Sparsely cross-linked "nanogel" matrixes as fluid, mechanically stabilized polymer networks for high-throughput microchannel DNA sequencing

Analytical Chemistry

Volumn 76, Issue 18, 2004, Pages 5249-5256

  Doherty, Erin A S ^a   Kan, Cheuk Wai ^a   Paegel, Brian M ^b   Yeung, Stephanie H I ^b   Cao, Shitong ^a   Mathies, Richard A ^b   Barron, Annelise E ^a  

^a Northwestern University   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CAPILLARITY; COPOLYMERIZATION; ELECTROPHORESIS; GELS; LASERS; LIGHT SCATTERING; MATRIX ALGEBRA; POLYMERS;

LINEAR POLYACRYLAMIDE (LPA); MICROCHIPS; NANOGELS; RHEOMETRY;

DNA SEQUENCES;

DNA; GLASS; N,N' METHYLENEBISACRYLAMIDE; POLYACRYLAMIDE; POLYMER;

ACCURACY; ADDITION REACTION; ARTICLE; CROSS LINKING; DNA SEQUENCE; ELECTROPHORESIS; EMULSION; FLOW MEASUREMENT; LIGHT SCATTERING; NANOTECHNOLOGY; POLYMERIZATION; SEPARATION TECHNIQUE; STANDARD; STATISTICAL SIGNIFICANCE; STRUCTURE ANALYSIS;

ACRYLIC RESINS; DNA; ELECTROPHORESIS, CAPILLARY; ELECTROPHORESIS, POLYACRYLAMIDE GEL; MICROFLUIDICS; NANOSTRUCTURES; POLYMERS; SEQUENCE ANALYSIS, DNA;

EID: 4544343075     PISSN: 00032700     EISSN: None     Source Type: Journal    
DOI: 10.1021/ac049721x     Document Type: Article

References (45)

