메뉴 건너뛰기




Volumn 15, Issue 9, 2004, Pages 1354-1359

Comparative stability determination of oligonucleotide duplexes in gas and solution phase

Author keywords

[No Author keywords available]

Indexed keywords

COLLISION ENERGY; SOLUTION STABILITY;

EID: 4444354596     PISSN: 10440305     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jasms.2004.06.008     Document Type: Article
Times cited : (10)

References (33)
  • 2
    • 0030621966 scopus 로고    scopus 로고
    • Studying Noncovalent Protein Complexes by Electrospray Ionization Mass Spectrometry
    • J.A. Loo Studying Noncovalent Protein Complexes by Electrospray Ionization Mass Spectrometry Mass Spectrom. Rev. 16 1997 1 23
    • (1997) Mass Spectrom. Rev. , vol.16 , pp. 1-23
    • Loo, J.A.1
  • 3
    • 0035241691 scopus 로고    scopus 로고
    • Analysis of Noncovalent Complexes of DNA and RNA by Mass Spectrometry
    • S.A. Hofstadler, R.H. Griffey Analysis of Noncovalent Complexes of DNA and RNA by Mass Spectrometry Chem. Rev. 101 2001 377 390
    • (2001) Chem. Rev. , vol.101 , pp. 377-390
    • Hofstadler, S.A.1    Griffey, R.H.2
  • 5
    • 0027457455 scopus 로고
    • Detection of Oligonucleotide Duplex Forms by Ionspray Mass Spectrometry
    • B. Ganem Detection of Oligonucleotide Duplex Forms by Ionspray Mass Spectrometry Tetrahedron Lett. 34 1993 1445 1448
    • (1993) Tetrahedron Lett. , vol.34 , pp. 1445-1448
    • Ganem, B.1
  • 6
    • 0028447406 scopus 로고
    • Observation of Duplex DNA-Drug Noncovalent Complexes by Electrospray Ionization Mass Spectrometry
    • D.C. Gale, D.R. Goodlett, K.J. Light-Wahl, R.D. Smith Observation of Duplex DNA-Drug Noncovalent Complexes by Electrospray Ionization Mass Spectrometry J. Am. Chem. Soc. 116 1994 6027 6028
    • (1994) J. Am. Chem. Soc. , vol.116 , pp. 6027-6028
    • Gale, D.C.1    Goodlett, D.R.2    Light-Wahl, K.J.3    Smith, R.D.4
  • 7
    • 0028774392 scopus 로고
    • Accumulation and Storage of Ionized Duplex DNA Molecules in a Quadrupole Ion Trap
    • M.J. Doktycz, S. Habibi-Goudarzi, S.A. McLuckey Accumulation and Storage of Ionized Duplex DNA Molecules in a Quadrupole Ion Trap Anal. Chem. 66 1994 3416 3422
    • (1994) Anal. Chem. , vol.66 , pp. 3416-3422
    • Doktycz, M.J.1    Habibi-Goudarzi, S.2    McLuckey, S.A.3
  • 8
    • 0027985482 scopus 로고
    • Analysis of Double Stranded Oligonucleotides by Electrospray Mass Spectrometry
    • E. Bayer, T. Bauer, K. Schmeer, K. Bleicher, M. Maier, H. Gaus Analysis of Double Stranded Oligonucleotides by Electrospray Mass Spectrometry Anal. Chem. 66 1994 3858 3863
    • (1994) Anal. Chem. , vol.66 , pp. 3858-3863
    • Bayer, E.1    Bauer, T.2    Schmeer, K.3    Bleicher, K.4    Maier, M.5    Gaus, H.6
  • 9
    • 0001732585 scopus 로고
    • Specific and Nonspecific Dimer Formation in the Electrospray Ionization Mass Spectometry of Oligonucleotides
    • J. Ding, R.J. Anderegg Specific and Nonspecific Dimer Formation in the Electrospray Ionization Mass Spectometry of Oligonucleotides J. Am. Soc. Mass Spectrom. 6 1995 159 164
    • (1995) J. Am. Soc. Mass Spectrom. , vol.6 , pp. 159-164
    • Ding, J.1    Anderegg, R.J.2
  • 10
    • 0000403647 scopus 로고
    • Characterization of Noncovalent Complexes Formed between Minor Groove Binding Molecules and Duplex DNA by Electrospray Ionization Mass Spectrometry
    • D.C. Gale, R.D. Smith Characterization of Noncovalent Complexes Formed Between Minor Groove Binding Molecules and Duplex DNA by Electrospray Ionization Mass Spectrometry J. Am. Soc. Mass Spectrom. 6 1995 1154 1164
    • (1995) J. Am. Soc. Mass Spectrom. , vol.6 , pp. 1154-1164
    • Gale, D.C.1    Smith, R.D.2
  • 11
    • 33846278908 scopus 로고    scopus 로고
    • New Mass Spectrometric Methods for the Study of Noncovalent Associations of Biopolymers
