnakes (Pituophis: Colubridae), a transcontinental species complex. Molecular Phylogenetics and Evolution 14:35-50.
    • (2000) Molecular Phylogenetics and Evolution , vol.14 , pp. 35-50
    • Rodríguez-Robles, J.A.1    De Jesús-Escobar, J.M.2
  • 88
    • 0002643273 scopus 로고
    • Studies on the lizard family Xantusiidae. III. A new genus for Xantusia riversiana Cope, 1883
    • New York
    • Savage, J. M. 1957. Studies on the lizard family Xantusiidae. III. A new genus for Xantusia riversiana Cope, 1883. Zoologica (New York) 42:83-86.
    • (1957) Zoologica , vol.42 , pp. 83-86
    • Savage, J.M.1
  • 89
    • 84963049044 scopus 로고
    • Evolution of a peninsular herpetofauna
    • _. 1960. Evolution of a peninsular herpetofauna. Systematic Zoology 9:184-212.
    • (1960) Systematic Zoology , vol.9 , pp. 184-212
  • 91
    • 0037058998 scopus 로고    scopus 로고
    • Conflict between nuclear and mitochondrial DNA phylogenies of a recent species radiation: What mtDNA reveals and conceals about modes of speciation in Hawaiian crickets
    • Shaw, K. L. 2002. Conflict between nuclear and mitochondrial DNA phylogenies of a recent species radiation: what mtDNA reveals and conceals about modes of speciation in Hawaiian crickets. Proceedings of the National Academy of Sciences of the USA 99:16122-16127.
    • (2002) Proceedings of the National Academy of Sciences of the USA , vol.99 , pp. 16122-16127
    • Shaw, K.L.1
  • 92
    • 0032766857 scopus 로고    scopus 로고
    • Multiple comparisons of log-likelihoods with applications to phylogenetic inference
    • Shimodaira, H., and M. Hawegawa. 1999. Multiple comparisons of log-likelihoods with applications to phylogenetic inference. Molecular Biology and Evolution 16:1114-1116.
    • (1999) Molecular Biology and Evolution , vol.16 , pp. 1114-1116
    • Shimodaira, H.1    Hawegawa, M.2
  • 93
    • 0031445235 scopus 로고    scopus 로고
    • Testing species boundaries in biodiversity studies
    • Sites, J. W., Jr., and K. A. Crandall. 1997. Testing species boundaries in biodiversity studies. Conservation Biology 11:1289-1297.
    • (1997) Conservation Biology , vol.11 , pp. 1289-1297
    • Sites Jr., J.W.1    Crandall, K.A.2
  • 94
    • 0042011260 scopus 로고    scopus 로고
    • Delimiting species: A renaissance issue in systematic biology
    • Sites, J. W., Jr., and J. C. Marshall. 2003. Delimiting species: a renaissance issue in systematic biology. Trends in Ecology & Evolution 18:462-470.
    • (2003) Trends in Ecology & Evolution , vol.18 , pp. 462-470
    • Sites Jr., J.W.1    Marshall, J.C.2
  • 95
    • 0024341852 scopus 로고
    • A cladistic measure of gene flow inferred from the phylogenies of alleles
    • Slatkin, M., and W. P. Maddison. 1989. A cladistic measure of gene flow inferred from the phylogenies of alleles. Genetics 123:603-613.
    • (1989) Genetics , vol.123 , pp. 603-613
    • Slatkin, M.1    Maddison, W.P.2
  • 96
    • 0004248459 scopus 로고    scopus 로고
    • Phylogenetic analysis using parsimony. Sinauer, Sunderland, Mass.
    • Swofford, D. L. 2002. PAUP* 4.0b10. Phylogenetic analysis using parsimony. Sinauer, Sunderland, Mass.
    • (2002) PAUP* 4.0b10
    • Swofford, D.L.1
  • 97
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
    • Tajima, F. 1989. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123:585-595.
    • (1989) Genetics , vol.123 , pp. 585-595
    • Tajima, F.1
  • 98
    • 0002983450 scopus 로고
    • The meaning of species and speciation
    • D. Otte and J. A. Endler, eds. Sinauer, Sunderland, Mass.
