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Volumn 24, Issue 7, 2008, Pages 927-935

Phylogenetic analysis of cyanobacterial strains of genus-Calothrix by single and multiplex randomly amplified polymorphic DNA-PCR

Author keywords

Cluster analysis; Cyanobacteria; Divergence; Multiplex RAPD; Phylogenetic relatedness

Indexed keywords

CHLOROPHYLL; CORRELATION METHODS; COSMIC RAYS; DIFFERENTIATION (CALCULUS); DNA; DNA SEQUENCES; GENES; MULTIPLEXING; NUCLEIC ACIDS; ORGANIC ACIDS; PORPHYRINS; RANGE FINDING;

EID: 44649137938     PISSN: 09593993     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11274-007-9569-2     Document Type: Article
Times cited : (9)

References (34)
  • 1
    • 0026675742 scopus 로고
    • DNA diversity among clinical isolates of Helocobacter pylori detected by PCR-based RAPD-fingerprinting
    • Akopyanz N, Bukanov NO, Westblom TU, Kresovich S, Berg DE (1992) DNA diversity among clinical isolates of Helocobacter pylori detected by PCR-based RAPD-fingerprinting. Nucl Acids Res 20:5137-5142
    • (1992) Nucl Acids Res , vol.20 , pp. 5137-5142
    • Akopyanz, N.1    Bukanov, N.O.2    Westblom, T.U.3    Kresovich, S.4    Berg, D.E.5
  • 2
    • 0033039480 scopus 로고    scopus 로고
    • Genetic diversity within Lactobacillus sakei and Lactobacillus curvatus and design of PCR primers for its detection using randomly amplified polymorphic DNA
    • Berthier F, Ehrlich DS (1999) Genetic diversity within Lactobacillus sakei and Lactobacillus curvatus and design of PCR primers for its detection using randomly amplified polymorphic DNA. Int J Syst Bacteriol 49:997-1007
    • (1999) Int J Syst Bacteriol , vol.49 , pp. 997-1007
    • Berthier, F.1    Ehrlich, D.S.2
  • 4
    • 0342683835 scopus 로고    scopus 로고
    • Identification and phylogenetic analysis of Lactobacillus using multiplex RAPD-PCR
    • Daud Khaled AK, Neilan BA, Henriksson A, Conway PI (1997) Identification and phylogenetic analysis of Lactobacillus using multiplex RAPD-PCR. FEMS Microbiol Lett 153:191-197
    • (1997) FEMS Microbiol Lett , vol.153 , pp. 191-197
    • Daud Khaled, A.K.1    Neilan, B.A.2    Henriksson, A.3    Conway, P.I.4
  • 5
    • 0004190347 scopus 로고
    • Indian Council of Agricultural Research, New Delhi, India
    • Desikachary TV (1959) Cyanophyta, Indian Council of Agricultural Research, New Delhi, India
    • (1959) Cyanophyta
    • Desikachary, T.V.1
  • 6
    • 84986841647 scopus 로고    scopus 로고
    • Properties of Microcystis aeruginosa and M. flos-aquae (Cyanophyta) in culture: Taxonomic implications
    • Doers MP, Parker DL (1998) Properties of Microcystis aeruginosa and M. flos-aquae (Cyanophyta) in culture: taxonomic implications. J Phycol. 24:502-508
    • (1998) J Phycol. , vol.24 , pp. 502-508
    • Doers, M.P.1    Parker, D.L.2
  • 8
    • 0029019748 scopus 로고
    • Generation of DNA-based markers in specific genome regions by two-primer RAPD reactions
    • Hu J, Van Eysden J, Quiros CF (1995) Generation of DNA-based markers in specific genome regions by two-primer RAPD reactions. PCR Meth Appl 4:346-351
    • (1995) PCR Meth Appl , vol.4 , pp. 346-351
    • Hu, J.1    Van Eysden, J.2    Quiros, C.F.3
  • 10
