Estimating in situ phytoplankton growth rates with a Lagrangian sampling strategy

Limnology and Oceanography: Methods

Volumn 5, Issue 12, 2007, Pages 495-509

  Hillmer, Ingrid ^a,b   Imberger, Jörg ^a  

^a UNIVERSITY OF WESTERN AUSTRALIA   (Australia)

^b UNIVERSITY OF CHILE   (Chile)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 44649128562     PISSN: None     EISSN: 15415856     Source Type: Journal    
DOI: 10.4319/lom.2007.5.495     Document Type: Article

References (59)

1. Broenkow, W. W. 1965. The distribution of nutrients in the Costa Rica dome in the eastern tropical Pacific Ocean. Limnol. Oceanogr. 10:40-52.
2. Caraco, N. F., J. J. Cole, and G. E. Likens. 1992. New and recycled primary production in an oligotrophic lake: Insights for summer phosphorus dynamics. Limnol. Oceanogr. 37:590-602.
3. Carignan, R. 1998. Automated determination of carbon dioxide, oxygen, and nitrogen partial pressures in surface waters. Limnol. Oceanogr. 43:969-975.
4. Coale, K. H., K. S. Johnson, S. E. Fitzwater, S. P. G. Blain, T. P. Stanton, and T. L. Coley. 1998. IronEx-I, an in situ ironenrichment experiment: Experimental design, implementation and results. Deep-Sea Research II 45:919-945.
5. Cole, J. J., M. L. Pace, S. R. Carpenter, and J. F. Kitchell. 2000. Persistence of net heterotrophy in lakes during nutrient addition and food web manipulations. Limnol. Oceanogr. 45:1718-1730.
6. D'Avanzo, C., J. W. Kremer, and S. C. Wainright. 1995. Ecosystem production and respiration in response to eutrophication in shallow temperature estuaries. Mar. Ecol. Progr. Ser. 69:51-54.
7. Dortch, Q., and J. R. Postel. 1989. Biochemical indicators of N utilization by phytoplankton during upwelling off the Washington coast. Limnol. Oceanogr. 34:738-773.
8. Duarte, C. M. 1990. Time lags in algal growth: generality, causes, and consequences. Journal of Plankton Research. 12:873-883.
9. Dutilleul, P. 1993. Spatial heterogeneity and the design of ecological field experiment. Ecology. 74:1646-1658.
10. Eppley, R. W., J. N. Rogers, and J. J. McCarthy. 1969. Half-saturation constants for uptake of nitrate and ammonium by marine phytoplankton. Limnol. Oceanogr. 14:912-920.
11. Fischer, H. B., E. J. List, R. C. Y. Koh, J. Imberger, and N. H. Brooks. 1979. Mixing in inland and coastal waters. Academic. Gallegos C. L. and W. N. Vant. 1996. An incubation procedure for estimating carbon-to-chlorophyll ratios and growthirradiance relationships of estuarine phytoplankton. Mar. Ecol. Progr. Ser. 38:275-291.
12. Genin, A., G. Yahel, M. A. Reidenbach, S. G. Monismith, and J. R. Koseff. 2002. Intense benthic grazing on phytoplankton in coral reefs revealed using the control volume approach. Oceanography 15:90-96.
13. Greenberg, A. E., L. S. Clesceri, and A. D. Eaton [Eds.]. 1992. Standard methods for the examination of water and wastewater. American Public Health Association.
14. Gribsholt, B., and others. 2005. Nitrogen processing in a tidal freshwater marsh: a whole-ecosystem 15N labeling study. Limnol. Oceanogr. 50:1945-1959.
15. Harris, G.P. 1980. The measurement of photosynthesis in natural populations of phytoplankton, p: 129-187. In I. Morris [Eds.], The physiological ecology of phytoplankton. University of California Press, California.
16. Hillmer, I., and J. Imberger. 2007 Influence of advection on scales of ecological studies in a coastal equilibrium flow. Continental Shelf Research 27:134-153.
