Epidemiological surveillance of P and G genotypes of group A rotavirus detected from diarrheic patients in Daejeon region

Journal of Bacteriology and Virology

Volumn 37, Issue 3, 2007, Pages 169-175

  Park, Sun Kyoung ^a   Heo, Young Sun ^a   Bing, Sun Hye ^a   Cheon, Doo Sung ^b   Chu, Jiaqi ^c   Jun, Moo Hyung ^c  

^a Division of Infectious Disease   (South Korea)

^b Korea Centers for Disease Control and Prevention   (South Korea)

^c Chungnam National University   (South Korea)

Author keywords

Acute gastroenteritis; Nested multiplex PCR; P and G genotypes; Rotavirus

Indexed keywords

ACUTE GASTROENTERITIS; ARTICLE; CONTROLLED STUDY; DIARRHEA; ENZYME LINKED IMMUNOSORBENT ASSAY; FECES ANALYSIS; GENOTYPE; KOREA; MULTIPLEX POLYMERASE CHAIN REACTION; NONHUMAN; PREVALENCE; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; ROTAVIRUS; VIRUS DETECTION; VIRUS STRAIN;

ROTAVIRUS; ROTAVIRUS A;

EID: 44849144349     PISSN: 15982467     EISSN: None     Source Type: Journal    
DOI: 10.4167/jbv.2007.37.3.169     Document Type: Article

References (35)

