3D-catFISH: A system for automated quantitative three-dimensional compartmental analysis of temporal gene transcription activity imaged by fluorescence in situ hybridization

Journal of Neuroscience Methods

Volumn 139, Issue 1, 2004, Pages 13-24

  Chawla, Monica K ^b   Lin, Gang ^a,b   Olson, Kathy ^b   Vazdarjanova, Almira ^b   Burke, Sara N ^b   McNaughton, Bruce L ^b   Worley, Paul F ^c   Guzowski, John F ^d   Roysam, Badrinath ^a   Barnes, Carol A ^b  

^a RENSSELAER POLYTECHNIC INSTITUTE   (United States)

^b Neural Systems   (United States)

^c JOHNS HOPKINS UNIVERSITY SCHOOL OF MEDICINE   (United States)

^d UNIVERSITY OF NEW MEXICO SCHOOL OF MEDICINE   (United States)

Author keywords

catFISH; Cell counting; Cell nuclei; Confocal microscopy; Image analysis; Segmentation

Indexed keywords

DYE;

ACCURACY; ALGORITHM; ARTICLE; AUTOANALYSIS; BRAIN REGION; CELL COUNT; CELLULAR DISTRIBUTION; COMPARTMENT MODEL; COMPUTER PROGRAM; CYTOPLASM; DATA ANALYSIS; DATA BASE; DNA DETERMINATION; EXPERT SYSTEM; FLUORESCENCE IN SITU HYBRIDIZATION; GENETIC TRANSCRIPTION; HIPPOCAMPUS; IMAGE ANALYSIS; PARIETAL LOBE; PRIORITY JOURNAL; RELIABILITY; SIGNAL NOISE RATIO; SIGNAL TRANSDUCTION; THREE DIMENSIONAL IMAGING; VALIDATION PROCESS;

ALGORITHMS; ANIMALS; HIPPOCAMPUS; IMAGING, THREE-DIMENSIONAL; IN SITU HYBRIDIZATION, FLUORESCENCE; MICROSCOPY, CONFOCAL; RATS; SOFTWARE; TIME FACTORS; TRANSCRIPTION, GENETIC;

EID: 4444340185     PISSN: 01650270     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jneumeth.2004.04.017     Document Type: Article

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