Quantitative trait loci for phyllochron and tillering in rice

Theoretical and Applied Genetics

Volumn 109, Issue 4, 2004, Pages 700-706

  Miyamoto, N ^a   Goto, Y ^b   Matsui, M ^b   Ukai, Y ^c   Morita, M ^a   Nemoto, K ^a  

^a UNIVERSITY OF TOKYO   (Japan)

^b TOHOKU UNIVERSITY   (Japan)

^c UNIVERSITY OF TOKYO   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

BIODIVERSITY; CHROMOSOMES; GENETIC ENGINEERING; MAPPING; MUTAGENS;

MORPHOGENETIC PROCESS; MUTATION; RICE CROPS; SHOOT SYSTEMS;

PLANTS (BOTANY);

AGAR GEL ELECTROPHORESIS; ARTICLE; CHROMOSOME MAP; COMPARATIVE STUDY; CROSS BREEDING; GENETIC LINKAGE; GENETICS; GROWTH, DEVELOPMENT AND AGING; PLANT; PLANT LEAF; QUANTITATIVE TRAIT LOCUS; RICE; TIME; VARIABLE NUMBER OF TANDEM REPEAT;

CHROMOSOME MAPPING; CROSSES, GENETIC; ELECTROPHORESIS, AGAR GEL; LOD SCORE; MINISATELLITE REPEATS; ORYZA SATIVA; PLANT LEAVES; PLANT SHOOTS; QUANTITATIVE TRAIT LOCI; TIME FACTORS;

JAPONICA; ORYZA SATIVA; ZEA MAYS;

EID: 4544221406     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-004-1690-0     Document Type: Article

References (31)