    • R.D. Smith, J.E. Bruce, Q. Wu, Q.P. Lei New Mass Spectrometric Methods for the Study of Noncovalent Associations of Biopolymers Chem. Soc. Rev. 6 1997 191 202
    • (1997) Chem. Soc. Rev. , vol.6 , pp. 191-202
    • Smith, R.D.1    Bruce, J.E.2    Wu, Q.3    Lei, Q.P.4
  • 12
    • 0030718606 scopus 로고    scopus 로고
    • Noncovalent Complexes between DNA-Binding Drugs and Double Stranded Deoxyoligonucleotides: A Study by Ion Spray Mass Spectrometry
    • A. Triolo, F.M. Arcamone, A. Raffaelli, P. Salvadori Noncovalent Complexes Between DNA-Binding Drugs and Double Stranded Deoxyoligonucleotides A Study by Ion Spray Mass Spectrometry J. Mass Spectrom. 32 1997 1186 1194
    • (1997) J. Mass Spectrom. , vol.32 , pp. 1186-1194
    • Triolo, A.1    Arcamone, F.M.2    Raffaelli, A.3    Salvadori, P.4
  • 13
    • 0032560994 scopus 로고    scopus 로고
    • Activation Energies for Dissociation of Double Strand Oligonucleotide Anions: Evidence for Watson-Crick Base Pairing in Vacuo
    • P.D. Schnier, J.S. Klassen, E.F. Strittmatter, E.R. Williams Activation Energies for Dissociation of Double Strand Oligonucleotide Anions Evidence for Watson-Crick Base Pairing in Vacuo J. Am. Chem. Soc. 120 1998 9605 9613
    • (1998) J. Am. Chem. Soc. , vol.120 , pp. 9605-9613
    • Schnier, P.D.1    Klassen, J.S.2    Strittmatter, E.F.3    Williams, E.R.4
  • 14
    • 0033404871 scopus 로고    scopus 로고
    • Interaction between Antitumor Drugs and a Double Stranded Oligonucleotide Studies by Electrospray Ionization Mass Spectrometry
    • V. Gabelica, E. De Pauw, F. Rosu Interaction Between Antitumor Drugs and a Double Stranded Oligonucleotide Studies by Electrospray Ionization Mass Spectrometry J. Mass Spectrom. 34 1999 1328 1337
    • (1999) J. Mass Spectrom. , vol.34 , pp. 1328-1337
    • Gabelica, V.1    De Pauw, E.2    Rosu, F.3
  • 15
    • 0034096809 scopus 로고    scopus 로고
    • Comparison between Solution Phase Stability and Gas Phase Kinetic Stability of Oligodeoxynucleotide Duplexes
    • V. Gabelica, F. Rosu, C. Houssier, E. De Pauw Comparison Between Solution Phase Stability and Gas Phase Kinetic Stability of Oligodeoxynucleotide Duplexes Rapid Commun. Mass Spectrom. 14 2000 464 467
    • (2000) Rapid Commun. Mass Spectrom. , vol.14 , pp. 464-467
    • Gabelica, V.1    Rosu, F.2    Houssier, C.3    De Pauw, E.4
  • 16
    • 0034478602 scopus 로고    scopus 로고
    • Gas Phase Stability of Double Stranded Oligodeoxynucleotides and Their Noncovalent Complexes with DNA-Binding Drugs as Revealed by Collisional Activation in an Ion Trap
    • K.X. Wan, M.L. Gross, T. Shibue Gas Phase Stability of Double Stranded Oligodeoxynucleotides and Their Noncovalent Complexes with DNA-Binding Drugs as Revealed by Collisional Activation in an Ion Trap J. Am. Soc. Mass Spectrom. 11 2000 450 457
    • (2000) J. Am. Soc. Mass Spectrom. , vol.11 , pp. 450-457
    • Wan, K.X.1    Gross, M.L.2    Shibue, T.3
  • 18
    • 0035046831 scopus 로고    scopus 로고
    • Comparison between Solution Phase Stability and Gas Phase Stability of Oligodeoxynucleotide Duplexes
    • V. Gabelica, E. De Pauw Comparison Between Solution Phase Stability and Gas Phase Stability of Oligodeoxynucleotide Duplexes J. Mass Spectrom. 36 2001 397 402
    • (2001) J. Mass Spectrom. , vol.36 , pp. 397-402
    • Gabelica, V.1    De Pauw, E.2
  • 20
    • 0026053768 scopus 로고
    • NMR and Molecular Modeling Evidence for a GA Mismatch Base Pair in a Purine Rich DNA Duplex
    • Y. Li, G. Zon, W.D. Wilson NMR and Molecular Modeling Evidence for a GA Mismatch Base Pair in a Purine Rich DNA Duplex Proc. Natl. Acad. Sci. U.S.A. 88 1991 26 30
    • (1991) Proc. Natl. Acad. Sci. U.S.A. , vol.88 , pp. 26-30
    • Li, Y.1    Zon, G.2    Wilson, W.D.3
  • 21
    • 0027146665 scopus 로고