17. Howarth, R. W., R. Marino, and J. Lane. 1988. Nitrogen fixation in freshwater, estuarine, and marine ecosystems. 1. Rates and importance. Limnol. Oceanogr. 33: 669-687.
18. Imberger, J., T. Berman, R. R. Christian, E. B. Sherr, D. E. Whitney, L. R. Pomeroy, R. G. Wiegert, and W. J. Wiebe. 1983. The influence of water motion on the distribution and transport of materials in a salt marsh estuary. Limnol. Oceanogr. 28:201-214.
19. Imberger, J., and G. N. Ivey. 1991.On the nature of turbulence in stratified fluid. Part II: Application to lakes. Journal of Physical Oceanography. 21:659-679.
20. Ivey, G. N., and J. Imberger. 1991.On the nature of turbulence in stratified fluid. Part I: The energetics of mixing. Journal of Physical Oceanography. 21:650-658.
21. Johnson, K. S. 1983. Determination of nitrate and nitrite in seawater by flow injection analysis with injection of reagent. Limnol. Oceanogr. 28:1260-1266.
22. Johannes, R. E., and C. J. Hearn. 1985. The effect of submarine groundwater discharge on nutrient and salinity regimes in a coastal lagoon of Perth, Western Australia. Estuarine, Coastal and Shelf Science. 21:789-800.
23. Jorgensen, S. E., S. N. Nielsen, and L. A. Jorgensen. 1991. Handbook of ecological parameters and ecotoxicology. Elsevier, Amsterdam. Ketchum, B. H., and N. Corwin. 1965. The cycle of phosphorus in a plankton bloom in the Gulf of Maine. Limnol. Oceanogr. 10:148-161.
24. Kiefer, D. A., W. S. Chamberlin, and C. R. Booth. 1989. Natural fluorescence of chlorophyll a: Relationship to photosynthesis and chlorophyll concentration in the western South Pacific gyre. Limnol. Oceanogr. 34:868-881.
25. Kirchman, D. L. 2002. Calculating microbial growth rates from data on production and standing stocks. Mar. Ecol. Prog. Ser. 233:303-306.
26. Kraines, S., Y. Suzuki, K. Yamada, and H. Komiyama. 1996. Separating biological and physical changes in dissolved oxygen concentration in a coral reef. Limnol. Oceanogr. 41:1790-1799.
27. Kolber, Z., and P. G. Falkowski. 1993. Use of active fluorescence to estimate phytoplankton photosynthesis in situ. Limnol. Oceanogr. 38:1646-1665.
28. Lord, D. A. 2000. Perth long-term Ocean Outlet Monitoring (PLOOM) programme. 1995-2000; Summary Report. The Water Corporation.
29. Lorenzen, J. 1963. Diurnal variations in photosynthetic activity of natural phytoplankton populations. Limnol. Oceanogr. 8:56-62.
30. Luketina, D. A., and J. Imberger. 2001. Determining turbulent kinetic energy dissipation from the Batchelor curve fitting. Journal of atmospheric and oceanic technology. 18: 100-113.
31. Marañón, E. 2005. Phytoplankton growth rates in the Atlantic subtropical. Limnol. Oceanogr. 50:299-310.
32. Marra, J. 1978a. Effect of short-term variations in light intensity on photosynthesis of a marine phytoplankter: a laboratory simulation study. Marine Biology 46:191-202.
33. Marra, J. 1978b. Phytoplankton photosynthetic response to vertical movement in mixed layer. Marine Biology 46: 203-208.
34. Marra, J. 1980. Vertical mixing and primary production, p. 121-137. In P.G. Falkowski [Ed.], Primary productivity in the sea. Plenum Publishing Corp.
35. Melack, J.M. 1982. Photosynthetic activity and respiration in an equatorial African Soda Lake. Freshwat. Biol. 12: 381-399.
36. Minas, H. J., M. Minas, and T. T. Packard. 1986. Productivity in upwelling areas deduced from hydrographic and chemical fields. Limnol. Oceanogr. 31:1182-1206.
