The succession of microbial community in the organic rich fish-farm sediment during bioremediation by introducing artificially mass-cultured colonies of a small polychaete, Capitella sp. I

Marine Pollution Bulletin

Volumn 57, Issue 1-5, 2008, Pages 68-77

  Kunihiro, Tadao ^a   Miyazaki, Tomoaki ^a   Uramoto, Yuuta ^a   Kinoshita, Kyoko ^a   Inoue, Akihiro ^a   Tamaki, Sayaka ^a   Hama, Daigo ^b   Tsutsumi, Hiroaki ^a   Ohwada, Kouichi ^a  

^a PREFECTURAL UNIVERSITY OF KUMAMOTO   (Japan)

^b Keiten Co Ltd   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

BIODEGRADATION; BIOREMEDIATION; BIOTECHNOLOGY; FARMS; POLLUTION; SEDIMENTATION; SEDIMENTOLOGY;

CAPITELLA; MICROBIAL COMMUNITIES; SEASONAL CHANGES;

FISH;

ORGANIC MATTER; UBIDECARENONE; WATER;

ABUNDANCE; BACTERIUM; BIOACTIVITY; BIOREMEDIATION; COMMUNITY COMPOSITION; COMMUNITY RESPONSE; DECOMPOSITION; ENVIRONMENTAL MONITORING; FISHERY; GROWTH RESPONSE; MICROBIAL COMMUNITY; ORGANIC FARMING; POLYCHAETE; SEASONAL VARIATION; SUCCESSION; WATER TEMPERATURE;

ARTICLE; BACTERIAL GROWTH; BIOLOGICAL ACTIVITY; BIOREMEDIATION; CAPITELLA; DECOMPOSITION; JAPAN; MICROBIAL BIOMASS; MICROBIAL COMMUNITY; NONHUMAN; PISCICULTURE; POLYCHAETA; PROTEOBACTERIA; SEDIMENT; WATER TEMPERATURE; WORM;

ANIMAL FEED; ANIMALS; BACTERIA; BENZOQUINONES; BIOMASS; CARBON; CLUSTER ANALYSIS; ECOSYSTEM; ENVIRONMENTAL REMEDIATION; FISHERIES; GEOLOGIC SEDIMENTS; OXIDATION-REDUCTION; POLYCHAETA; SEASONS;

AMAKUSA; ASIA; EURASIA; FAR EAST; JAPAN; KUMAMOTO; KUSUURA BAY; KYUSHU;

BACTERIA (MICROORGANISMS); CAPITELLA; POLYCHAETA; PROTEOBACTERIA;

EID: 44949231456     PISSN: 0025326X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.marpolbul.2007.10.009     Document Type: Article

References (47)