    • Templeton, A. R. 1989. The meaning of species and speciation. Pages 3-27 in D. Otte and J. A. Endler, eds. Speciation and its consequences. Sinauer, Sunderland, Mass.
    • (1989) Speciation and Its Consequences , pp. 3-27
    • Templeton, A.R.1
  • 99
    • 0032055149 scopus 로고    scopus 로고
    • Nested clade analyses of phylogeographic data: Testing hypotheses about gene flow and population history
    • _. 1998. Nested clade analyses of phylogeographic data: testing hypotheses about gene flow and population history. Molecular Ecology 7:381-397.
    • (1998) Molecular Ecology , vol.7 , pp. 381-397
  • 100
    • 0035047252 scopus 로고    scopus 로고
    • Using phylogeographic analyses of gene trees to test species status and processes
    • _. 2001. Using phylogeographic analyses of gene trees to test species status and processes. Molecular Ecology 10:779-791.
    • (2001) Molecular Ecology , vol.10 , pp. 779-791
  • 101
    • 0027278852 scopus 로고
    • A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping. IV. Nested analyses with cladogram uncertainty and recombination
    • Templeton, A. R., and C. F. Sing. 1993. A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping. IV. Nested analyses with cladogram uncertainty and recombination. Genetics 134:659-669.
    • (1993) Genetics , vol.134 , pp. 659-669
    • Templeton, A.R.1    Sing, C.F.2
  • 102
    • 0026662698 scopus 로고
    • A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation
    • Templeton, A. R., K. A. Crandall, and C. F. Sing. 1992. A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation. Genetics 132:619-633.
    • (1992) Genetics , vol.132 , pp. 619-633
    • Templeton, A.R.1    Crandall, K.A.2    Sing, C.F.3
  • 103
    • 0029058158 scopus 로고
    • Separating population structure from population history: A cladistic analysis of the geographical distribution of mitochondrial DNA haplotypes in the tiger salamander, Ambystoma tigrinum
    • Templeton, A. R., E. Routman, and C. A. Phillips. 1995. Separating population structure from population history: a cladistic analysis of the geographical distribution of mitochondrial DNA haplotypes in the tiger salamander, Ambystoma tigrinum. Genetics 140:767-782.
    • (1995) Genetics , vol.140 , pp. 767-782
    • Templeton, A.R.1    Routman, E.2    Phillips, C.A.3
  • 104
    • 0031574072 scopus 로고    scopus 로고
    • The ClustalX windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., T. J. Gibson, F. Plewniak, F. Jeanmougin, and D. G. Higgins. 1997. The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research 24:4876-4882.
    • (1997) Nucleic Acids Research , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 106
    • 0031204055 scopus 로고    scopus 로고
    • Phylogeny of the side-blotched lizards (Phrynosomatidae: Uta) based on mtDNA sequences: Support for a midpeninsular seaway in Baja California
    • Upton, D. E., and R. W. Murphy. 1997. Phylogeny of the side-blotched lizards (Phrynosomatidae: Uta) based on mtDNA sequences: support for a midpeninsular seaway in Baja California. Molecular Phylogenetics and Evolution 8:104-113.
    • (1997) Molecular Phylogenetics and Evolution , vol.8 , pp. 104-113
    • Upton, D.E.1    Murphy, R.W.2
  • 107
    • 0025524248 scopus 로고
    • Late Quaternary vegetation and climate of the Sonoran Desert, United States and Mexico
    • J. L. Betancourt, T. R. Van Devender, and P. S. Martin, eds. University of Arizona Press, Tucson
    • Van Devender, T. R. 1990. Late Quaternary vegetation and climate of the Sonoran Desert, United States and Mexico. Pages 134-163 in J. L. Betancourt, T. R. Van Devender, and P. S. Martin, eds. Packrat middens: the last 40,000 years of biotic change. University of Arizona Press, Tucson.