    • 2 in Solution from NMR and Restrained Molecular Dynamics
    • 2 in Solution from NMR and Restrained Molecular Dynamics Biochemistry 32 1993 12612 12623
    • (1993) Biochemistry , vol.32 , pp. 12612-12623
    • Santalucia, J.1    Turner, D.H.2
  • 22
    • 0025082690 scopus 로고
    • Effects of GA Mismatches on the Structure and Thermodynamics of RNA Internal Loops
    • J. SantaLucia, R. Kierzek, D.H. Turner Effects of GA Mismatches on the Structure and Thermodynamics of RNA Internal Loops Biochemistry 29 1990 8813 8819
    • (1990) Biochemistry , vol.29 , pp. 8813-8819
    • Santalucia, J.1    Kierzek, R.2    Turner, D.H.3
  • 23
    • 0022423486 scopus 로고
    • Base-Base Mismatches. Thermodynamics of Double Helix Formation for dCA3XA3G + dCT3YT3G (X,Y = A,C,G,T)
    • F. Aboul-ela, D. Kohn, F. Martin, I. Tinoco Base-Base Mismatches. Thermodynamics of Double Helix Formation for dCA3XA3G + dCT3YT3G (X,Y = A,C,G,T) Nucleic Acids Res. 13 1985 4811 4824
    • (1985) Nucleic Acids Res. , vol.13 , pp. 4811-4824
    • Aboul-Ela, F.1    Kohn, D.2    Martin, F.3    Tinoco, I.4
  • 24
    • 0027956537 scopus 로고
    • A Major Family of Motifs Involving GA Mismatches in Ribosomal RNA
    • D. Gautheret, D. Konings, R.R. Gutell A Major Family of Motifs Involving GA Mismatches in Ribosomal RNA J. Mol. Biol. 242 1994 1 8
    • (1994) J. Mol. Biol. , vol.242 , pp. 1-8
    • Gautheret, D.1    Konings, D.2    Gutell, R.R.3
  • 25
    • 0031576896 scopus 로고    scopus 로고
    • Sheared Purine Pairing in Biology
    • S. Chou, L. Zhu, B.R. Reid Sheared Purine Pairing in Biology J. Mol. Biol. 267 1997 1055 1067
    • (1997) J. Mol. Biol. , vol.267 , pp. 1055-1067
    • Chou, S.1    Zhu, L.2    Reid, B.R.3
  • 28
    • 84985667623 scopus 로고
    • Stabilities of Nearest Neighbor Doublets in Double Helical DNA Determined by Fitting Calculated Melting Profiles to Observed Profiles
    • O. Gotoh, Y. Takashira Stabilities of Nearest Neighbor Doublets in Double Helical DNA Determined by Fitting Calculated Melting Profiles to Observed Profiles Biopolymers 20 1981 1033 1042
    • (1981) Biopolymers , vol.20 , pp. 1033-1042
    • Gotoh, O.1    Takashira, Y.2
  • 29
    • 0028928486 scopus 로고
    • Biomolecular Folding in Vacuo!!!(?)
    • P.G. Wolynes Biomolecular Folding In Vacuo!!!(?) Proc. Natl. Acad. Sci. U.S.A. 92 1995 2426 2427
    • (1995) Proc. Natl. Acad. Sci. U.S.A. , vol.92 , pp. 2426-2427
    • Wolynes, P.G.1
  • 31
    • 0026562625 scopus 로고
    • Context Dependence of Hydrogen Bond Free Energy Revealed by Substitutions in an RNA Hairpin
    • J. SantaLucia, R. Kierzek, D.H. Turner Context Dependence of Hydrogen Bond Free Energy Revealed by Substitutions in an RNA Hairpin Science 256 1992 217 219
    • (1992) Science , vol.256 , pp. 217-219
    • Santalucia, J.1    Kierzek, R.2    Turner, D.H.3
  • 32
    • 0028085964 scopus 로고
    • The Stability and Structure of Tandem GA Mismatches in RNA Depend on Closing Base Pairs
    • A.E. Walter, M. Wu, D.H. Turner The Stability and Structure of Tandem GA Mismatches in RNA Depend on Closing Base Pairs Biochemistry 33 1994 11349 11354
    • (1994) Biochemistry , vol.33 , pp. 11349-11354
    • Walter, A.E.1    Wu, M.2    Turner, D.H.3
  • 33
    • 0028344967 scopus 로고
    • Solution Structure of a GA Mismatch DNA Sequence, d(CCATGAATGG)2, Determined by 2D NMR and Structural Refinement Methods
    • K.L. Greene, R.L. Jones, Y. Li, H. Robinson, A.H. Wang, G. Zon, W.D. Wilson Solution Structure of a GA Mismatch DNA Sequence, d(CCATGAATGG)2, Determined by 2D NMR and Structural Refinement Methods Biochemistry 33 1994 1053 1062
    • (1994) Biochemistry , vol.33 , pp. 1053-1062
    • Greene, K.L.1    Jones, R.L.2    Li, Y.3    Robinson, H.4    Wang, A.H.5    Zon, G.6    Wilson, W.D.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.