1. Alongi D.M. Microbes, meiofauna, and bacterial productivity on tubes constructed by the polychaete Capitella capitata. Mar. Ecol. Prog. Ser. 23 (1985) 207-208
2. Chareonpanich C., Montani S., Tsutsumi H., and Matsuoka S. Modification of chemical characteristics of organically enriched sediment by Capitella sp. I. Mar. Pollut. Bull. 26 (1993) 375-379
3. Chareonpanich C., Montani S., and Tsutsumi H. Roles of a deposit-feeding polychaete, Capitella sp. I, on the biological and chemical changes of the experimental marine sediment systems. Tech. Bull. Fac. Agr. Kagawa Univ. 46 (1994) 21-26
4. Chareonpanich C., Tsutsumi H., and Montani S. Efficiency of the decomposition of organic matter, loaded on the sediment, as a result of the biological activity of Capitella sp. I. Mar. Pollut. Bull. 28 (1994) 314-318
5. Collins M.D., and Jones D. Distribution of isoprenoid quinones structural types in bacteria and their taxonomic implications. Microbiol. Rev. 45 (1981) 316-354
6. Danovaro R. Detritus-bacteria-meiofauna interactions in a seagrass bed (Posidonia oceanica) of the NM Mediterranean. Mar. Biol. 127 (1996) 1-13
7. Fenchel T. The quantitative importance of the benthic microfauna of an arctic tundra pond. Hydrobiologia 46 (1975) 445-464
8. Findlay R.H., and Watling L. Environmental impact of salmon net-pen culture on marine benthic communities in marine: a case study. Estuar 18 (1995) 145-179
9. Fry J.C. Interactions between bacteria and benthic invertebrates. In: Nedwell D.B., and Brown C.M. (Eds). Sediment Microbiology (1982), Academic Press, New York 171-201
10. Hedrick D.B., and White D.C. Microbial respiratory quinones in the environment. J. Microbiol. Meth. 5 (1986) 243-254
11. Hiraishi A., Iwasaki M., Kawagishi T., Yoshida N., Narihiro T., and Kato K. Significance of lipoquinones as quantitative biomarkers of bacterial populations in the environment. Microbes Environ. 18 (2003) 89-93
12. Hiraishi A. Isoprenoid quinones as biomarkers of microbial populations in the environment. J. Biosci. Bioeng. 88 (1999) 449-460
13. Hiraishi A., Morishima Y., and Takeuchi J. Numerical analysis of lipoquinone patterns in monitoring bacterial community dynamics in wastewater treatment systems. J. Gen. Appl. Microbiol. 37 (1991) 57-70
14. Holmer M., and Kristensen E. Impact of marine fish cage farming on metabolism and sulphate reduction of under-lying sediments. Mar. Ecol. Prog. Ser. 80 (1992) 191-201
15. Hoppe H.-G., Arnosti C., and Herndl G.F. Ecological significance of bacterial enzymes in the marine environment. In: Burns R.G., and Dick R.P. (Eds). Enzymes in the Environment (2002), Marcel Dekker, New York 73-107
16. Hu H.-Y., Fujie K., Nakagome H., Urano K., and Katayama A. Quantitative analyses of the change in microbial diversity in a bioreactor for wastewater treatment based on respiratory quinines. Water Res. 33 (1999) 3263-3270
17. Hu H.-Y., Lim B.-R., Goto N., and Fujie K. Analytical precision and repeatability of respiratory quinones for quantitative study of microbial community structure in environmental samples. J. Microbiol. Meth. 47 (2001) 17-24
18. Hutson K.G., and Threlfall D.R. Biochemistry of terpenoid quinones and chromanols. In: Levandowsky M., and Hutner S.H. (Eds). Biochemistry and Physiology of Protozoa (1980), Academic Press, New York 255-286
19. James P.G., and Russell P.H. Phylogenetic analysis of the bacterial communities in marine sediments. Appl. Environ. Microbiol. 62 (1996) 4049-4059
20. Karakassis I., and Hatziyanni E. Benthic disturbance due to fish farming analyzed under different levels of taxonomic resolution. Mar. Ecol. Prog. Ser. 203 (2000) 247-253
21. Karakassis I., Tsapakis M., and Hatziyanni E. Seasonal variability in sediment profiles beneath fish-farm cages in the Mediterranean. Mar. Ecol. Prog. Ser. 162 (1998) 243-252
22. Katayama A., Kai K., and Fujie K. Characterization of soil microbiota with quinone profile. In: Bollag J.M., and Storzky G. (Eds). Soil Biochemistry vol. 10 (2000), Marcel Dekker, New York 303-347
23. Mazzola A., Mirto S., and Danovaro R. Initial fish-farm impact on meiofaunal assemblages in coastal sediments of the Western Mediterranean. Mar. Pollut. Bull. 38 (1999) 1126-1133
24. Meyer-Reil L.-A. Ecological aspects of enzymatic activity in marine sediments. In: Chróst R.J. (Ed). Microbial Enzymes in Aquatic Environments (1991), Springer-Verlag, Berlin 84-95