    • (1990) Packrat Middens: The Last 40,000 Years of Biotic Change , pp. 134-163
    • Van Devender, T.R.1
  • 108
    • 0037332226 scopus 로고    scopus 로고
    • Xantusiid "night" lizards: A puzzling phylogenetic problem revisited using likelihood-based Bayesian methods on mtDNA sequences
    • Vicario, S., A. Caccone, and J. Gauthier. 2003. Xantusiid "night" lizards: a puzzling phylogenetic problem revisited using likelihood-based Bayesian methods on mtDNA sequences. Molecular Phylogenetics and Evolution 26:243-261.
    • (2003) Molecular Phylogenetics and Evolution , vol.26 , pp. 243-261
    • Vicario, S.1    Caccone, A.2    Gauthier, J.3
  • 109
    • 0002490938 scopus 로고    scopus 로고
    • Detecting species borders using diverse data sets: Examples from Plethodontid salamanders in California
    • R. C. Bruce, R. G. Jaeger, and L. D. Houck, eds. Kluwer Academic/Plenum, New York
    • Wake, D. B., and E. L. Jockusch 2000. Detecting species borders using diverse data sets: examples from Plethodontid salamanders in California. Pages 95-119 in R. C. Bruce, R. G. Jaeger, and L. D. Houck, eds. The biology of plethodontid salamaders. Kluwer Academic/Plenum, New York.
    • (2000) The Biology of Plethodontid Salamaders , pp. 95-119
    • Wake, D.B.1    Jockusch, E.L.2
  • 110
    • 0013502198 scopus 로고
    • Another new night lizard (Xantusia) from Durango, Mexico
    • Los Angeles
    • Webb, R. G. 1970. Another new night lizard (Xantusia) from Durango, Mexico. Contributions in Science (Los Angeles) 194:1-10.
    • (1970) Contributions in Science , vol.194 , pp. 1-10
    • Webb, R.G.1
  • 111
    • 0032226105 scopus 로고    scopus 로고
    • Combining data sets with different phylogenetic histories
    • Wiens, J. J. 1998. Combining data sets with different phylogenetic histories. Systematic Biology 47:568-581.
    • (1998) Systematic Biology , vol.47 , pp. 568-581
    • Wiens, J.J.1
  • 112
    • 0033382149 scopus 로고    scopus 로고
    • Polymorphism in systematics and comparative biology
    • _. 1999. Polymorphism in systematics and comparative biology. Annual Review of Ecology and Systematics 30:327-362.
    • (1999) Annual Review of Ecology and Systematics , vol.30 , pp. 327-362
  • 113
    • 0035527365 scopus 로고    scopus 로고
    • Character analysis in morphological phylogenetics: Problems and solutions
    • _. 2001. Character analysis in morphological phylogenetics: problems and solutions. Systematic Biology 50:688-699.
    • (2001) Systematic Biology , vol.50 , pp. 688-699
  • 114
    • 0036005519 scopus 로고    scopus 로고
    • Delimiting species using DNA and morphological variation and discordant species limits in spiny lizards (Sceloporous)
    • Wiens, J. J., and T. A. Penkrot. 2002. Delimiting species using DNA and morphological variation and discordant species limits in spiny lizards (Sceloporous). Systematic Biology 51:69-91.
    • (2002) Systematic Biology , vol.51 , pp. 69-91
    • Wiens, J.J.1    Penkrot, T.A.2
  • 115
    • 0031153860 scopus 로고    scopus 로고
    • Molecular systematics of short-horned lizards: Biogeography and taxonomy of a widespread species complex
    • Zamudio, K. R., K. B. Jones, and R. H. Ward. 1997. Molecular systematics of short-horned lizards: biogeography and taxonomy of a widespread species complex. Systematic Biology 46:285-305.
    • (1997) Systematic Biology , vol.46 , pp. 285-305
    • Zamudio, K.R.1    Jones, K.B.2    Ward, R.H.3
  • 116
    • 0002135357 scopus 로고
    • The ecology of a population of Xantusia vigilis, the desert night lizard
    • Zweifel, R. G., and C. H. Lowe. 1966. The ecology of a population of Xantusia vigilis, the desert night lizard. American Museum Novitates 2247:1-57.
    • (1966) American Museum Novitates , vol.2247 , pp. 1-57
    • Zweifel, R.G.1    Lowe, C.H.2


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