    • 0043199577 scopus 로고    scopus 로고
    • Phylogenetic analysis of symbiotic and free-living cyanobacterial cultures using DNA amplification fingerprinting
    • Jeberlin Prabina B, Kumar K, Kannaiyan S (2003) Phylogenetic analysis of symbiotic and free-living cyanobacterial cultures using DNA amplification fingerprinting. Indian J Exp Biol 41:865-869
    • (2003) Indian J Exp Biol , vol.1 , pp. 865-869
    • Jeberlin Prabina, B.1    Kumar, K.2    Kannaiyan, S.3
  • 11
    • 22144495221 scopus 로고
    • Allozyme divergence of Microcystis strains from Lake Kasumigaura
    • Tsukuba
    • Kato T, Watanabe M (1993) Allozyme divergence of Microcystis strains from Lake Kasumigaura. Proceedings: International Phycology Forum, Tsukuba, pp 1-73
    • (1993) Proceedings: International Phycology Forum , pp. 1-73
    • Kato, T.1    Watanabe, M.2
  • 12
    • 0001155012 scopus 로고
    • A review of water-bloom forming Microcystis species, with regard to population in Japan
    • Komarek J (1991) A review of water-bloom forming Microcystis species, with regard to population in Japan. Arch Hydrobiol Supply 64:115-127
    • (1991) Arch Hydrobiol Supply , vol.64 , pp. 115-127
    • Komarek, J.1
  • 14
    • 0030470847 scopus 로고    scopus 로고
    • Dispersal of freshwater algae-a review
    • Kristiansen J (1996b) Dispersal of freshwater algae-a review. Hydrobiologia 336:151-157
    • (1996) Hydrobiologia , vol.336 , pp. 151-157
    • Kristiansen, J.1
  • 15
    • 0028120677 scopus 로고
    • Identification and inter-relationship analysis of Bradyrhizobium japonicum strains by restriction fragment length polymorphism (RFLP) and random amplified polymorphic DNA (RAPD)
    • Lunge VR, Ikuta N, Fonseca ASK, Hirigoyen D, Stoll M, Bonatto S, Ozaki LS (1994) Identification and inter-relationship analysis of Bradyrhizobium japonicum strains by restriction fragment length polymorphism (RFLP) and random amplified polymorphic DNA (RAPD). World J Microbiol Biotechnol 10:648-652
    • (1994) World J Microbiol Biotechnol , vol.10 , pp. 648-652
    • Lunge, V.R.1    Ikuta, N.2    Fonseca, A.S.K.3    Hirigoyen, D.4    Stoll, M.5    Bonatto, S.6    Ozaki, L.S.7
  • 16
    • 0000411157 scopus 로고
    • Absorption of light by chlorophyll solutions
    • Mckinney G (1941) Absorption of light by chlorophyll solutions. J Biol Chem 140:315-322
    • (1941) J Biol Chem , vol.140 , pp. 315-322
    • McKinney, G.1
  • 17
    • 0023461268 scopus 로고
    • Specific synthesis of DNA in vitro via a polymerase-catalyzed chain reaction
    • Mullis KB, Faloona FA (1987) Specific synthesis of DNA in vitro via a polymerase-catalyzed chain reaction. Meth Enzymol 155:335-350
    • (1987) Meth Enzymol , vol.155 , pp. 335-350
    • Mullis, K.B.1    Faloona, F.A.2
  • 18
    • 0029050366 scopus 로고
    • Identification and phylogenetic analysis of toxigenic cyanobacteria by multiplex randomly amplified polymorphic DNA PCR
    • Neilan BA (1995) Identification and phylogenetic analysis of toxigenic cyanobacteria by multiplex randomly amplified polymorphic DNA PCR. Appl Environ Microbiol 61:2286-2291
    • (1995) Appl Environ Microbiol , vol.61 , pp. 2286-2291
    • Neilan, B.A.1
  • 19
    • 0031180317 scopus 로고    scopus 로고