1. Korean source
2. Barnes GL: Etiology of acute gastroenteritis in hospitalized children in Melbourne, Australia, from April 1980 to March 1993. J Clin Microbiol 36: 133-138, 1998.
3. Beards GM, Dessel BU, Flewett TH: Temporal and geographical distributions of human rotavirus serotypes, 1983 to 1988. J Clin Microbiol 27: 2827-2833, 1989.
4. Bern C, Martines J, Zoysa I, Glass RI: The magnitude of the global problem of diarrheal disease: a ten-year up-date. Bull WHO 70: 705-714, 1992.
5. Bishop RF: Natural history of human rotavirus infections. pp131-167. In Vial Infections of the Gastrointerstinal Tract, 2nd ed., Kapikian AZ(Ed). Marcel Dekker, New York, 1994.
6. Bishop RF, Davidson GP, Holmes IH, Ruck BJ: Detection of a new virus by electron microscopy of fecal extracts from children with acute gastroenteritis. Lancet 1: 149-151, 1973.
7. Bresee JS, Parashar UD, Gentsch JR, Glass RI: Rotavirus vaccines :review, Rationale and prospects. Vaccines Children Practice 2: 8-11, 1999.
8. Cha KJ, Song JO, Cho HC: Serotype and nucleotide analysis of human rotavirus isolates in Korea. J Korean Soc Virology 29: 75-85, 1999.
9. Chung JK, Song HJ, Kim SH, Seo JJ, Kee HY, Kim ES, Ha DR, Ryu PY, Lee JI: Epidemiological study of viral diarrhea in Gwangju area during 2000-2002. JBV 36: 195-203, 2006.
10. Cubitt WD, Steele AD, Iturriza M: Characterization of rotavirus from children treated at a London hospital during 1996: emergence of strain G9P2A[6] and G3P2A[6]. J Med Virol 61: 150-154. 2000.
11. Estes MK, Kapikian A: Rotavirus and their replication. pp1917-1974, In Fields Virology Vol 2, 5th ed, Knipe D et al. (Ed), Lippincott Willians and Wilkins, Philadelphia, 2007.
12. Gentsch JR, Glass RI, Woods P: Identification of group A rotavirus gene 4 types by polymerase chain reaction. J Clin Microbiol 30: 1365-1373, 1992.
13. Gouvea V, Castro L, Timenetsky MD, Greenberg H, Santos N: Rotavirus serotype G5 associated with diarrhea in Brazilian children. J Clin Microbiol 32: 1408-1409, 1994.
14. Gouvea V, Glass RI, Woods P, Taniguchi K, Clark HF, Forrester B, Fang ZY: Polymerase chain reaction amplification and typing of rotavirus nucleic acid from stool specimens. J Clin Microbiol 28: 276-282, 1990.
15. Griffin DD, Kirkwood CD, Parashar UD, Woods PA, Bresee JS, Glass RI, Genttsch JR: Surveillance of rotavirus strains in the United States: identification of unusual strains. J Clin Microbiol 38: 2784-2787, 2000.
16. Gulati BR, Deepa R, Singh BK, Rao CD: Diversity in Indian equine rotaviruses; identification of genotype g10, p6[1] and g1 strains and a new VP7 genotype (g16) strain in specimens from diarrheic foals in India. J Clin Microbiol 45: 2354, 2007.
17. Iturriza-Gomara M, Green J, Brown DW, Ramsay M, Desselberger U, Gray JJ: Molecular epidemiology of human group A rotavirus infections in the United Kingdom between 1995 and 1998. J Clin Microbiol 38: 4394-4401, 2000.
18. Jain V, Das BK, Bhan MK Glass RI, Gentsch JR: Great diversity of group A rotavirus strains and high prevalence of mixed rotavirus infections in India. J Clin Microbiol 39: 3524-3529, 2001.
19. Kang JO, Kilgore P, Kim JS, Nyambat B, Kim JG, Suh HS, Yoon YM, Jang SJ, Chang CH, Choi SW, Kim MN, Gentsch J, Bresee J, Glass R: Molecular epidemiological profile of rotavirus in South Korea, July 2002 through June 2003: Emergence of G4P[6] and G9P[8] strains. JID 192 (Suppl 12): S57-S63, 2005.
20. Khamrin P, Maneekarn N, Peerakome S, Chan-it W, Yagyu F, Okitsu S, Ushijima H: Novel porcine rotavirus of genotype P[27] shares new phylogenetic lineage with G2 porcine rotavirus strain. Virology 361: 243-252, 2007.
21. Kim JS, Kang JO, Cho SC, Jang YT, Min SA, Park TH, Nyambat B, Jo DS, Gentsch J, Bresee JS, Mast TC, Kilgore PE: Epidemiological profile of rotavirus infection in the Republic of Korea: results from prospective surveillance in the Jeongeub district, 1 July 2002 through 30 June 2004. JID 192(Suppl 1): S49-S56, 2005.
22. Kirkwood CD, Palombo EA: Genetic characterization of the rotavirus nonstructural protein, NSP4. Virology 236: 258-265, 1997.
23. Lee JS, Kim HH: Clinical study of acute diarrhea in infants and children. J Korean Pediatr Soc 20: 30-46, 1977.
24. Martella V, Ciarlet M, Bányai K, Lorusso E, Arista S, Lavazza A, Pezzotti G Decaro N, Cavalli A, Lucente MS, Corrente M, Elia G, Camero M, Tempesta M, Buonavoglia C: Identification of group A porcine rotavirus strains bearing a novel VP4 (P) Genotype in Italian swine herds. J Clin Microbiol 45: 577-580, 2007.
25. Min BS, Noh YJ, Shin JH, Baek SY, Kim JO, Min KI, Ryu SR, Kim BG, Kim DK, Lee SH, Min HK, Ahn BY, Park SN: Surveillance study (2000 to 2001) of G- and P-type human rotavirus circulating in South Korea. J Clin Microbiol 42: 4297-4299, 2004.
26. Murphy TV, Gargiullo PM, Massoudi MS, Nelson DB, Jumaan AO, Okoro CA, Zanardi LR, Setia S, Fair E., LeBaron CW, Wharton M, Livinggood JR: Susception among infants given an oral rotavirus vaccine. N Engl J Med 344: 564-572, 2001.
27. Nguyen TV, Van PL, Huy CL, Weintraub A: Diarrhea caused by rotavirus in children less than 5 years of age in Hanoi, Vietnam. J Clin Microbiol 42: 5745-5750, 2004.
28. Palombo EA, Masendyca PJ, Bugg HC, Bogdanovic S, Akran N, Barnes GL, Bishop RF: Emergence of serotype G9 human rotavirus in Australia. J Clin Microbiol 38: 1305-1306, 2000.
29. Park HK, Woo SV, Seoh JU, Chong YH, Seo JW: VP7 genotypes of diarrhea by reverse transcription-polymerase chain reaction. J Korean Soc Microbiol, 32: 675-683, 1997.
30. Rácz ML, Kroeff SS, Munford V, Caruzo TAR, Durigon EL, Hayashi Y, Gouvea V, Palombo EA: Molecular characterization of porcine rotaviruses from the southern region of Brazil: characterization of an atypical genotype G[9] strain. J Clin Microbiol 38: 2443-2446, 2000.
31. Sato T, Suzuki H, Kitaoka S: Patterns of polypeptide synthesis in human rotavirus infected cell. Arch Virol 90: 29-40, 1986.
32. Seo JK, Sim JG: Overview of rotavirus infection in Korea. Pediat Internat 42: 406-410, 2000.
33. Steyer A, Poljsak-Prijatelj M, Barlic-Maganja D, Jamnikar U, Mijovski JZ, Marin J: Molecular characterization of a new porcine rotavinis P genotype found in an asymptomatic pig in Slovenia. Virology 359: 275-282, 2007.
34. Unicomb LE, Podder G, Gentsch JR, Woods PA, Hasan KZ, Faruque AS, Albert MJ, Glass RI: Evidence of high-frequency genomic reassortment group A strain Bangladesh emergence of type G9 in 1995. J Clin Microbial 37: 1885-1991, 1999.
35. Zhou Y, NaKayama M, Hasegawa A: Serotypes of humman rotaviruses in 7 regions of Japan from 1984 to 1997. Kansenshogaku Zasshi 73: 35-42, 1999.