37. Odum, H. T. 1956. Primary production in flowing waters. Limnol. Oceanogr. 1:102-117.
38. Osborn, T. R. 1980. Estimates of the rate of the vertical diffusion from dissipation measurements. J. Phys. Oceanogr. 10: 83-89.
39. Pace, M.L., and J.J. Cole. 1996. Regulation of bacteria by resources and predation tested in whole-lake experiments. Limnol. Oceanogr. 41:1448-1460.
40. Park, G., and others. 2005. A sulfur hexafluoride-based Lagrangian study on initiation and accumulation of the red tide Cochlodinium polykrikoides in southern coastal waters of Korea. Limnol. Oceanogr. 50:578-586.
41. Pattiaratchi, C.B., and C. Knock. 1995. Perth coastal waters study. Physical measurements. Project P2. Report to Water Authority of Western Australia. University of Western Australia.
42. Platt, T., and K.L. Denman. 1975. Spectral analysis in ecology. Annual Review of Ecology and Systematics. 6:189-210.
43. Redfield, B., H. Ketchum, and F.A. Richards. 1963. The influence of organisms on the composition of sea-water, p. 26-77. In M. N. Hill, E. D. Goldberg, C. O'D. Iselin, and W. H. Munk [Eds.], The Sea. Interscience.
44. Ryther, J. H. 1956. The measurement of primary production. Limnol. Oceanogr. 1:72-84.
45. Sietzinger, S. 1988. Denitrification in freshwater and coastal marine ecosystems: ecological and geochemical significance. Limnol. Oceanogr. 33:702-724.
46. Smith, S.V. 1984. Phosphorus versus nitrogen limitation in the marine environment. Limnol. Oceanogr. 29:1149-1160.
47. Smith, S.V., and M.J. Atkinson 1983. Mass balance of carbon and phosphorus in Shark Bay, Western Australia. Limnol. Oceanogr. 28:625-639.
48. Smith, S.V., and M.J. Atkinson 1984. Phosphorus limitation of net production in a confined aquatic ecosystem. Nature. 307: 626-627.
49. Stocker, R., and J. Imberger. 2003. Horizontal transport and dispersion in the surface layer of a medium-sized lake. Limnol. Oceanogr. 48:971-982.
50. Strickland, J. D. H., and T. R. Parson. 1972. A practical handbook of seawater analysis. Fishery Research Board, Canada.
51. Switala, K. 1993. Determination of ammonia by flow injection analysis colorimetry (dialysis). Latchet Instruments, Milwaukee, USA.
52. Thingstad, T. F., and others. 2005. Nature of P limitation in the ultraoligotrophic Eastern Mediterranean. Science 309: 1068-1071.
53. Thompson, P., and A. Waite. 2003. Phytoplankton responses to wastewater discharges at two sites in Western Australia. Marine and Freshwater Research. 54:721-735.
54. Tobias, C.R., M. Cieri, B. J. Peterson, L. A. Deegan, J. Vallino, and J. Hughes. 2003. Processing watershed-derived nitrogen in a well-flushed New England estuary. Limnol. Oceanogr. 48:1766-1778.
55. Utermöhl, H. 1958. Zur vervoilkommnung der quantitativen phytoplankton-methodik. Mitt. lnt. Ver. Limnol. 9. 38 pp.
56. Valderrama, J. 1981. The simultaneous analysis of total nitrogen and total phosphorus in natural waters. Marine Chemistry. 10:109-122.
57. Wanninkhof, R., and others. 1997. Gas exchange, dispersion, and biological productivity on the west Florida shelf: Results from a Lagrangian tracer study. Geophysical Research Letters 24:1767-1770.
58. Wetzel. R. 2001. Limnology and lake and river systems. 3rd ed. Academic Press London.
59. Zaker, N. 1998. Dynamics of the coastal boundary layer off Perth, Western Australia. PhD thesis, Univ. of Western Australia