Positioning isolation and biochemical analysis of single DNA molecules based on nanomanipulation and single-molecule PCR

Journal of the American Chemical Society

Volumn 126, Issue 36, 2004, Pages 11136-11137

  Lü, Jun Hong ^a   Li, Hai Kuo ^b   An, Hong Jie ^b   Wang, Guo Hua ^a   Wang, Ying ^a   Li, Min Qian ^a   Zhang, Yi ^a   Hu, Jun ^a,b  

^a SHANGHAI INSTITUTE OF APPLIED PHYSICS   (China)

^b SHANGHAI JIAO TONG UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; DNA FRAGMENT; GENOMIC DNA; MESSENGER RNA; PLASMID DNA;

ARTICLE; ATOMIC FORCE MICROSCOPY; DNA DAMAGE; DNA DETERMINATION; DNA ISOLATION; DNA SEQUENCE; DNA STRUCTURE; GENE AMPLIFICATION; GENE LOCATION; GENE MAPPING; GENETIC MANIPULATION; HAPLOTYPE; IMAGING SYSTEM; NONHUMAN; POLYMERASE CHAIN REACTION; REPRODUCIBILITY; SCANNING TUNNELING MICROSCOPY; TECHNIQUE; TOPOGRAPHY;

DNA; MICROSCOPY, ATOMIC FORCE; NANOTECHNOLOGY; PLASMIDS; POLYMERASE CHAIN REACTION;

EID: 4544319654     PISSN: 00027863     EISSN: None     Source Type: Journal    
DOI: 10.1021/ja047124m     Document Type: Article

References (39)

1. Namasivayam, V.; Larson. R. G.; Burke, D. T.; Burns, M. A. Anal. Chem. 2003, 75, 4188-4194.
2. Lu, J. H.; Wu, S. Y.; Wang, G. H.; Lei, X. L.; Kons, X. Y.; Chen, R. S.; Zhu, L. H.; Li, M. Q.; Hu, J. J. Chin. Electron Microsc. Soc. 2003, 22, 185-188.
3. Mizuno, A.; Katsura, S. J. Biol. Phys. 2002, 28, 587-603.
4. Ruano, G.; Kidd, K. K.; Stephens, J. C. Proc. Natl. Acad. Sci. U.S.A. 1990, 87, 6296-6300.
5. Ding, C.; Cantor, C. R. Proc. Natl. Acad. Sci. U.S.A. 2003, 100, 7449-7453.
6. Eigen, M.; Rigler, R. Proc. Natl. Acad. Sci. U.S.A. 1994, 91, 5740-5747.
7. Zhao, X.; Tapec-Dytioco, R.; Wang, K.; Tan, W. Anal. Chem. 2003, 75, 3476-3483.
8. Hashiguchi, G.; Goda, T.; Hosogi, M.; Hirano, K.; Kaji, N.; Baba, Y.; Kakushima, K.; Fujita, H. Anal. Chem. 2003, 75, 4347-4350.
9. Shortreed, M. R.; Li, H.; Huang, W.; Yeung, E. S. Anal. Chem. 2000, 72. 2879-2885.
10. Yamamoto, T.; Kurosawa, O.; Kabata, H.; Shimamoto, N.; Washizu, M. IEEE Trans. Ind. Appl. 2000, 36, 1010-1016.
11. Gimzewski, J. K.; Joachim, C. Science 1999, 283, 1683-1688.
12. Oyabu, N.; Custance, O.; Yi, I.; Sugawara, Y.; Montai, S. Phys. Rev. Lett. 2003, 90, 176102.
13. Dudko, O.; Filippov, A. E.; Klafter, J.; Urbakh, M. Nano Lett. 2003, 3, 795-798.
14. Bigler, D. M.; Schweizer, E. K. Nature 1990, 344, 524-526.
15. Jung. T. A.; Schlittler, R. R.; Gimzewski, J. K.; Tang, H.; Joachim, C. Science 1996, 277, 181-184.
16. Finer, D.; Zhu, J.; Xu, F.; Hong, S.; Mirkin, C. A. Science 1999, 283, 661-663.
17. Pascual, J. I.; Lorente, N.; Song, Z.; Conrad, H.; Rust, H. P. Nature 2003, 423, 525-528.
18. Jacobs, D. C. Nature 2003, 423, 488-489.
19. Yamachika, R.; Grobis, M.; Wachowiak, A.; Crommie, M. F. Science 2004, 304, 281-284.
20. Fotiadis, D.; Scheuring, S.; Müller, S. A.; Engel. A.; Müller, D. J. Micron 2002, 33, 385-397.
21. Thalhammer, S.; Stark, R. W.; Müller, S.; Wienberg, J.; Heckl, W. M. J. Struct. Biol. 1997, 119, 232-237.
22. Stark, R. W.; Thalhammer, S.; Wienberg, J.; Heckl, W. M. Appl. Phys. A 1998, 66, S579-S584.
23. Xu, X. M.; Ikai, A. Anal. Chim. Acta 1998, 361, 1-7.
24. Guthold, M.; Cubicciotti, R.; Superfine, R.; Taylor, R. Biophys. J. (Annual Meeting Abstracts) 2002, 82, 163.
25. Osada, T.; Uehara, H.; Kim, H.; Ikai, A. J. Nanobiotech. 2003, 1, 2.
26. Hu, J.; Zhang, Y.; Gao, H. B.; Li, M. Q.; Hartmann, U. Nano Lett. 2002, 2, 55-57.
27. 2 (7: 3) for 30 min, washed thoroughly with Milli-Q water, and dried in air. The tips were further sterilized using UV radiation and kept under sterile conditions before use.
28. Bensimon, A.; Simon, A.; Chiffaudel, A.; Croquette, V.; Heslot, F.; Bensimon, D. Science 1994, 265, 2096-2098.
29. Ouyang, Z.; Hu, J.; Chen, S. F.; Sun, J. L.; Li, M. Q. J. Vac. Sci. Technol. B 1997, 15, 1385-1387.
30. Hu, J.; Wang. M. H.; Weier, U. G.; Kolbe, W.; Ogletree, D. F.; Salmeron, M. Langmuir 1996, 12, 1697-1700.
31. Lagally, E. T.; Medintz, I.; Mathies, R. A. Anal. Chem. 2001, 73, 565-570.
32. Li, H.; Xue, G.; Yeung, E. S. Anal. Chem. 2001, 73, 1537-1543.
33. Nakano, M.; Komatsu, J.; Matsuura, S.; Takashima, K.; Katsura, S.; Mizuno, A. J. Biotechnol. 2003, 702, 117-124.
34. Ohuchi, S.; Nakano, H.; Yamane, T. Nucleic Acids Res. 1998, 26, 4339-4346.
35. Mitra, R. D.; Church, G. M. Nucleic Acids Res. 1999, 27, e34.
36. Wabuyele, M. B.; Soper, S. A. Single Mol. 2001, 1, 13-21.
37. Nakano, H.; Kobayashi, K.; Ohuchi, S.; Sekiguchi, S.; Yamane, T. J. Biosci. Bioeng. 2000, 4, 456-458.
38. Rungpragayphan, S.; Kawarasaki, Y.; Imaeda, T.; Kohda, K.; Nakano, H.; Yamane, T. J. Mol. Biol. 2002, 318, 395-405.
39. Grace, M.; Buzard, G. S.; Hughes, M. R.; Gore-Langton, R. E. Anal. Biochem. 1998, 263, 85-92.