    • Random amplified polymorphic DNA (RAPD) analysis for discriminating genotypes of Microcystis cyanobacteria
    • Nishihara H, Miwa H, Watanabe M, Nagashima M, Yagi O, Takamura Y (1997) Random amplified polymorphic DNA (RAPD) analysis for discriminating genotypes of Microcystis cyanobacteria. Biosci Biotechnol Biochem 61:1067-1070
    • (1997) Biosci Biotechnol Biochem , vol.61 , pp. 1067-1070
    • Nishihara, H.1    Miwa, H.2    Watanabe, M.3    Nagashima, M.4    Yagi, O.5    Takamura, Y.6
  • 20
  • 24
    • 85040801929 scopus 로고
    • Cambridge University Press Cambridge
    • Round FE (1981) The ecology of algae. Cambridge University Press. Cambridge, pp 1-653
    • (1981) The Ecology of Algae , pp. 1-653
    • Round, F.E.1
  • 25
    • 0023375195 scopus 로고
    • The neighbour-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M (1987) The neighbour-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 26
    • 0031791462 scopus 로고    scopus 로고
    • A PCR technique based on Hip1 interspersed repetitive sequence distinguishes cyanobacterial species and strains
    • Smith JK, Parry JD, Day JG, Smith RJ (1998) A PCR technique based on Hip1 interspersed repetitive sequence distinguishes cyanobacterial species and strains. Microbiology 144:2791-2801
    • (1998) Microbiology , vol.144 , pp. 2791-2801
    • Smith, J.K.1    Parry, J.D.2    Day, J.G.3    Smith, R.J.4
  • 27
    • 0015076683 scopus 로고
    • Purification and properties of unicellular blue-green algae (order Chroococcales)
    • Stanier RY, Kunisawa R, Mandel M, Cohen-Bazire G (1971) Purification and properties of unicellular blue-green algae (order Chroococcales). Bacteriol Rev 35:171-205
    • (1971) Bacteriol Rev , vol.35 , pp. 171-205
    • Stanier, R.Y.1    Kunisawa, R.2    Mandel, M.3    Cohen-Bazire, G.4
  • 29
    • 0029240372 scopus 로고
    • Use of RAPD for the study of diversity within plant germplasm collections
    • Virk PS, Ford-Lloyd BV, Jackson MT, Newbury HJ (1995) Use of RAPD for the study of diversity within plant germplasm collections. Heredity 74:170-179
    • (1995) Heredity , vol.74 , pp. 170-179
    • Virk, P.S.1    Ford-Lloyd, B.V.2    Jackson, M.T.3    Newbury, H.J.4
  • 30
    • 0000102729 scopus 로고
    • Subsection I. Order chroococcales
    • Buchanan RE, Gibbons NE (eds) Baltimore: Williams and Wilkins
    • Waterbury JB, Rippka R (1989) Subsection I. order chroococcales. In Buchanan RE, Gibbons NE (eds) Berger's manual of systematic bacteriology. 3rd edn, Baltimore: Williams and Wilkins, pp 1728-1745
    • (1989) Berger's Manual of Systematic Bacteriology. 3rd Edn , pp. 1728-1745
    • Waterbury, J.B.1    Rippka, R.2
  • 32
    • 0025633560 scopus 로고
    • Fingerprinting genomes using PCR with arbitrary primers
    • Welsh J, McClelland M (1990) Fingerprinting genomes using PCR with arbitrary primers. Nucl Acids Res 18:7213-7218
    • (1990) Nucl Acids Res , vol.18 , pp. 7213-7218
    • Welsh, J.1    McClelland, M.2
  • 34
    • 0023184331 scopus 로고
    • Bacterial evolution
    • Woese CR (1987) Bacterial evolution. Microbiol Res 51:221-271
    • (1987) Microbiol Res , vol.51 , pp. 221-271
    • Woese, C.R.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.