1. Bernal, A.; Ear, U.; Kyrpides, N. Nucleic Acids Res. 2001, 29, 126-127.
2. Doherty, E. A. S.; Kan, C. W.; Barron, A. E. Electrophoresis 2003, 24, 4170-4180.
3. Chrambach, A.; Rodbard, D. Science 1971, 172, 440-450.
4. Bishop, D. H.; Claybrook, L., Jr.: Spiegel, M. S. J. Mol. Biol. 1967, 26, 373-&.
5. Ansorge, W.; Voss, H.; Weimann, S.; Schwager, C.; Sproat, B.; Zimmermann, J.; Stegemann, J.; Erfle, H.; Hewitt, N.; Rupp, T. Electrophoresis 1992, 13, 616-619.
6. Cheng, J. Prog. Biochem. Biophys. 1995, 22, 223-227.
7. Huang, X. C.; Quesada, M. A.; Mathies, R. A. Anal. Chem. 1992, 64, 967-972.
8. Huang, X. C.; Quesada, M. A.; Mathies, R. A. Anal. Chem. 1992, 64, 2149-2154.
9. Kambara, H.; Takahashi, S. Nature 1993, 361, 565-566.
10. Mathies, R. A.; Huang, X. C. Nature 1992, 359, 167-169.
11. Heiger, D. N.; Cohen, A. S.; Karger, B. L. J. Chromatogr. 1990, 33-48.
12. Cohen, A. S.; Najarian, D. R.; Karger, B. L. J. Chromatogr. 1990, 516, 49.
13. Guttman, A.; Cohen, A. S.; Heiger, D. N.; Karger, B. L. Anal. Chem. 1990, 62, 137-141.
14. Harke, H. R.; Bay, S.; Zhang, J. Z.; Rocheleau, M. J.; Dovichi, N. J. J. Chromatogr. 1992, 608, 143-150.
15. Smith, L. M. Nature 1991, 349, 812-813.
16. Drossman, H.; Luckey, J. A.; Kostichka, A. J.; Dcunha, J.; Smith, L. M. Anal. Chem. 1990, 62, 900-903.
17. Luckey, J. A.; Drossman, H.; Kostichka, A. J.; Mead, D. A.; Dcunha, J.; Norris, T. B.; Smith, L. M. Nucleic Acids Res. 1990, 18, 4417-4421.
18. Baba, Y.; Matsuura, T.; Wakamoto, K.; Morita, Y.; Nishitsu, Y.; Tsuhako, M. Anal. Chem. 1992, 64, 1221-1225.
19. Bae, Y. C.; Soane, D. J. Chromatogr., A 1993, 652, 17-22.
20. Ruiz-Martinez, M. C.; Berka, J.; Belenkii, A.; Foret, F.; Miller, A. W.; Karger, B. L. Anal. Chem. 1993, 65, 2851-2858.
21. Albarghouthi, M.; Barron, A. E. Electrophoresis 2000, 21, 4096-4111.
22. Carrilho, E.; Ruiz-Martinez, M. C.; Berka, J.; Smirnov, I.; Goetzinger, W.; Miller, A. W.; Brady, D.; Karger, B. L. Anal. Chem. 1996, 68, 3305-3313.
23. Zhou, H.; Miller, A. W.; Sosic, Z.; Buchholz, B.; Barron, A. E.; Kotler, L.; Karger, B. L. Anal. Chem. 2000, 72, 1045-1052.
24. Madabhushi, R. S.; Vainer, M.; Dolnik, V.; Enad, S.; Barker, D. L.; Harris, D. W.; Mansfield, E. S. Electrophoresis 1997, 18, 104-111.
25. Madabhushi, R. S. Electrophoresis 1998. 19, 224-230.
26. Gao, Q. F.; Yeung, E. S. Anal. Chem. 1998, 70, 1382-1388.
27. Albarghouthi, M. N.; Buchholz, B. A.; Huiberts, P. J.; Stein, T. M.; Barron, A. E. Electrophoresis 2002, 23, 1429-1440.
28. Albarghouthi, M. N.; Buchholz, B. A.; Doherty, E. A. S.; Bogdan, F. M.; Zhou, H.; Barron, A. E. Electrophoresis 2001, 22, 737-747.
29. Buchholz, B. A.; Doherty, E. A. S.; Albarghouthi, M. N.; Bogdan, F. M.; Zahn, J. M.; Barron, A. E. Anal. Chem. 2001, 73, 157-164.
30. Salas-Solano, O.; Carrilho, E.; Kotler, L.; Miller, A. W.; Goetzinger, W.; Sosic, Z.; Karger, B. L. Anal. Chem. 1998, 70, 3996-4003.
31. Ugaz, V. M.; Burke, D. T.; Burns, M. A. Electrophoresis 2002, 23, 2777-2787.
32. Buchholz, B. A.; Barron, A. E. Electrophoresis 2001, 22, 4118-4128.
33. Menchen, S.; Johnson, B.; Winnik, M. A.; Xu, B. Electrophoresis 1996, 17, 1451-1459.
34. Simpson, P. C.; Roach, D.; Wooley, A. T.; Thorsen, T.; Johnston, R.; Sensabaugh, G. F.; Mathies, R. A. Proc. Natl. Acad. Sci. U.S.A. 1998, 95, 2256-2261.
35. Paegel, B. M.; Emrich, C. A.; Wedemayer, G. J.; Scherer, J. R.; Mathies, R. A. Proc. Natl. Acad. Sci. U.S.A. 2002, 99, 574-579.
36. Hjerten, S. J. Chromatogr. 1985, 347, 191-198.
37. Scherer, J. R.; Paegel, B. M.; Wedemayer, G. J.; Emrich, C. A.; Lo, J.; Medintz, I. L.; Mathies, R. A. Biotechniques 2001, 31, 1150.
38. Shi, Y. N.; Simpson, P. C.; Scherer, J. R.: Wexler, D.; Skibola, C.; Smith, M. T.; Mathies, R. A. Anal. Chem. 1999, 71, 5354-5361.
39. Sudor, J.; Barbier, V.; Thirot, S.; Godfrin, D.; Hourdet, D.; Millequant, M.; Blanchard, J.; Viovy, J.-L. Electrophoresis 2001, 22, 720-728.
40. Barbier, V.; Buchholz, B. A.; Barron, A. E.; Viovy, J. L. Electrophoresis 2002, 23, 1441-1449.
41. Cottet, H.; Gareil, P.; Viovy, J.-L. Electrophoresis 1998, 19, 2151-2162.
42. Heller, C. Electrophoresis 1999, 20, 1962-1977.
43. Viovy, J.-L.; Duke, T. Electrophoresis 1993, 14, 322-329.
44. He, H.; Buchholz, B. A.; Kotler, L.; Miller, A. W.; Barron, A. E.; Karger, B. L. Electrophoresis 2002, 23, 1421-1428.
45. Kan, C. W.; Doherty, E. A. S.; Barron, A. E. Electrophoresis 2003, 24, 4161-4169.