1. Ahn S, Tanksley SD (1993) Comparative linkage maps of the rice and maize genomes. Proc Natl Acad Sci USA 90:7980-7984
2. Ahn BO, Miyoshi K, Itoh J-I, Nagato Y, Kurata N (2002) A genetic and physical map of the region containing PLASTOCHRON1, a heterochronic gene, in rice (Oryza sativa L.). Theor Appl Genet 105:654-659
3. Araki E, Ebron LA, Cuevas RP, Mercado-Escueta D, Khush GS, Sheehy JE, Kato H, Fukuta Y (2003) Identification of low tiller gene in rice cultivar Aikawal. Breed Res 5[Suppl 1]:95
4. Chen X, Temnykh S, Xu Y, Cho YG, McCouch SR (1997) Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.). Theor Appl Genet 95:553-567
5. Dofing SM (1999) Inheritance of phyllochron in barley. Crop Sci 39:334-337
6. Friend DJC (1965) Tillering and leaf production in wheat as affected by temperature and light intensity. Can J Bot 43:1063-1076
7. Goto Y, Hoshikawa K (1989) Tillering behavior in Oryza sativa L. V. Analysis of varietal differences in tillering patterns (in Japanese). Jpn J Crop Sci 58:520-529
8. Gould SJ (1982) Change in development timing as a mechanism of macroevolution. In: Bonner JT (ed) Evolution and development. Springer, Berlin Heidelberg New York, pp 333-346
9. Haun JR (1973) Visual quantification of wheat development. Agron J 65:116-119
10. Hay RKM, Kirby, EJ (1991) Convergence and synchrony: a review of the coordination of development in wheat. Aust J Agric Res 42:661-700
11. Khush GS (2000) New plant type of rice for increasing the genetic yield potential. In: Nanda JS (ed) Rice breeding and genetics. Science Publishers, New Hampshire, pp 99-108
12. Klepper B, Rickman RW, Peterson CM (1982) Quantitative characterization of vegetative development in small cereal grains. Agron J 74:789-792
13. Kurata N, Nagamura Y, Yamamoto K, Harushima Y, Sue N, Wu J, Antonio BA, Shomura A, Shimizu T, Lin SY, Inoue T, Fukuda A, Shimano T, Kuboki Y, Toyama T, Miyamoto Y, Kirihara T, Hayasaka K, Miyao A, Monna L, Zhong HS, Tamura Y, Wang ZX, Momma T, Umehara Y, Yano M, Sasaki T, Minobe Y (1994) A 300-kilobase- interval genetic map of rice including 883 expressed sequences. Nat Genet 8:365-372
14. Lander ES, Green P, Abrahamson, Barlow A, Daly MJ, Lincoln SE, Newburg L (1987)MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1:174-181
15. 2 population from a cross between the parents of an elite rice hybrid. Theor Appl Genet 101:248-254
16. Liao CY, Wu P, Hu B, Yi KK (2001) Effects of genetic background and environment on QTLs and epistasis for rice (Oryza sativa L.) panicle number. Theor Appl Genet 103:104-111
17. Luo LJ, Li ZK, Mei HW, Shu QY, Tabien R, Zhong DB, Ying CS, Stansel JW, Khush GS, Paterson AH (2001) Overdominant epistatic loci are the primary genetic basis of inbreeding depression and heterosis in rice. II. Grain yield components. Genetics 158:1755-1771
18. McCouch SR, Kochert G, Wang ZH, Khush GS, Coffman WR, Tanksley SD (1988) Molecular mapping of rice chromosomes. Theor Appl Genet 76:815-829
19. McCouch SR, Teytelman L, Xu Y, Lobos KB, Clare K, Walton M, Fu B, Maghirang R, Li Z, Xing Y, Zhang Q, Kono I, Yano M, Fjellstrom R, DeClerck G, Schneider D, Cartinhour S, Ware D, Stein L (2002) Development and mapping of 2240 new SSR markers for rice (Oryza sativa L.). DNA Res 9:199-207
20. McMaster GS, Klepper B, Rickman RW, Wilhelm WW, Willis WO (1991) Simulation of aboveground vegetative development and growth of unstressed winter wheat. Ecol Model 53:189-204
21. Mitchell KJ (1953) Influence of light and temperature on the growth of ryegrass (Lolium spp.). I. Pattern of vegetative development. Physiol Plant 6:21-46
22. Moore KJ, Moser LE (1995) Quantifying developmental morphology of perennial grasses. Crop Sci 35:37-43
23. Nemoto K, Morita S, Baba T (1995) Shoot and root development in rice related to the phyllochron. Crop Sci 35:24-29
24. Poethig RS (1988) Heterochronic mutations affecting shoot development in maize. Genetics 119:959-973
25. Ray JD, Yu L, McCouch SR, Champoux MC, Wang G, Nguyen HT (1996) Mapping quantitative trait loci associated with root penetration ability in rice (Oryza sativa L.). Theor Appl Genet 92:627-636
26. Veit B, Briggs SP, Schmidt RJ, Yanofsky MF, Hake S (1998) Regulation of leaf initiation by the terminal ear 1 gene of maize. Nature 393:166-168
27. Wang S, Basten CJ, Zeng Z-B (2001-2003) Windows QTL CARTOGRAPHER 2.0. Department of Statistics, North Carolina State University, Raleigh, N.C. (http://statgen.ncsu.edu/qtlcart/WQTLCart.htm)
28. Yan JQ, Zhu J, He CX, Benmoussa M, Wu P (1998) Quantitative trait loci analysis for the developmental behavior of tiller number in rice (Oryza sativa L.). Theor Appl Genet 97:267-274
29. Yin X, Kropff MJ (1996) The effect of temperature on leaf appearance in rice. Ann Bot 77:215-221
30. Zhu H, Qu F, Zhu LH (1993) Isolation of genomic DNAs from plants, fungi and bacteria using benzyl chloride. Nucleic Acids Res 21:5279-5280
31. Zhuang JY, Fan YY, Rao ZM, Wu JL, Xia YW, Zheng KL (2002) Analysis on additive effects and additive-by-additive epistatic effects of QTLs for yield traits in a recombinant inbred line population of rice. Theor Appl Genet 105:1137-1145