25. Montani S., and Tsutsumi H. Environmental bioremediation in bottom mud by benthos. In: Ichida Y., and Hino A. (Eds). Environmental Bioremediation by Biological Processes - The Possibility of Bioremediation in Fisheries Environments (1996), Kouseisha-Kouseikaku, Tokyo 65-78 (Japanese)
26. Pawar V., Matsuda O., and Fujioka N. Relationship between feed input and sediment quality of the fish cage farms. Fish Sci. 68 (2002) 894-903
27. Rosenberg R. Succession in benthic macrofauna in a Swedish fjord subsequent to the closure of a sulphide pulp mill. Oikos 24 (1973) 255-258
28. Rosenberg R. Benthic faunal dynamics during succession following pollution abatement in a Swedish estuary. Oikos 27 (1976) 414-427
29. Saitou K., Nagasaki K., Yamakawa H., Hu H.-Y., and Fujie K. Linear relation between the amount of respiratory quinones and the microbial biomass in soil. Soil Sci. Plant Nutr. 45 (1999) 775-778
30. Srithongouthai S., Endo A., Inoue A., Kinoshita K., Yoshioka M., Sato A., Iwasaki T., Teshiba I., Nashiki H., Hama D., and Tsutsumi H. Control of dissolved oxygen levels of the water in the net pens for fish farming with a microscopic bubble generating system. Fish Sci. 72 (2006) 485-493
31. Tsutsumi H., and Kikuchi T. Benthic ecology of a small cove with seasonal oxygen depletion caused by organic pollution. Publ. Amakusa Mar. Biol. Lab. 7 (1983) 17-40
32. Tsutsumi H. Population dynamics of Capitella capiteta (Polychaeta; Capitellidae) in an organically polluted cove. Mar. Ecol. Prog. Ser. 36 (1987) 139-149
33. Tsutsumi H. Population persistence of Capitella sp. (Polychaeta; Capitellidae) on a mud flat subject to environmental disturbance by organic enrichment. Mar. Ecol. Prog. Ser. 63 (1990) 147-156
34. Tsutsumi H., Kikuchi T., Tanaka M., Higashi T., Imasaka K., and Miyazaki M. Benthic faunal succession in a cove organically polluted by fish farming. Mar. Pollut. Bull. 23 (1991) 233-238
35. Tsutsumi H., Kinoshita K., Srithongouthai S., Sato A., Nagata S., Inoue A., Yoshioka M., Ohwada K., and Hama D. Treatment of the organically enriched sediment below the fish-farm with the biological activities of the artificially mass-cultured colonies of a small deposit feeding polychaete, Capitella sp. I. Benthos Res. 60 (2005) 17-24
36. Tsutsumi H. Impact of fish net pen culture on the benthic environment of a cove in south Japan. Estuar 18 (1995) 108-115
37. Tsutsumi H., and Montani S. Utilization of biological activities of capitellied polychaete for treatment of "Hedoro" (organically enriched sediment) deposited on the marine bottom below fish net pen culture. Nippon Suisan Gakkaishi 59 (1993) 1343-1347 (Japanese)
38. Tsutsumi H., Montani S., and Kobe H. Bioremediation of organic matter loaded on the sediment in outdoor pools with a polychaete, Capitella sp. 1. Fish Sci 68 (2002) 613-616
39. Urakawa H., Kita-Tsukamoto K., and Ohwada K. Microbial diversity in marine sediments from Sagami Bay and Tokyo Bay, Japan, as determined by 16S rRNA gene analysis. Microbiology 145 (1999) 3305-3315
40. Vezzulli L., Chelossi E., Riccardi G., and Fabiano M. Bacterial community structure and activity in fish-farm sediments of the Ligrian sea (Western Mediterranean). Aquacul. Int. 10 (2002) 123-141
41. Wada M., Wu S.-S., Kogure K., and Tsutsumi H. Short-term impact of biological activities of a burrowing polychaete, Capitella sp. I, on bacterial abundance and the chemical characteristics in organically enriched sediment. Benthos Res. 60 (2005) 59-66
42. WFCC-MIRCEN World Data Centre for Microorganisms (WDCM) database. Available from .
43. Wu R.S.S. The environmental impact of marine fish culture: towards a sustainable future. Mar. Pollut. Bull. 31 (1995) 159-166
44. Wu S.S., Tsutsumi H., Kita-Tsukamoto K., Kogure K., Ohwada K., and Wada M. Visualization of the respiring bacteria in sediments inhabited by Capitella sp. I. Fish Sci. 69 (2003) 170-175
45. Yokota A., Akagawa-Mathusita M., Hiraishi A., Katayama Y., Urakami T., and Yamasato K. Distribution of quinone systems in microorganisms: Gram-negative eubacteria. Bull JFCC 8 (1992) 136-171
46. Yokoyama H. Impact of fish and pearl farming on the benthic environments in Gokasho Bay: Evaluation from seasonal fluctuation of the macrobenthos. Fish Sci. 68 (2002) 258-268
47. Yokoyama H., Abo K., Toyokawa M., Toda S., and Yamamoto S. Impact of mariculture on the spatial and temporal patterns of the macrobenthos in Gokasyo Bay. Bull. Natl. Res. Inst. Aquacul. 3 (1997) 7-16